RNA–Protein interactions for RNA: ENST00000427862.1

GCFC2-203, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 632 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-203ENST00000427862 C3orf85A0A1B0GTC6 90 aa0.59□□□□□ -2.31
GCFC2-203ENST00000427862 NUPR2A6NF83 97 aa0.59□□□□□ -2.31
GCFC2-203ENST00000427862 A6NN06 94 aa0.59□□□□□ -2.31
GCFC2-203ENST00000427862 FAM107AO95990 144 aa0.59□□□□□ -2.31
GCFC2-203ENST00000427862 IGHV3-30P01768 117 aa0.59□□□□□ -2.31
GCFC2-203ENST00000427862 SAA1P0DJI8 122 aaPredicted RBP0.59□□□□□ -2.31
GCFC2-203ENST00000427862 IGHV3-30-5P0DP03 117 aa0.59□□□□□ -2.31
GCFC2-203ENST00000427862 NEFHP12036 1026 aa0.59□□□□□ -2.31
GCFC2-203ENST00000427862 NEDD8Q15843 81 aa0.59□□□□□ -2.31
GCFC2-203ENST00000427862 LINC00305Q7Z4B0 112 aa0.59□□□□□ -2.31
GCFC2-203ENST00000427862 C5orf17Q8NAS9 161 aa0.59□□□□□ -2.31
GCFC2-203ENST00000427862 CLEC2BQ92478 149 aa0.59□□□□□ -2.31
GCFC2-203ENST00000427862 CIB3Q96Q77 187 aaPredicted RBP0.59□□□□□ -2.31
GCFC2-203ENST00000427862 NIT2Q9NQR4 276 aa0.59□□□□□ -2.31
GCFC2-203ENST00000427862 SIP14410 1827 aa0.59□□□□□ -2.32
GCFC2-203ENST00000427862 CITO14578 2027 aa0.59□□□□□ -2.32
GCFC2-203ENST00000427862 FXYD6P3P58550 94 aa0.58□□□□□ -2.32
GCFC2-203ENST00000427862 MAXP61244 160 aa0.58□□□□□ -2.32
GCFC2-203ENST00000427862 RPL37AP61513 92 aaKnown RBP0.58□□□□□ -2.32
GCFC2-203ENST00000427862 THEM6Q8WUY1 208 aa0.58□□□□□ -2.32
GCFC2-203ENST00000427862 LXNQ9BS40 222 aa0.58□□□□□ -2.32
GCFC2-203ENST00000427862 SMPXQ9UHP9 88 aa0.58□□□□□ -2.32
GCFC2-203ENST00000427862 PTPRFP10586 1907 aa0.58□□□□□ -2.32
GCFC2-203ENST00000427862 MYLKQ15746 1914 aa0.58□□□□□ -2.32
GCFC2-203ENST00000427862 PIK3C2AO00443 1686 aa0.57□□□□□ -2.32
GCFC2-203ENST00000427862 TRAV13-1A0A0B4J241 112 aa0.57□□□□□ -2.32
GCFC2-203ENST00000427862 A0A1B0GV72 72 aa0.57□□□□□ -2.32
GCFC2-203ENST00000427862 FABP1P07148 127 aa0.57□□□□□ -2.32
GCFC2-203ENST00000427862 CCL4P13236 92 aa0.57□□□□□ -2.32
GCFC2-203ENST00000427862 SRP9P49458 86 aaKnown RBP0.57□□□□□ -2.32
GCFC2-203ENST00000427862 IZUMO2Q6UXV1 221 aa0.57□□□□□ -2.32
GCFC2-203ENST00000427862 Q6ZS92 163 aa0.57□□□□□ -2.32
GCFC2-203ENST00000427862 ZGRF1Q86YA3 2104 aa0.57□□□□□ -2.32
GCFC2-203ENST00000427862 AP1S3Q96PC3 154 aa0.57□□□□□ -2.32
GCFC2-203ENST00000427862 CCL19Q99731 98 aa0.57□□□□□ -2.32
GCFC2-203ENST00000427862 MED31Q9Y3C7 131 aa0.57□□□□□ -2.32
GCFC2-203ENST00000427862 TRBV7-6A0A0J9YX20 115 aa0.56□□□□□ -2.32
GCFC2-203ENST00000427862 H3BMG7 143 aa0.56□□□□□ -2.32
GCFC2-203ENST00000427862 SULT1C4O75897 302 aa0.56□□□□□ -2.32
GCFC2-203ENST00000427862 CCSMST1Q4G0I0 132 aa0.56□□□□□ -2.32
GCFC2-203ENST00000427862 HRCT1Q6UXD1 115 aa0.56□□□□□ -2.32
GCFC2-203ENST00000427862 Q86TA4 180 aa0.56□□□□□ -2.32
GCFC2-203ENST00000427862 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.56□□□□□ -2.32
GCFC2-203ENST00000427862 TMEM229BQ8NBD8 167 aa0.56□□□□□ -2.32
GCFC2-203ENST00000427862 JPT1Q9UK76 154 aa0.56□□□□□ -2.32
GCFC2-203ENST00000427862 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.55□□□□□ -2.32
GCFC2-203ENST00000427862 LOC107986453A0A1B0GWG9 222 aa0.55□□□□□ -2.32
GCFC2-203ENST00000427862 ARL5CA6NH57 179 aa0.55□□□□□ -2.32
GCFC2-203ENST00000427862 BBIP1A8MTZ0 92 aa0.55□□□□□ -2.32
GCFC2-203ENST00000427862 GYPBP06028 91 aa0.55□□□□□ -2.32
GCFC2-203ENST00000427862 SPINT3P49223 89 aa0.55□□□□□ -2.32
GCFC2-203ENST00000427862 POLR2HP52434 150 aaKnown RBP0.55□□□□□ -2.32
GCFC2-203ENST00000427862 ZNF137PP52743 207 aa0.55□□□□□ -2.32
GCFC2-203ENST00000427862 DNAJB13P59910 316 aa0.55□□□□□ -2.32
GCFC2-203ENST00000427862 KRTAP21-1Q3LI58 79 aa0.55□□□□□ -2.32
GCFC2-203ENST00000427862 TCTEX1D1Q8N7M0 179 aa0.55□□□□□ -2.32
GCFC2-203ENST00000427862 MORN4Q8NDC4 146 aa0.55□□□□□ -2.32
GCFC2-203ENST00000427862 OR9Q1Q8NGQ5 310 aa0.55□□□□□ -2.32
GCFC2-203ENST00000427862 PLAC4Q8WY50 150 aa0.55□□□□□ -2.32
GCFC2-203ENST00000427862 NABP2Q9BQ15 211 aa0.55□□□□□ -2.32
GCFC2-203ENST00000427862 LPAR5Q9H1C0 372 aa0.55□□□□□ -2.32
GCFC2-203ENST00000427862 MPC1Q9Y5U8 109 aa0.55□□□□□ -2.32
GCFC2-203ENST00000427862 NAV3Q8IVL0 2385 aa0.55□□□□□ -2.32
GCFC2-203ENST00000427862 KNTC1P50748 2209 aa0.54□□□□□ -2.32
GCFC2-203ENST00000427862 NUP210LQ5VU65 1888 aa0.54□□□□□ -2.32
GCFC2-203ENST00000427862 ADGBQ8N7X0 1667 aa0.54□□□□□ -2.32
GCFC2-203ENST00000427862 IFNA21P01568 189 aa0.54□□□□□ -2.32
GCFC2-203ENST00000427862 LSM3P62310 102 aaKnown RBP0.54□□□□□ -2.32
GCFC2-203ENST00000427862 TFAMQ00059 246 aaKnown RBP0.54□□□□□ -2.32
GCFC2-203ENST00000427862 TOMM20LQ6UXN7 152 aa0.54□□□□□ -2.32
GCFC2-203ENST00000427862 TEX29Q8N6K0 151 aa0.54□□□□□ -2.32
GCFC2-203ENST00000427862 FKBP11Q9NYL4 201 aa0.54□□□□□ -2.32
GCFC2-203ENST00000427862 N4BP2Q86UW6 1770 aaPredicted RBP0.53□□□□□ -2.32
GCFC2-203ENST00000427862 LOC107984156A0A0G2JMH3 177 aa0.53□□□□□ -2.32
GCFC2-203ENST00000427862 A0A1W2PPB8 328 aa0.53□□□□□ -2.32
GCFC2-203ENST00000427862 A0A1W2PRS3 328 aa0.53□□□□□ -2.32
GCFC2-203ENST00000427862 KIR3DP1A8MWS1 328 aa0.53□□□□□ -2.32
GCFC2-203ENST00000427862 CAV3P56539 151 aa0.53□□□□□ -2.32
GCFC2-203ENST00000427862 C6orf52Q5T4I8 152 aa0.53□□□□□ -2.32
GCFC2-203ENST00000427862 C3orf62Q6ZUJ4 267 aa0.53□□□□□ -2.32
GCFC2-203ENST00000427862 ARL17AQ8IVW1 177 aa0.53□□□□□ -2.32
GCFC2-203ENST00000427862 C19orf12Q9NSK7 152 aa0.53□□□□□ -2.32
GCFC2-203ENST00000427862 TRAPPC2LQ9UL33 140 aa0.53□□□□□ -2.32
GCFC2-203ENST00000427862 MYH2Q9UKX2 1941 aa0.53□□□□□ -2.32
GCFC2-203ENST00000427862 DLC1Q96QB1 1528 aa0.53□□□□□ -2.33
GCFC2-203ENST00000427862 SPINK7P58062 85 aa0.52□□□□□ -2.33
GCFC2-203ENST00000427862 SNRPD3P62318 126 aaKnown RBP0.52□□□□□ -2.33
GCFC2-203ENST00000427862 TMEM128Q5BJH2 165 aa0.52□□□□□ -2.33
GCFC2-203ENST00000427862 XAF1Q6GPH4 301 aa0.52□□□□□ -2.33
GCFC2-203ENST00000427862 C10orf99Q6UWK7 81 aa0.52□□□□□ -2.33
GCFC2-203ENST00000427862 PLAC8Q9NZF1 115 aa0.52□□□□□ -2.33
GCFC2-203ENST00000427862 TCOF1Q13428 1488 aaKnown RBP0.52□□□□□ -2.33
GCFC2-203ENST00000427862 ZCCHC11Q5TAX3 1644 aaKnown RBP0.52□□□□□ -2.33
GCFC2-203ENST00000427862 SPTBP11277 2137 aa0.52□□□□□ -2.33
GCFC2-203ENST00000427862 LOC107984640A0A0U1RRK4 108 aa0.51□□□□□ -2.33
GCFC2-203ENST00000427862 IFITM5A6NNB3 132 aa0.51□□□□□ -2.33
GCFC2-203ENST00000427862 PGRMC1O00264 195 aaKnown RBP0.51□□□□□ -2.33
GCFC2-203ENST00000427862 SLC25A4P12235 298 aa0.51□□□□□ -2.33
GCFC2-203ENST00000427862 RPL7P18124 248 aaKnown RBP0.51□□□□□ -2.33
GCFC2-203ENST00000427862 CRYGSP22914 178 aa0.51□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms