RNA–Protein interactions for RNA: ENST00000433822.1

COL17A1-204, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-204ENST00000433822 PRR27Q6MZM9 219 aa5.79□□□□□ -1.48
COL17A1-204ENST00000433822 GOLT1AQ6ZVE7 132 aa5.79□□□□□ -1.48
COL17A1-204ENST00000433822 KLHDC1Q8N7A1 406 aa5.79□□□□□ -1.48
COL17A1-204ENST00000433822 AJUBAQ96IF1 538 aa5.79□□□□□ -1.48
COL17A1-204ENST00000433822 RCHY1Q96PM5 261 aa5.79□□□□□ -1.48
COL17A1-204ENST00000433822 SLC50A1Q9BRV3 221 aa5.79□□□□□ -1.48
COL17A1-204ENST00000433822 RABAC1Q9UI14 185 aa5.79□□□□□ -1.48
COL17A1-204ENST00000433822 FBXL7Q9UJT9 491 aa5.79□□□□□ -1.48
COL17A1-204ENST00000433822 PSG8Q9UQ74 426 aa5.79□□□□□ -1.48
COL17A1-204ENST00000433822 LOC102724200A0A096LPH7 203 aaPredicted RBP5.78□□□□□ -1.48
COL17A1-204ENST00000433822 TRBV7-1A0A0A6YYK4 115 aa5.78□□□□□ -1.48
COL17A1-204ENST00000433822 SH2D7A6NKC9 451 aaPredicted RBP5.78□□□□□ -1.48
COL17A1-204ENST00000433822 F2Z2F3 143 aa5.78□□□□□ -1.48
COL17A1-204ENST00000433822 CTSGP08311 255 aa5.78□□□□□ -1.48
COL17A1-204ENST00000433822 C3orf79P0CE67 100 aa5.78□□□□□ -1.48
COL17A1-204ENST00000433822 FLNAP21333 2647 aaKnown RBP5.78□□□□□ -1.48
COL17A1-204ENST00000433822 ZFP36P26651 326 aaKnown RBP5.78□□□□□ -1.48
COL17A1-204ENST00000433822 BMI1P35226 326 aa5.78□□□□□ -1.48
COL17A1-204ENST00000433822 SLC35B1P78383 322 aa5.78□□□□□ -1.48
COL17A1-204ENST00000433822 LEMD1Q68G75 181 aa5.78□□□□□ -1.48
COL17A1-204ENST00000433822 DYNAPQ8N1N2 210 aa5.78□□□□□ -1.48
COL17A1-204ENST00000433822 OR2D3Q8NGH3 330 aa5.78□□□□□ -1.48
COL17A1-204ENST00000433822 ZNF502Q8TBZ5 544 aa5.78□□□□□ -1.48
COL17A1-204ENST00000433822 BORCS7Q96B45 105 aa5.78□□□□□ -1.48
COL17A1-204ENST00000433822 HIF1ANQ9NWT6 349 aa5.78□□□□□ -1.48
COL17A1-204ENST00000433822 PPP1R14DQ9NXH3 145 aa5.78□□□□□ -1.48
COL17A1-204ENST00000433822 ABCA1O95477 2261 aa5.78□□□□□ -1.48
COL17A1-204ENST00000433822 FBN1P35555 2871 aaKnown RBP5.77□□□□□ -1.49
COL17A1-204ENST00000433822 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.77□□□□□ -1.49
COL17A1-204ENST00000433822 IGHV3-21A0A0B4J1V1 117 aa5.77□□□□□ -1.49
COL17A1-204ENST00000433822 CENPVL3A0A0U1RRI6 287 aa5.77□□□□□ -1.49
COL17A1-204ENST00000433822 A0A1W2PPR1 153 aa5.77□□□□□ -1.49
COL17A1-204ENST00000433822 FAM223BA6NKX1 122 aa5.77□□□□□ -1.49
COL17A1-204ENST00000433822 NCBP2LA6PVI3 153 aaKnown RBP5.77□□□□□ -1.49
COL17A1-204ENST00000433822 ZNF785A8K8V0 405 aa5.77□□□□□ -1.49
COL17A1-204ENST00000433822 H3BUA1 57 aa5.77□□□□□ -1.49
COL17A1-204ENST00000433822 CHEK1O14757 476 aa5.77□□□□□ -1.49
COL17A1-204ENST00000433822 SPINK4O60575 86 aa5.77□□□□□ -1.49
COL17A1-204ENST00000433822 LY6HO94772 140 aa5.77□□□□□ -1.49
COL17A1-204ENST00000433822 APELAP0DMC3 54 aa5.77□□□□□ -1.49
COL17A1-204ENST00000433822 BTF3P20290 206 aaKnown RBP5.77□□□□□ -1.49
COL17A1-204ENST00000433822 CDKN1AP38936 164 aa5.77□□□□□ -1.49
COL17A1-204ENST00000433822 PAX8Q06710 450 aa5.77□□□□□ -1.49
COL17A1-204ENST00000433822 KIAA1644Q3SXP7 199 aa5.77□□□□□ -1.49
COL17A1-204ENST00000433822 Q56UQ5 140 aa5.77□□□□□ -1.49
COL17A1-204ENST00000433822 C19orf54Q5BKX5 351 aa5.77□□□□□ -1.49
COL17A1-204ENST00000433822 TCF24Q7RTU0 167 aa5.77□□□□□ -1.49
COL17A1-204ENST00000433822 PRNTQ86SH4 94 aa5.77□□□□□ -1.49
COL17A1-204ENST00000433822 FAM223AQ8IWN6 122 aa5.77□□□□□ -1.49
COL17A1-204ENST00000433822 EXOC3-AS1Q8N2X6 119 aa5.77□□□□□ -1.49
COL17A1-204ENST00000433822 ZC2HC1AQ96GY0 325 aa5.77□□□□□ -1.49
COL17A1-204ENST00000433822 CNFNQ9BYD5 112 aa5.77□□□□□ -1.49
COL17A1-204ENST00000433822 NPFFR1Q9GZQ6 430 aa5.77□□□□□ -1.49
COL17A1-204ENST00000433822 MEGF9Q9H1U4 602 aa5.77□□□□□ -1.49
COL17A1-204ENST00000433822 ZNF580Q9UK33 172 aa5.77□□□□□ -1.49
COL17A1-204ENST00000433822 C2orf70A6NJV1 201 aa5.76□□□□□ -1.49
COL17A1-204ENST00000433822 NPFFO15130 113 aa5.76□□□□□ -1.49
COL17A1-204ENST00000433822 SLPIP03973 132 aa5.76□□□□□ -1.49
COL17A1-204ENST00000433822 NUTF2P61970 127 aaKnown RBP5.76□□□□□ -1.49
COL17A1-204ENST00000433822 RELQ04864 619 aaPredicted RBP5.76□□□□□ -1.49
COL17A1-204ENST00000433822 SPATA12Q7Z6I5 190 aa5.76□□□□□ -1.49
COL17A1-204ENST00000433822 PGLYRP4Q96LB8 373 aa5.76□□□□□ -1.49
COL17A1-204ENST00000433822 FAM103A1Q9BTL3 118 aaKnown RBP5.76□□□□□ -1.49
COL17A1-204ENST00000433822 TMEM70Q9BUB7 260 aa5.76□□□□□ -1.49
COL17A1-204ENST00000433822 UQCR10Q9UDW1 63 aa5.76□□□□□ -1.49
COL17A1-204ENST00000433822 RPH3ALQ9UNE2 315 aa5.76□□□□□ -1.49
COL17A1-204ENST00000433822 U3KQK5 164 aa5.76□□□□□ -1.49
COL17A1-204ENST00000433822 AKAP6Q13023 2319 aa5.75□□□□□ -1.49
COL17A1-204ENST00000433822 TRAV8-1A0A0A6YYK1 113 aa5.75□□□□□ -1.49
COL17A1-204ENST00000433822 M0R2Z0 102 aa5.75□□□□□ -1.49
COL17A1-204ENST00000433822 BUB3O43684 328 aa5.75□□□□□ -1.49
COL17A1-204ENST00000433822 LINC00614P0C842 121 aa5.75□□□□□ -1.49
COL17A1-204ENST00000433822 SAA4P35542 130 aa5.75□□□□□ -1.49
COL17A1-204ENST00000433822 CAMPP49913 170 aa5.75□□□□□ -1.49
COL17A1-204ENST00000433822 CRIP1P50238 77 aa5.75□□□□□ -1.49
COL17A1-204ENST00000433822 KRTDAPP60985 99 aa5.75□□□□□ -1.49
COL17A1-204ENST00000433822 FAM120AOSQ5T036 256 aa5.75□□□□□ -1.49
COL17A1-204ENST00000433822 UNQ5815/PRO19632Q6UWF5 114 aa5.75□□□□□ -1.49
COL17A1-204ENST00000433822 C5orf56Q8N8D9 126 aa5.75□□□□□ -1.49
COL17A1-204ENST00000433822 EEF1AKMT3Q96AZ1 226 aa5.75□□□□□ -1.49
COL17A1-204ENST00000433822 PRR25Q96S07 402 aa5.75□□□□□ -1.49
COL17A1-204ENST00000433822 SNHG12Q9BXW3 62 aa5.75□□□□□ -1.49
COL17A1-204ENST00000433822 BPESC1Q9GZL8 116 aa5.75□□□□□ -1.49
COL17A1-204ENST00000433822 UBTD1Q9HAC8 227 aa5.75□□□□□ -1.49
COL17A1-204ENST00000433822 HSPB8Q9UJY1 196 aa5.75□□□□□ -1.49
COL17A1-204ENST00000433822 LAMTOR2Q9Y2Q5 125 aa5.75□□□□□ -1.49
COL17A1-204ENST00000433822 MOB4Q9Y3A3 225 aa5.75□□□□□ -1.49
COL17A1-204ENST00000433822 LENEPQ9Y5L5 61 aa5.75□□□□□ -1.49
COL17A1-204ENST00000433822 ARHGAP32A7KAX9 2087 aa5.75□□□□□ -1.49
COL17A1-204ENST00000433822 TRAV9-2A0A087WT02 112 aa5.74□□□□□ -1.49
COL17A1-204ENST00000433822 TMEM189A5PLL7 270 aa5.74□□□□□ -1.49
COL17A1-204ENST00000433822 ATP6V0E1O15342 81 aa5.74□□□□□ -1.49
COL17A1-204ENST00000433822 PPBPP02775 128 aa5.74□□□□□ -1.49
COL17A1-204ENST00000433822 IGF1P05019 195 aa5.74□□□□□ -1.49
COL17A1-204ENST00000433822 IGLC6P0CF74 106 aa5.74□□□□□ -1.49
COL17A1-204ENST00000433822 IGLC3P0DOY3 106 aa5.74□□□□□ -1.49
COL17A1-204ENST00000433822 PRB3Q04118 309 aaPredicted RBP5.74□□□□□ -1.49
COL17A1-204ENST00000433822 C15orf32Q32M92 178 aa5.74□□□□□ -1.49
COL17A1-204ENST00000433822 PSMG4Q5JS54 123 aa5.74□□□□□ -1.49
COL17A1-204ENST00000433822 PET117Q6UWS5 81 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms