RNA–Protein interactions for RNA: ENST00000429527.6

NEDD1-203, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD1, Length 3,366 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-203ENST00000429527 CITED1Q99966 193 aa7.43□□□□□ -1.22
NEDD1-203ENST00000429527 SHANK2-AS3Q9BTD1 123 aa7.43□□□□□ -1.22
NEDD1-203ENST00000429527 CT45A10P0DMU9 189 aa7.43□□□□□ -1.22
NEDD1-203ENST00000429527 IGHV1-8P0DP01 117 aa7.43□□□□□ -1.22
NEDD1-203ENST00000429527 LGALS9BQ3B8N2 356 aa7.43□□□□□ -1.22
NEDD1-203ENST00000429527 MAJINQ3KP22 176 aa7.43□□□□□ -1.22
NEDD1-203ENST00000429527 LGALS9CQ6DKI2 356 aa7.43□□□□□ -1.22
NEDD1-203ENST00000429527 LCN12Q6JVE5 192 aa7.43□□□□□ -1.22
NEDD1-203ENST00000429527 WNT10AQ9GZT5 417 aa7.43□□□□□ -1.22
NEDD1-203ENST00000429527 TRBV19A0A075B6N1 114 aa7.42□□□□□ -1.22
NEDD1-203ENST00000429527 A0A096LNJ9 63 aa7.42□□□□□ -1.22
NEDD1-203ENST00000429527 PGPA6NDG6 321 aa7.42□□□□□ -1.22
NEDD1-203ENST00000429527 HOXA3O43365 443 aaPredicted RBP7.42□□□□□ -1.22
NEDD1-203ENST00000429527 P01737 135 aa7.42□□□□□ -1.22
NEDD1-203ENST00000429527 RUSC1-AS1Q66K80 236 aa7.42□□□□□ -1.22
NEDD1-203ENST00000429527 SIGLEC15Q6ZMC9 328 aa7.42□□□□□ -1.22
NEDD1-203ENST00000429527 SIGLEC9Q9Y336 463 aa7.42□□□□□ -1.22
NEDD1-203ENST00000429527 SETD2Q9BYW2 2564 aaPredicted RBP7.42□□□□□ -1.22
NEDD1-203ENST00000429527 NDUFA3O95167 84 aa7.42□□□□□ -1.22
NEDD1-203ENST00000429527 GNG10P50151 68 aa7.42□□□□□ -1.22
NEDD1-203ENST00000429527 ARF6P62330 175 aa7.42□□□□□ -1.22
NEDD1-203ENST00000429527 WFDC12Q8WWY7 111 aa7.42□□□□□ -1.22
NEDD1-203ENST00000429527 C22orf15Q8WYQ4 148 aa7.42□□□□□ -1.22
NEDD1-203ENST00000429527 ZMAT4Q9H898 229 aa7.42□□□□□ -1.22
NEDD1-203ENST00000429527 ZNF580Q9UK33 172 aa7.42□□□□□ -1.22
NEDD1-203ENST00000429527 SH2D7A6NKC9 451 aaPredicted RBP7.42□□□□□ -1.22
NEDD1-203ENST00000429527 SLC25A34Q6PIV7 304 aa7.42□□□□□ -1.22
NEDD1-203ENST00000429527 NPBQ8NG41 125 aa7.42□□□□□ -1.22
NEDD1-203ENST00000429527 RNASE8Q8TDE3 154 aaKnown RBP7.42□□□□□ -1.22
NEDD1-203ENST00000429527 TMEM133Q9H2Q1 129 aa7.42□□□□□ -1.22
NEDD1-203ENST00000429527 ONECUT1Q9UBC0 465 aa7.42□□□□□ -1.22
NEDD1-203ENST00000429527 CLPSL1A2RUU4 121 aa7.41□□□□□ -1.22
NEDD1-203ENST00000429527 A6NDX4 124 aa7.41□□□□□ -1.22
NEDD1-203ENST00000429527 LEPROTL1O95214 131 aa7.41□□□□□ -1.22
NEDD1-203ENST00000429527 PROK1P58294 105 aa7.41□□□□□ -1.22
NEDD1-203ENST00000429527 ZNF575Q86XF7 245 aa7.41□□□□□ -1.22
NEDD1-203ENST00000429527 SLC25A5P05141 298 aaKnown RBP7.41□□□□□ -1.22
NEDD1-203ENST00000429527 SAA4P35542 130 aa7.41□□□□□ -1.22
NEDD1-203ENST00000429527 SLC25A39Q9BZJ4 359 aaPredicted RBP7.41□□□□□ -1.22
NEDD1-203ENST00000429527 HIGD1AQ9Y241 93 aa7.41□□□□□ -1.22
NEDD1-203ENST00000429527 GNG5P63218 68 aa7.4□□□□□ -1.22
NEDD1-203ENST00000429527 MAP1LC3CQ9BXW4 147 aa7.4□□□□□ -1.22
NEDD1-203ENST00000429527 SLC35B1P78383 322 aa7.4□□□□□ -1.22
NEDD1-203ENST00000429527 BOD1L2Q8IYS8 172 aa7.4□□□□□ -1.22
NEDD1-203ENST00000429527 CFHR4Q92496 578 aa7.4□□□□□ -1.22
NEDD1-203ENST00000429527 SERTAD4Q9NUC0 356 aa7.4□□□□□ -1.22
NEDD1-203ENST00000429527 MTORP42345 2549 aa7.4□□□□□ -1.22
NEDD1-203ENST00000429527 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.4□□□□□ -1.23
NEDD1-203ENST00000429527 TRAV34A0A0B4J273 112 aa7.4□□□□□ -1.23
NEDD1-203ENST00000429527 A0A1B0GUT8 65 aa7.4□□□□□ -1.23
NEDD1-203ENST00000429527 RPL27AP46776 148 aaKnown RBP7.4□□□□□ -1.23
NEDD1-203ENST00000429527 RIGQ13278 110 aa7.4□□□□□ -1.23
NEDD1-203ENST00000429527 PSG3Q16557 428 aa7.4□□□□□ -1.23
NEDD1-203ENST00000429527 RNASEKQ6P5S7 137 aaKnown RBP7.4□□□□□ -1.23
NEDD1-203ENST00000429527 UNQ5815/PRO19632Q6UWF5 114 aa7.4□□□□□ -1.23
NEDD1-203ENST00000429527 IGKV1-17P01599 117 aa7.39□□□□□ -1.23
NEDD1-203ENST00000429527 BRD3OSQ6XYD6 125 aa7.39□□□□□ -1.23
NEDD1-203ENST00000429527 DNAH3Q8TD57 4116 aa7.39□□□□□ -1.23
NEDD1-203ENST00000429527 MAP1AP78559 2803 aaPredicted RBP7.39□□□□□ -1.23
NEDD1-203ENST00000429527 K7EIM0 57 aa7.39□□□□□ -1.23
NEDD1-203ENST00000429527 EBI3Q14213 229 aa7.39□□□□□ -1.23
NEDD1-203ENST00000429527 Q56UQ5 140 aa7.39□□□□□ -1.23
NEDD1-203ENST00000429527 OR9G4Q8NGQ1 327 aa7.39□□□□□ -1.23
NEDD1-203ENST00000429527 ZNF414Q96IQ9 312 aa7.39□□□□□ -1.23
NEDD1-203ENST00000429527 TPSG1Q9NRR2 321 aa7.39□□□□□ -1.23
NEDD1-203ENST00000429527 HIGD1BQ9P298 99 aa7.39□□□□□ -1.23
NEDD1-203ENST00000429527 ARHGAP32A7KAX9 2087 aa7.39□□□□□ -1.23
NEDD1-203ENST00000429527 NPIPB5A8MRT5 1133 aa7.39□□□□□ -1.23
NEDD1-203ENST00000429527 CRIP1P50238 77 aa7.39□□□□□ -1.23
NEDD1-203ENST00000429527 OR10AG1Q8NH19 301 aa7.39□□□□□ -1.23
NEDD1-203ENST00000429527 ZC2HC1AQ96GY0 325 aa7.39□□□□□ -1.23
NEDD1-203ENST00000429527 SSBP4Q9BWG4 385 aaPredicted RBP7.39□□□□□ -1.23
NEDD1-203ENST00000429527 SPINK4O60575 86 aa7.38□□□□□ -1.23
NEDD1-203ENST00000429527 IGHV3-7P01780 117 aa7.38□□□□□ -1.23
NEDD1-203ENST00000429527 IGHV4-59P01825 116 aa7.38□□□□□ -1.23
NEDD1-203ENST00000429527 IGLC6P0CF74 106 aa7.38□□□□□ -1.23
NEDD1-203ENST00000429527 CCL3L1P16619 93 aa7.38□□□□□ -1.23
NEDD1-203ENST00000429527 Q6ZSV7 163 aa7.38□□□□□ -1.23
NEDD1-203ENST00000429527 CLEC5AQ9NY25 188 aa7.38□□□□□ -1.23
NEDD1-203ENST00000429527 A0A087X0K7 114 aa7.38□□□□□ -1.23
NEDD1-203ENST00000429527 IGHV1-3A0A0C4DH29 117 aa7.38□□□□□ -1.23
NEDD1-203ENST00000429527 C7orf71A4D174 169 aa7.38□□□□□ -1.23
NEDD1-203ENST00000429527 LINC01619G3V211 115 aa7.38□□□□□ -1.23
NEDD1-203ENST00000429527 H3BRM9 83 aa7.38□□□□□ -1.23
NEDD1-203ENST00000429527 BUB1B-PAK6H3BSN5 160 aa7.38□□□□□ -1.23
NEDD1-203ENST00000429527 NTF3P20783 257 aa7.38□□□□□ -1.23
NEDD1-203ENST00000429527 HINT1P49773 126 aaPredicted RBP7.38□□□□□ -1.23
NEDD1-203ENST00000429527 DIAPH2-AS1Q14236 149 aa7.38□□□□□ -1.23
NEDD1-203ENST00000429527 C10orf55Q5SWW7 151 aa7.38□□□□□ -1.23
NEDD1-203ENST00000429527 S100A7AQ86SG5 101 aa7.38□□□□□ -1.23
NEDD1-203ENST00000429527 KLRD1Q13241 179 aa7.37□□□□□ -1.23
NEDD1-203ENST00000429527 LDLRAD2Q5SZI1 272 aa7.37□□□□□ -1.23
NEDD1-203ENST00000429527 LINC00173Q6ZV60 143 aa7.37□□□□□ -1.23
NEDD1-203ENST00000429527 PPP1R27Q86WC6 154 aa7.37□□□□□ -1.23
NEDD1-203ENST00000429527 ADAMTSL5Q6ZMM2 481 aa7.37□□□□□ -1.23
NEDD1-203ENST00000429527 LINC01006Q8NI28 216 aa7.37□□□□□ -1.23
NEDD1-203ENST00000429527 HINT2Q9BX68 163 aa7.37□□□□□ -1.23
NEDD1-203ENST00000429527 RBAKDNA6NC62 111 aa7.37□□□□□ -1.23
NEDD1-203ENST00000429527 CBY3A6NI87 242 aa7.37□□□□□ -1.23
NEDD1-203ENST00000429527 PSG1P11464 419 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms