RNA–Protein interactions for RNA: ENST00000429940.6

LINC00839-202, long intergenic non-protein coding RNA 839, humanhuman

TSL 2 BASIC

Gene LINC00839, Length 2,253 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00839-202ENST00000429940 SPTAN1Q13813 2472 aaKnown RBP11.72□□□□□ -0.53
LINC00839-202ENST00000429940 MYO18BQ8IUG5 2567 aa11.72□□□□□ -0.53
LINC00839-202ENST00000429940 OR9G4Q8NGQ1 327 aa11.72□□□□□ -0.53
LINC00839-202ENST00000429940 ZNF462Q96JM2 2506 aa11.72□□□□□ -0.53
LINC00839-202ENST00000429940 NPIPB5A8MRT5 1133 aa11.71□□□□□ -0.53
LINC00839-202ENST00000429940 IGHV3-23P01764 117 aa11.71□□□□□ -0.53
LINC00839-202ENST00000429940 CEACAM3P40198 252 aa11.71□□□□□ -0.53
LINC00839-202ENST00000429940 ZNF80P51504 273 aaPredicted RBP11.71□□□□□ -0.53
LINC00839-202ENST00000429940 HSD52Q0P140 79 aa11.71□□□□□ -0.53
LINC00839-202ENST00000429940 C5orf64Q2M2E5 130 aa11.71□□□□□ -0.53
LINC00839-202ENST00000429940 LY6G5BQ8NDX9 201 aa11.71□□□□□ -0.53
LINC00839-202ENST00000429940 C21orf62Q9NYP8 219 aa11.71□□□□□ -0.53
LINC00839-202ENST00000429940 C9orf118A6NHY6 69 aa11.71□□□□□ -0.54
LINC00839-202ENST00000429940 K7ERU9 68 aa11.71□□□□□ -0.54
LINC00839-202ENST00000429940 BMI1P35226 326 aa11.71□□□□□ -0.54
LINC00839-202ENST00000429940 ZNF672Q499Z4 452 aaPredicted RBP11.71□□□□□ -0.54
LINC00839-202ENST00000429940 OR11H6Q8NGC7 330 aa11.71□□□□□ -0.54
LINC00839-202ENST00000429940 ARPC1AQ92747 370 aa11.71□□□□□ -0.54
LINC00839-202ENST00000429940 VGLL1Q99990 258 aa11.71□□□□□ -0.54
LINC00839-202ENST00000429940 NDUFS7O75251 213 aa11.7□□□□□ -0.54
LINC00839-202ENST00000429940 GRNP28799 593 aaKnown RBP11.7□□□□□ -0.54
LINC00839-202ENST00000429940 NMUP48645 174 aa11.7□□□□□ -0.54
LINC00839-202ENST00000429940 KLRD1Q13241 179 aa11.7□□□□□ -0.54
LINC00839-202ENST00000429940 GTF2H5Q6ZYL4 71 aa11.7□□□□□ -0.54
LINC00839-202ENST00000429940 FBLL1A6NHQ2 334 aaKnown RBP11.7□□□□□ -0.54
LINC00839-202ENST00000429940 SIVA1O15304 175 aa11.7□□□□□ -0.54
LINC00839-202ENST00000429940 IGLC6P0CF74 106 aa11.7□□□□□ -0.54
LINC00839-202ENST00000429940 IGFL4Q6B9Z1 124 aa11.7□□□□□ -0.54
LINC00839-202ENST00000429940 WFDC3Q8IUB2 231 aa11.7□□□□□ -0.54
LINC00839-202ENST00000429940 ARL6IP6Q8N6S5 226 aa11.7□□□□□ -0.54
LINC00839-202ENST00000429940 JMJD8Q96S16 334 aa11.7□□□□□ -0.54
LINC00839-202ENST00000429940 CRYBG3Q68DQ2 2970 aa11.69□□□□□ -0.54
LINC00839-202ENST00000429940 HRNRQ86YZ3 2850 aaPredicted RBP11.69□□□□□ -0.54
LINC00839-202ENST00000429940 FAM90A27PA6NNH2 459 aa11.69□□□□□ -0.54
LINC00839-202ENST00000429940 H3BUT2 72 aa11.69□□□□□ -0.54
LINC00839-202ENST00000429940 ADORA2A-AS1P86434 159 aa11.69□□□□□ -0.54
LINC00839-202ENST00000429940 KIR3DS1Q14943 382 aa11.69□□□□□ -0.54
LINC00839-202ENST00000429940 UFSP1Q6NVU6 142 aa11.69□□□□□ -0.54
LINC00839-202ENST00000429940 ADAMTSL5Q6ZMM2 481 aa11.69□□□□□ -0.54
LINC00839-202ENST00000429940 SMIM15Q7Z3B0 74 aa11.69□□□□□ -0.54
LINC00839-202ENST00000429940 OR4X2Q8NGF9 303 aa11.69□□□□□ -0.54
LINC00839-202ENST00000429940 LINC01560Q8TB33 94 aa11.69□□□□□ -0.54
LINC00839-202ENST00000429940 GNLYP22749 145 aa11.69□□□□□ -0.54
LINC00839-202ENST00000429940 ZNF562Q6V9R5 426 aa11.69□□□□□ -0.54
LINC00839-202ENST00000429940 PCP2Q8IVA1 136 aa11.69□□□□□ -0.54
LINC00839-202ENST00000429940 TTC9CQ8N5M4 171 aa11.69□□□□□ -0.54
LINC00839-202ENST00000429940 DKK2Q9UBU2 259 aa11.69□□□□□ -0.54
LINC00839-202ENST00000429940 SMAD5-AS1Q9Y6J3 95 aa11.69□□□□□ -0.54
LINC00839-202ENST00000429940 ORM1P02763 201 aa11.68□□□□□ -0.54
LINC00839-202ENST00000429940 HLA-DMBP28068 263 aa11.68□□□□□ -0.54
LINC00839-202ENST00000429940 NDPQ00604 133 aa11.68□□□□□ -0.54
LINC00839-202ENST00000429940 PRSS57Q6UWY2 283 aa11.68□□□□□ -0.54
LINC00839-202ENST00000429940 C18orf15Q96N68 181 aa11.68□□□□□ -0.54
LINC00839-202ENST00000429940 NAA38Q9BRA0 125 aaKnown RBP11.68□□□□□ -0.54
LINC00839-202ENST00000429940 MAP1LC3AQ9H492 121 aa11.68□□□□□ -0.54
LINC00839-202ENST00000429940 MSRB1Q9NZV6 116 aa11.68□□□□□ -0.54
LINC00839-202ENST00000429940 A0A0G2JLM5 398 aa11.67□□□□□ -0.54
LINC00839-202ENST00000429940 NCBP2LA6PVI3 153 aaKnown RBP11.67□□□□□ -0.54
LINC00839-202ENST00000429940 ZNF575Q86XF7 245 aa11.67□□□□□ -0.54
LINC00839-202ENST00000429940 RNF185Q96GF1 192 aa11.67□□□□□ -0.54
LINC00839-202ENST00000429940 ABCA4P78363 2273 aa11.67□□□□□ -0.54
LINC00839-202ENST00000429940 LY6HO94772 140 aa11.67□□□□□ -0.54
LINC00839-202ENST00000429940 IGHG4P01861 327 aa11.67□□□□□ -0.54
LINC00839-202ENST00000429940 RAB37Q96AX2 223 aa11.67□□□□□ -0.54
LINC00839-202ENST00000429940 NPFFR1Q9GZQ6 430 aa11.67□□□□□ -0.54
LINC00839-202ENST00000429940 USP9XQ93008 2570 aaPredicted RBP11.67□□□□□ -0.54
LINC00839-202ENST00000429940 ODF3BA8MYP8 253 aa11.66□□□□□ -0.54
LINC00839-202ENST00000429940 K7EP34 96 aa11.66□□□□□ -0.54
LINC00839-202ENST00000429940 SCGB2A1O75556 95 aa11.66□□□□□ -0.54
LINC00839-202ENST00000429940 CTSGP08311 255 aa11.66□□□□□ -0.54
LINC00839-202ENST00000429940 ANKHD1Q8IWZ3 2542 aaKnown RBP11.66□□□□□ -0.54
LINC00839-202ENST00000429940 SRSF2Q01130 221 aaKnown RBP11.66□□□□□ -0.54
LINC00839-202ENST00000429940 SELENOKQ9Y6D0 94 aa11.66□□□□□ -0.54
LINC00839-202ENST00000429940 IGHV3OR16-8A0A075B7F1 116 aa11.65□□□□□ -0.54
LINC00839-202ENST00000429940 SAP30O75446 220 aa11.65□□□□□ -0.54
LINC00839-202ENST00000429940 GAS8-AS1O95177 125 aa11.65□□□□□ -0.54
LINC00839-202ENST00000429940 LEPP41159 167 aa11.65□□□□□ -0.54
LINC00839-202ENST00000429940 FABP5P3A8MUU1 101 aa11.65□□□□□ -0.55
LINC00839-202ENST00000429940 M0R1W7 72 aa11.65□□□□□ -0.55
LINC00839-202ENST00000429940 OR2K2Q8NGT1 345 aa11.65□□□□□ -0.55
LINC00839-202ENST00000429940 CNFNQ9BYD5 112 aa11.65□□□□□ -0.55
LINC00839-202ENST00000429940 MEGF9Q9H1U4 602 aa11.65□□□□□ -0.55
LINC00839-202ENST00000429940 IGHV3-35A0A0C4DH35 117 aa11.64□□□□□ -0.55
LINC00839-202ENST00000429940 LINC01546A6NGU7 62 aa11.64□□□□□ -0.55
LINC00839-202ENST00000429940 TNFRSF6BO95407 300 aa11.64□□□□□ -0.55
LINC00839-202ENST00000429940 EVI2AP22794 236 aa11.64□□□□□ -0.55
LINC00839-202ENST00000429940 FCER1GP30273 86 aa11.64□□□□□ -0.55
LINC00839-202ENST00000429940 ERCC8Q13216 396 aa11.64□□□□□ -0.55
LINC00839-202ENST00000429940 PRTN3P24158 256 aa11.63□□□□□ -0.55
LINC00839-202ENST00000429940 DYNAPQ8N1N2 210 aa11.63□□□□□ -0.55
LINC00839-202ENST00000429940 NXT2Q9NPJ8 142 aaKnown RBP11.63□□□□□ -0.55
LINC00839-202ENST00000429940 KMT2BQ9UMN6 2715 aaPredicted RBP11.63□□□□□ -0.55
LINC00839-202ENST00000429940 ASH1LQ9NR48 2969 aaKnown RBP11.63□□□□□ -0.55
LINC00839-202ENST00000429940 ODF1Q14990 250 aa11.63□□□□□ -0.55
LINC00839-202ENST00000429940 TM4SF20Q53R12 229 aa11.63□□□□□ -0.55
LINC00839-202ENST00000429940 TIMD4Q96H15 378 aa11.63□□□□□ -0.55
LINC00839-202ENST00000429940 PSMG3-AS1Q96PY0 264 aa11.63□□□□□ -0.55
LINC00839-202ENST00000429940 A0A1W2PPM0 123 aa11.62□□□□□ -0.55
LINC00839-202ENST00000429940 S100A7P31151 101 aa11.62□□□□□ -0.55
LINC00839-202ENST00000429940 CCDC144NLQ6NUI1 221 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms