RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 SMR3AQ99954 134 aa20.12■□□□□ 0.81
LDB1-202ENST00000425280 NRN1Q9NPD7 142 aa20.12■□□□□ 0.81
LDB1-202ENST00000425280 TMEM213A2RRL7 107 aa20.11■□□□□ 0.81
LDB1-202ENST00000425280 RPL11P62913 178 aaKnown RBP20.11■□□□□ 0.81
LDB1-202ENST00000425280 COX19Q49B96 90 aa20.11■□□□□ 0.81
LDB1-202ENST00000425280 GFI1BQ5VTD9 330 aa20.11■□□□□ 0.81
LDB1-202ENST00000425280 ANK3Q12955 4377 aaKnown RBP20.11■□□□□ 0.81
LDB1-202ENST00000425280 MYO9AB2RTY4 2548 aa20.11■□□□□ 0.81
LDB1-202ENST00000425280 C18orf65Q6ZTR6 163 aa20.11■□□□□ 0.81
LDB1-202ENST00000425280 REC114Q7Z4M0 266 aa20.11■□□□□ 0.81
LDB1-202ENST00000425280 TMEM160Q9NX00 188 aa20.11■□□□□ 0.81
LDB1-202ENST00000425280 SELENOKQ9Y6D0 94 aa20.11■□□□□ 0.81
LDB1-202ENST00000425280 GZMBP10144 247 aa20.1■□□□□ 0.81
LDB1-202ENST00000425280 CDX1P47902 265 aaPredicted RBP20.1■□□□□ 0.81
LDB1-202ENST00000425280 TCTEX1D4Q5JR98 221 aa20.1■□□□□ 0.81
LDB1-202ENST00000425280 AGPAT4-IT1Q9H0P7 198 aa20.1■□□□□ 0.81
LDB1-202ENST00000425280 XKRY2A2RUG3 117 aa20.09■□□□□ 0.81
LDB1-202ENST00000425280 FAM231BA6NCW3 169 aa20.09■□□□□ 0.81
LDB1-202ENST00000425280 SH2D1AO60880 128 aa20.09■□□□□ 0.81
LDB1-202ENST00000425280 MT-ND6P03923 174 aa20.09■□□□□ 0.81
LDB1-202ENST00000425280 HOXD3P31249 432 aaPredicted RBP20.09■□□□□ 0.81
LDB1-202ENST00000425280 FAM162BQ5T6X4 162 aa20.09■□□□□ 0.81
LDB1-202ENST00000425280 WIPF2Q8TF74 440 aaPredicted RBP20.09■□□□□ 0.81
LDB1-202ENST00000425280 NDFIP1Q9BT67 221 aa20.09■□□□□ 0.81
LDB1-202ENST00000425280 A8MWP6 167 aa20.09■□□□□ 0.81
LDB1-202ENST00000425280 SYNJ2BPP57105 145 aa20.09■□□□□ 0.81
LDB1-202ENST00000425280 RASL11AQ6T310 242 aa20.09■□□□□ 0.81
LDB1-202ENST00000425280 IFITM10A6NMD0 228 aa20.08■□□□□ 0.81
LDB1-202ENST00000425280 LGALS9O00182 355 aa20.08■□□□□ 0.81
LDB1-202ENST00000425280 RAB4BP61018 213 aa20.08■□□□□ 0.81
LDB1-202ENST00000425280 SCGB2A2Q13296 93 aa20.08■□□□□ 0.81
LDB1-202ENST00000425280 PGLYRP4Q96LB8 373 aa20.08■□□□□ 0.81
LDB1-202ENST00000425280 ZNF80P51504 273 aaPredicted RBP20.07■□□□□ 0.8
LDB1-202ENST00000425280 RBPMS2Q6ZRY4 209 aaKnown RBP20.07■□□□□ 0.8
LDB1-202ENST00000425280 IGKV3-7A0A075B6H7 116 aa20.07■□□□□ 0.8
LDB1-202ENST00000425280 COA6Q5JTJ3 125 aaKnown RBP20.07■□□□□ 0.8
LDB1-202ENST00000425280 C9orf47Q6ZRZ4 202 aa20.07■□□□□ 0.8
LDB1-202ENST00000425280 HIST3H2BBQ8N257 126 aa20.07■□□□□ 0.8
LDB1-202ENST00000425280 ZNF738Q8NE65 137 aa20.07■□□□□ 0.8
LDB1-202ENST00000425280 ATP5L2Q7Z4Y8 100 aa20.06■□□□□ 0.8
LDB1-202ENST00000425280 A0A1B0GXF2 115 aa20.06■□□□□ 0.8
LDB1-202ENST00000425280 HLA-DQA1P01909 254 aa20.06■□□□□ 0.8
LDB1-202ENST00000425280 BMI1P35226 326 aa20.06■□□□□ 0.8
LDB1-202ENST00000425280 TMEM78Q5T7P6 136 aa20.06■□□□□ 0.8
LDB1-202ENST00000425280 GDF5OSQ5U4N7 250 aa20.06■□□□□ 0.8
LDB1-202ENST00000425280 RNASE1P07998 156 aaKnown RBP20.05■□□□□ 0.8
LDB1-202ENST00000425280 SRD5A1P18405 259 aa20.05■□□□□ 0.8
LDB1-202ENST00000425280 ZNF138P52744 262 aa20.05■□□□□ 0.8
LDB1-202ENST00000425280 DEFB136Q30KP8 78 aa20.05■□□□□ 0.8
LDB1-202ENST00000425280 FOXA3P55318 350 aaPredicted RBP20.04■□□□□ 0.8
LDB1-202ENST00000425280 PDZD11Q5EBL8 140 aa20.04■□□□□ 0.8
LDB1-202ENST00000425280 C4orf3Q8WVX3 66 aa20.04■□□□□ 0.8
LDB1-202ENST00000425280 LY6G6DO95868 133 aa20.03■□□□□ 0.8
LDB1-202ENST00000425280 KLF5Q13887 457 aaPredicted RBP20.03■□□□□ 0.8
LDB1-202ENST00000425280 TMEM189A5PLL7 270 aa20.03■□□□□ 0.8
LDB1-202ENST00000425280 ZNF705DP0CH99 300 aaPredicted RBP20.03■□□□□ 0.8
LDB1-202ENST00000425280 ZNF705BP0CI00 300 aaPredicted RBP20.03■□□□□ 0.8
LDB1-202ENST00000425280 PPP1R14DQ9NXH3 145 aa20.03■□□□□ 0.8
LDB1-202ENST00000425280 CAMPP49913 170 aa20.02■□□□□ 0.8
LDB1-202ENST00000425280 KHDC1LQ5JSQ8 128 aa20.02■□□□□ 0.8
LDB1-202ENST00000425280 OVOL1O14753 267 aa20.01■□□□□ 0.79
LDB1-202ENST00000425280 SLURP1P55000 103 aa20.01■□□□□ 0.79
LDB1-202ENST00000425280 HBBP68871 147 aa20.01■□□□□ 0.79
LDB1-202ENST00000425280 ZNF418Q8TF45 676 aaPredicted RBP20.01■□□□□ 0.79
LDB1-202ENST00000425280 DCANP1Q8TF63 244 aa20.01■□□□□ 0.79
LDB1-202ENST00000425280 C2orf70A6NJV1 201 aa20■□□□□ 0.79
LDB1-202ENST00000425280 LINC01619G3V211 115 aa20■□□□□ 0.79
LDB1-202ENST00000425280 APCSP02743 223 aa20■□□□□ 0.79
LDB1-202ENST00000425280 S100A8P05109 93 aa20■□□□□ 0.79
LDB1-202ENST00000425280 SLAQ13239 276 aa20■□□□□ 0.79
LDB1-202ENST00000425280 KIAA1644Q3SXP7 199 aa20■□□□□ 0.79
LDB1-202ENST00000425280 HIST2H2BDQ6DRA6 164 aa20■□□□□ 0.79
LDB1-202ENST00000425280 LINC00518Q8N0U6 118 aa20■□□□□ 0.79
LDB1-202ENST00000425280 CUBNO60494 3623 aa20■□□□□ 0.79
LDB1-202ENST00000425280 TMSB15BA0A087X1C1 80 aa19.99■□□□□ 0.79
LDB1-202ENST00000425280 GRIFINA4D1Z8 144 aa19.99■□□□□ 0.79
LDB1-202ENST00000425280 DEFB1P60022 68 aa19.99■□□□□ 0.79
LDB1-202ENST00000425280 OR11H1Q8NG94 326 aa19.99■□□□□ 0.79
LDB1-202ENST00000425280 A0A1B0GUS0 222 aa19.99■□□□□ 0.79
LDB1-202ENST00000425280 FABP5P3A8MUU1 101 aa19.99■□□□□ 0.79
LDB1-202ENST00000425280 HILS1P60008 231 aa19.99■□□□□ 0.79
LDB1-202ENST00000425280 CRISP2P16562 243 aa19.98■□□□□ 0.79
LDB1-202ENST00000425280 KLHL30-AS1Q8NEE0 82 aa19.98■□□□□ 0.79
LDB1-202ENST00000425280 OR10J6PQ8NGY7 276 aa19.98■□□□□ 0.79
LDB1-202ENST00000425280 MS4A6AQ9H2W1 248 aa19.98■□□□□ 0.79
LDB1-202ENST00000425280 C16orf95Q9H693 158 aa19.98■□□□□ 0.79
LDB1-202ENST00000425280 SAMD13Q5VXD3 122 aa19.98■□□□□ 0.79
LDB1-202ENST00000425280 WFDC3Q8IUB2 231 aa19.98■□□□□ 0.79
LDB1-202ENST00000425280 OR1N2Q8NGR9 330 aa19.98■□□□□ 0.79
LDB1-202ENST00000425280 LINC00477Q96M19 166 aa19.98■□□□□ 0.79
LDB1-202ENST00000425280 SSBP4Q9BWG4 385 aaPredicted RBP19.98■□□□□ 0.79
LDB1-202ENST00000425280 MTORP42345 2549 aa19.97■□□□□ 0.79
LDB1-202ENST00000425280 HAX1O00165 279 aa19.97■□□□□ 0.79
LDB1-202ENST00000425280 SRSF2Q01130 221 aaKnown RBP19.97■□□□□ 0.79
LDB1-202ENST00000425280 DUX3Q96PT4 197 aa19.97■□□□□ 0.79
LDB1-202ENST00000425280 NOTCH2Q04721 2471 aa19.97■□□□□ 0.79
LDB1-202ENST00000425280 S100A2P29034 98 aa19.96■□□□□ 0.79
LDB1-202ENST00000425280 ID1P41134 155 aa19.96■□□□□ 0.79
LDB1-202ENST00000425280 Q6AWC8 147 aa19.96■□□□□ 0.79
LDB1-202ENST00000425280 DPF1Q92782 380 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms