RNA–Protein interactions for RNA: ENST00000428331.6

ATP2C1-204, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2C1, Length 4,795 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-204ENST00000428331 TEX48A0A1B0GUV7 120 aa8.45□□□□□ -1.06
ATP2C1-204ENST00000428331 TMEM238LA0A1B0GVL6 79 aa8.45□□□□□ -1.06
ATP2C1-204ENST00000428331 WI2-2373I1.2A0A1W2PRP0 233 aa8.45□□□□□ -1.06
ATP2C1-204ENST00000428331 A6NJY4 79 aa8.45□□□□□ -1.06
ATP2C1-204ENST00000428331 MYO15AQ9UKN7 3530 aa8.44□□□□□ -1.06
ATP2C1-204ENST00000428331 TRBV25-1A0A075B6N4 114 aa8.44□□□□□ -1.06
ATP2C1-204ENST00000428331 IGHV3OR16-8A0A075B7F1 116 aa8.44□□□□□ -1.06
ATP2C1-204ENST00000428331 A0A096LNJ9 63 aa8.44□□□□□ -1.06
ATP2C1-204ENST00000428331 LAGE3Q14657 143 aa8.44□□□□□ -1.06
ATP2C1-204ENST00000428331 EYSQ5T1H1 3165 aa8.44□□□□□ -1.06
ATP2C1-204ENST00000428331 LYRM7Q5U5X0 104 aa8.44□□□□□ -1.06
ATP2C1-204ENST00000428331 IGFL4Q6B9Z1 124 aa8.44□□□□□ -1.06
ATP2C1-204ENST00000428331 Q8N8P6 123 aa8.44□□□□□ -1.06
ATP2C1-204ENST00000428331 TRAV40A0A0B4J280 105 aa8.44□□□□□ -1.06
ATP2C1-204ENST00000428331 F8W1H4 67 aa8.44□□□□□ -1.06
ATP2C1-204ENST00000428331 SRSF1Q07955 248 aaKnown RBP eCLIP8.44□□□□□ -1.06
ATP2C1-204ENST00000428331 SRSF9Q13242 221 aaKnown RBP eCLIP8.44□□□□□ -1.06
ATP2C1-204ENST00000428331 CEND1Q8N111 149 aa8.44□□□□□ -1.06
ATP2C1-204ENST00000428331 E7EQL1 145 aa8.44□□□□□ -1.06
ATP2C1-204ENST00000428331 NDUFA3O95167 84 aa8.44□□□□□ -1.06
ATP2C1-204ENST00000428331 GAGE13Q4V321 117 aa8.44□□□□□ -1.06
ATP2C1-204ENST00000428331 Q71RC1 249 aaPredicted RBP8.44□□□□□ -1.06
ATP2C1-204ENST00000428331 NEGR1Q7Z3B1 354 aa8.44□□□□□ -1.06
ATP2C1-204ENST00000428331 RIF1Q5UIP0 2472 aaKnown RBP8.44□□□□□ -1.06
ATP2C1-204ENST00000428331 ODF1Q14990 250 aa8.44□□□□□ -1.06
ATP2C1-204ENST00000428331 SLC50A1Q9BRV3 221 aa8.44□□□□□ -1.06
ATP2C1-204ENST00000428331 VPS13AQ96RL7 3174 aa8.43□□□□□ -1.06
ATP2C1-204ENST00000428331 A0A1B0GWB2 263 aa8.43□□□□□ -1.06
ATP2C1-204ENST00000428331 K7ERJ3 54 aa8.43□□□□□ -1.06
ATP2C1-204ENST00000428331 MRGPRG-AS1Q2M3A8 158 aa8.43□□□□□ -1.06
ATP2C1-204ENST00000428331 MSRB1Q9NZV6 116 aa8.43□□□□□ -1.06
ATP2C1-204ENST00000428331 PLNP26678 52 aa8.43□□□□□ -1.06
ATP2C1-204ENST00000428331 TAL2Q16559 108 aa8.43□□□□□ -1.06
ATP2C1-204ENST00000428331 TTTY13Q9BZ97 58 aa8.43□□□□□ -1.06
ATP2C1-204ENST00000428331 CD300EQ496F6 205 aaPredicted RBP8.42□□□□□ -1.06
ATP2C1-204ENST00000428331 ABHD17AQ96GS6 310 aa8.42□□□□□ -1.06
ATP2C1-204ENST00000428331 CLUHP3Q96NS8 147 aa8.42□□□□□ -1.06
ATP2C1-204ENST00000428331 KLK15Q9H2R5 256 aa8.42□□□□□ -1.06
ATP2C1-204ENST00000428331 CACNA1BQ00975 2339 aa8.42□□□□□ -1.06
ATP2C1-204ENST00000428331 DTX2Q86UW9 622 aa8.42□□□□□ -1.06
ATP2C1-204ENST00000428331 MRPL35Q9NZE8 188 aaKnown RBP8.42□□□□□ -1.06
ATP2C1-204ENST00000428331 ECSCRQ19T08 205 aa8.42□□□□□ -1.06
ATP2C1-204ENST00000428331 SCGB3A1Q96QR1 104 aa8.42□□□□□ -1.06
ATP2C1-204ENST00000428331 SPTBN2O15020 2390 aa8.42□□□□□ -1.06
ATP2C1-204ENST00000428331 RAI1Q7Z5J4 1906 aaPredicted RBP8.42□□□□□ -1.06
ATP2C1-204ENST00000428331 TSSC4Q9Y5U2 329 aaPredicted RBP8.42□□□□□ -1.06
ATP2C1-204ENST00000428331 MED13LQ71F56 2210 aa8.42□□□□□ -1.06
ATP2C1-204ENST00000428331 FRYLO94915 3013 aa8.41□□□□□ -1.06
ATP2C1-204ENST00000428331 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.41□□□□□ -1.06
ATP2C1-204ENST00000428331 THBDP07204 575 aa8.41□□□□□ -1.06
ATP2C1-204ENST00000428331 AZU1P20160 251 aa8.41□□□□□ -1.06
ATP2C1-204ENST00000428331 ETDBQ3ZM63 59 aa8.41□□□□□ -1.06
ATP2C1-204ENST00000428331 PIFOQ8TCI5 191 aa8.41□□□□□ -1.06
ATP2C1-204ENST00000428331 PRO3102Q9H379 93 aa8.41□□□□□ -1.06
ATP2C1-204ENST00000428331 IGLC6P0CF74 106 aa8.41□□□□□ -1.06
ATP2C1-204ENST00000428331 ERCC8Q13216 396 aa8.41□□□□□ -1.06
ATP2C1-204ENST00000428331 FOXE3Q13461 319 aa8.41□□□□□ -1.06
ATP2C1-204ENST00000428331 METTL26Q96S19 204 aa8.41□□□□□ -1.06
ATP2C1-204ENST00000428331 GAGE12HA6NDE8 117 aa8.41□□□□□ -1.06
ATP2C1-204ENST00000428331 TNFRSF13BO14836 293 aaPredicted RBP8.41□□□□□ -1.06
ATP2C1-204ENST00000428331 RAXQ9Y2V3 346 aa8.41□□□□□ -1.06
ATP2C1-204ENST00000428331 IGHV3OR16-13A0A075B7E8 117 aa8.41□□□□□ -1.06
ATP2C1-204ENST00000428331 IGHV3-74A0A0B4J1X5 117 aa8.41□□□□□ -1.06
ATP2C1-204ENST00000428331 LOC107984156A0A0G2JMH3 177 aa8.41□□□□□ -1.06
ATP2C1-204ENST00000428331 FCN3O75636 299 aa8.41□□□□□ -1.06
ATP2C1-204ENST00000428331 ARL17AQ8IVW1 177 aa8.41□□□□□ -1.06
ATP2C1-204ENST00000428331 MRPL16Q9NX20 251 aaKnown RBP8.41□□□□□ -1.06
ATP2C1-204ENST00000428331 FRYQ5TBA9 3013 aa8.4□□□□□ -1.06
ATP2C1-204ENST00000428331 H7C1H1 209 aa8.4□□□□□ -1.06
ATP2C1-204ENST00000428331 ORMDL2Q53FV1 153 aa8.4□□□□□ -1.06
ATP2C1-204ENST00000428331 FOXI2Q6ZQN5 318 aa8.4□□□□□ -1.06
ATP2C1-204ENST00000428331 IGLV11-55A0A075B6I3 123 aa8.4□□□□□ -1.06
ATP2C1-204ENST00000428331 IGLL5B9A064 214 aa8.4□□□□□ -1.06
ATP2C1-204ENST00000428331 HOXA3O43365 443 aaPredicted RBP8.4□□□□□ -1.06
ATP2C1-204ENST00000428331 SCGB1A1P11684 91 aa8.4□□□□□ -1.06
ATP2C1-204ENST00000428331 HLA-DMBP28068 263 aa8.4□□□□□ -1.06
ATP2C1-204ENST00000428331 HERVK_113P61574 105 aa8.4□□□□□ -1.06
ATP2C1-204ENST00000428331 GATA1P15976 413 aaPredicted RBP8.4□□□□□ -1.07
ATP2C1-204ENST00000428331 C12orf74Q32Q52 190 aa8.4□□□□□ -1.07
ATP2C1-204ENST00000428331 ZNF672Q499Z4 452 aaPredicted RBP8.4□□□□□ -1.07
ATP2C1-204ENST00000428331 IGKV2D-26A0A0A0MRZ7 120 aa8.39□□□□□ -1.07
ATP2C1-204ENST00000428331 IGHV3-66A0A0C4DH42 116 aa8.39□□□□□ -1.07
ATP2C1-204ENST00000428331 H3BMG7 143 aa8.39□□□□□ -1.07
ATP2C1-204ENST00000428331 ZNF80P51504 273 aaPredicted RBP8.39□□□□□ -1.07
ATP2C1-204ENST00000428331 SRSF2Q01130 221 aaKnown RBP8.39□□□□□ -1.07
ATP2C1-204ENST00000428331 CHTOPQ9Y3Y2 248 aaKnown RBP8.39□□□□□ -1.07
ATP2C1-204ENST00000428331 MRPS12O15235 138 aaKnown RBP8.39□□□□□ -1.07
ATP2C1-204ENST00000428331 C16orf92Q96LL3 132 aa8.39□□□□□ -1.07
ATP2C1-204ENST00000428331 ZNF48Q96MX3 618 aaPredicted RBP8.39□□□□□ -1.07
ATP2C1-204ENST00000428331 TM2D2Q9BX73 214 aa8.39□□□□□ -1.07
ATP2C1-204ENST00000428331 NBEAQ8NFP9 2946 aa8.39□□□□□ -1.07
ATP2C1-204ENST00000428331 SVIPQ8NHG7 77 aa8.39□□□□□ -1.07
ATP2C1-204ENST00000428331 ZNF502Q8TBZ5 544 aa8.39□□□□□ -1.07
ATP2C1-204ENST00000428331 APC2O95996 2303 aa8.39□□□□□ -1.07
ATP2C1-204ENST00000428331 A0A087WX48 190 aa8.39□□□□□ -1.07
ATP2C1-204ENST00000428331 J3KRW8 73 aa8.39□□□□□ -1.07
ATP2C1-204ENST00000428331 PIP4P1Q86T03 277 aa8.39□□□□□ -1.07
ATP2C1-204ENST00000428331 DYNAPQ8N1N2 210 aa8.39□□□□□ -1.07
ATP2C1-204ENST00000428331 FAM90A27PA6NNH2 459 aa8.38□□□□□ -1.07
ATP2C1-204ENST00000428331 MGPP08493 103 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms