RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 HELZP42694 1942 aaKnown RBP7.18□□□□□ -1.26
CTNND1-208ENST00000428599 IGHV1-24A0A0C4DH33 117 aa7.18□□□□□ -1.26
CTNND1-208ENST00000428599 NTF4P34130 210 aa7.18□□□□□ -1.26
CTNND1-208ENST00000428599 LINC01551Q86U37 167 aa7.18□□□□□ -1.26
CTNND1-208ENST00000428599 PLXNA2O75051 1894 aa7.18□□□□□ -1.26
CTNND1-208ENST00000428599 HS3ST6Q96QI5 342 aa7.18□□□□□ -1.26
CTNND1-208ENST00000428599 NBASA2RRP1 2371 aa7.18□□□□□ -1.26
CTNND1-208ENST00000428599 HLA-DRB4P13762 266 aa7.18□□□□□ -1.26
CTNND1-208ENST00000428599 C9orf66Q5T8R8 295 aa7.18□□□□□ -1.26
CTNND1-208ENST00000428599 HLA-DRB4X5D2U9 266 aa7.18□□□□□ -1.26
CTNND1-208ENST00000428599 TRBV24-1A0A075B6N3 115 aa7.18□□□□□ -1.26
CTNND1-208ENST00000428599 H0YIZ8 118 aa7.18□□□□□ -1.26
CTNND1-208ENST00000428599 RHOHQ15669 191 aa7.18□□□□□ -1.26
CTNND1-208ENST00000428599 LY6G6FQ5SQ64 297 aa7.18□□□□□ -1.26
CTNND1-208ENST00000428599 ROS1P08922 2347 aa7.17□□□□□ -1.26
CTNND1-208ENST00000428599 IGHV3-38A0A0C4DH36 116 aa7.17□□□□□ -1.26
CTNND1-208ENST00000428599 hDV102S1A0JD36 115 aa7.17□□□□□ -1.26
CTNND1-208ENST00000428599 PHF3Q92576 2039 aaKnown RBP7.17□□□□□ -1.26
CTNND1-208ENST00000428599 DOCK9Q9BZ29 2069 aa7.17□□□□□ -1.26
CTNND1-208ENST00000428599 SYS1-DBNDD2H3BUS1 97 aa7.17□□□□□ -1.26
CTNND1-208ENST00000428599 NAA38Q9BRA0 125 aaKnown RBP7.17□□□□□ -1.26
CTNND1-208ENST00000428599 CCL18P55774 89 aa7.17□□□□□ -1.26
CTNND1-208ENST00000428599 SRSF3P84103 164 aaKnown RBP7.17□□□□□ -1.26
CTNND1-208ENST00000428599 Q8TCH9 128 aa7.17□□□□□ -1.26
CTNND1-208ENST00000428599 TRAV13-2A0A0B4J235 113 aa7.17□□□□□ -1.26
CTNND1-208ENST00000428599 A0A1B0GW64 132 aa7.17□□□□□ -1.26
CTNND1-208ENST00000428599 HERVK_113P63121 156 aa7.17□□□□□ -1.26
CTNND1-208ENST00000428599 C2orf66Q6UXQ4 117 aa7.17□□□□□ -1.26
CTNND1-208ENST00000428599 A0A1W2PPI3 338 aa7.17□□□□□ -1.26
CTNND1-208ENST00000428599 G3V318 75 aa7.17□□□□□ -1.26
CTNND1-208ENST00000428599 SRSF2Q01130 221 aaKnown RBP7.17□□□□□ -1.26
CTNND1-208ENST00000428599 C1orf43Q9BWL3 253 aa7.17□□□□□ -1.26
CTNND1-208ENST00000428599 PROK2Q9HC23 129 aa7.17□□□□□ -1.26
CTNND1-208ENST00000428599 PRSS46E5RG02 174 aa7.16□□□□□ -1.26
CTNND1-208ENST00000428599 FGF16O43320 207 aa7.16□□□□□ -1.26
CTNND1-208ENST00000428599 C8orf86Q6ZUL3 223 aa7.16□□□□□ -1.26
CTNND1-208ENST00000428599 ZNF407Q9C0G0 2248 aa7.16□□□□□ -1.26
CTNND1-208ENST00000428599 TRAV12-2A0A075B6T6 113 aa7.16□□□□□ -1.26
CTNND1-208ENST00000428599 IGKV1-39P01597 117 aa7.16□□□□□ -1.26
CTNND1-208ENST00000428599 IGKV1D-39P04432 117 aa7.16□□□□□ -1.26
CTNND1-208ENST00000428599 C4orf48Q5BLP8 95 aa7.16□□□□□ -1.26
CTNND1-208ENST00000428599 UTF1Q5T230 341 aa7.16□□□□□ -1.26
CTNND1-208ENST00000428599 MRPL52Q86TS9 123 aaKnown RBP7.16□□□□□ -1.26
CTNND1-208ENST00000428599 Q8N8P6 123 aa7.16□□□□□ -1.26
CTNND1-208ENST00000428599 ZNF503Q96F45 646 aa7.16□□□□□ -1.26
CTNND1-208ENST00000428599 Q9HAA7 133 aa7.16□□□□□ -1.26
CTNND1-208ENST00000428599 TP53BP1Q12888 1972 aaPredicted RBP7.16□□□□□ -1.26
CTNND1-208ENST00000428599 SDHAF1A6NFY7 115 aa7.16□□□□□ -1.26
CTNND1-208ENST00000428599 TIRAPP58753 221 aa7.16□□□□□ -1.26
CTNND1-208ENST00000428599 RPL18AQ02543 176 aaKnown RBP7.16□□□□□ -1.26
CTNND1-208ENST00000428599 KIR3DS1Q14943 382 aa7.16□□□□□ -1.26
CTNND1-208ENST00000428599 CHKB-CPT1BH3BT56 60 aa7.16□□□□□ -1.26
CTNND1-208ENST00000428599 FOXL2NBQ6ZUU3 175 aa7.16□□□□□ -1.26
CTNND1-208ENST00000428599 HIST1H2BLQ99880 126 aa7.16□□□□□ -1.26
CTNND1-208ENST00000428599 A0A087X0K7 114 aa7.15□□□□□ -1.26
CTNND1-208ENST00000428599 A0A0J9YY99 117 aa7.15□□□□□ -1.26
CTNND1-208ENST00000428599 IGKV1-16P04430 117 aa7.15□□□□□ -1.26
CTNND1-208ENST00000428599 ZNF492Q9P255 531 aa7.15□□□□□ -1.26
CTNND1-208ENST00000428599 HGFACQ04756 655 aa7.15□□□□□ -1.26
CTNND1-208ENST00000428599 LHFPL1Q86WI0 220 aa7.15□□□□□ -1.26
CTNND1-208ENST00000428599 C15orf62A8K5M9 175 aa7.15□□□□□ -1.26
CTNND1-208ENST00000428599 IGHG4P01861 327 aa7.15□□□□□ -1.26
CTNND1-208ENST00000428599 CLPSL2Q6UWE3 100 aa7.15□□□□□ -1.26
CTNND1-208ENST00000428599 C8orf49Q96NF6 230 aa7.15□□□□□ -1.26
CTNND1-208ENST00000428599 IGHV7-4-1A0A0J9YVY3 117 aa7.15□□□□□ -1.27
CTNND1-208ENST00000428599 A0A1B0GUS0 222 aa7.15□□□□□ -1.27
CTNND1-208ENST00000428599 H3BUA1 57 aa7.15□□□□□ -1.27
CTNND1-208ENST00000428599 ZNF134P52741 427 aa7.15□□□□□ -1.27
CTNND1-208ENST00000428599 STPG4Q8N801 248 aa7.15□□□□□ -1.27
CTNND1-208ENST00000428599 KIF26AQ9ULI4 1882 aaPredicted RBP7.15□□□□□ -1.27
CTNND1-208ENST00000428599 ETDCA0A1B0GVM5 59 aa7.14□□□□□ -1.27
CTNND1-208ENST00000428599 BTCP35070 178 aa7.14□□□□□ -1.27
CTNND1-208ENST00000428599 RNF144BQ7Z419 303 aa7.14□□□□□ -1.27
CTNND1-208ENST00000428599 ATP6V0BQ99437 205 aa7.14□□□□□ -1.27
CTNND1-208ENST00000428599 SPANXDQ9BXN6 97 aa7.14□□□□□ -1.27
CTNND1-208ENST00000428599 NDUFA12Q9UI09 145 aa7.14□□□□□ -1.27
CTNND1-208ENST00000428599 KLK5Q9Y337 293 aaPredicted RBP7.14□□□□□ -1.27
CTNND1-208ENST00000428599 CFPP27918 469 aa7.14□□□□□ -1.27
CTNND1-208ENST00000428599 DEFB105AQ8NG35 78 aa7.14□□□□□ -1.27
CTNND1-208ENST00000428599 SPANXA1Q9NS26 97 aa7.14□□□□□ -1.27
CTNND1-208ENST00000428599 C9orf153Q5TBE3 101 aa7.14□□□□□ -1.27
CTNND1-208ENST00000428599 FOXI2Q6ZQN5 318 aa7.14□□□□□ -1.27
CTNND1-208ENST00000428599 Q6ZS49 121 aa7.14□□□□□ -1.27
CTNND1-208ENST00000428599 VPREB3Q9UKI3 123 aa7.14□□□□□ -1.27
CTNND1-208ENST00000428599 ICOSQ9Y6W8 199 aa7.14□□□□□ -1.27
CTNND1-208ENST00000428599 TMEM213A2RRL7 107 aa7.13□□□□□ -1.27
CTNND1-208ENST00000428599 CCL24O00175 119 aa7.13□□□□□ -1.27
CTNND1-208ENST00000428599 C3orf79P0CE67 100 aa7.13□□□□□ -1.27
CTNND1-208ENST00000428599 ZNF833PQ6ZTB9 187 aa7.13□□□□□ -1.27
CTNND1-208ENST00000428599 NOP10Q9NPE3 64 aaKnown RBP7.13□□□□□ -1.27
CTNND1-208ENST00000428599 ETV2O00321 342 aaPredicted RBP7.13□□□□□ -1.27
CTNND1-208ENST00000428599 UBE2CO00762 179 aa7.13□□□□□ -1.27
CTNND1-208ENST00000428599 SH2D6Q7Z4S9 175 aa7.13□□□□□ -1.27
CTNND1-208ENST00000428599 HIST3H2BBQ8N257 126 aa7.13□□□□□ -1.27
CTNND1-208ENST00000428599 TRBV19A0A075B6N1 114 aa7.13□□□□□ -1.27
CTNND1-208ENST00000428599 TRBV20-1A0A075B6N2 111 aa7.13□□□□□ -1.27
CTNND1-208ENST00000428599 FAM231BA6NCW3 169 aa7.13□□□□□ -1.27
CTNND1-208ENST00000428599 WISP1O95388 367 aa7.13□□□□□ -1.27
CTNND1-208ENST00000428599 CRYGCP07315 174 aa7.13□□□□□ -1.27
CTNND1-208ENST00000428599 CXCL1P09341 107 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms