RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 PMS2P11Q13670 270 aa9.92□□□□□ -0.82
PRPF39-202ENST00000424478 SPINK13Q1W4C9 94 aa9.92□□□□□ -0.82
PRPF39-202ENST00000424478 PDE6DO43924 150 aa9.92□□□□□ -0.82
PRPF39-202ENST00000424478 UBE2G1P62253 170 aa9.92□□□□□ -0.82
PRPF39-202ENST00000424478 KRTAP21-3Q3LHN1 58 aa9.92□□□□□ -0.82
PRPF39-202ENST00000424478 CENPWQ5EE01 88 aa9.92□□□□□ -0.82
PRPF39-202ENST00000424478 PRR9Q5T870 116 aa9.92□□□□□ -0.82
PRPF39-202ENST00000424478 OR10J6PQ8NGY7 276 aa9.92□□□□□ -0.82
PRPF39-202ENST00000424478 SAV1Q9H4B6 383 aaPredicted RBP9.92□□□□□ -0.82
PRPF39-202ENST00000424478 PSG8Q9UQ74 426 aa9.92□□□□□ -0.82
PRPF39-202ENST00000424478 PRM2P04554 102 aa9.91□□□□□ -0.82
PRPF39-202ENST00000424478 EBLN2Q6P2I7 272 aa9.91□□□□□ -0.82
PRPF39-202ENST00000424478 OR2K2Q8NGT1 345 aa9.91□□□□□ -0.82
PRPF39-202ENST00000424478 SMIM7Q9BQ49 75 aa9.91□□□□□ -0.82
PRPF39-202ENST00000424478 H3BMM0 161 aa9.91□□□□□ -0.82
PRPF39-202ENST00000424478 FLI1Q01543 452 aaPredicted RBP9.91□□□□□ -0.82
PRPF39-202ENST00000424478 OR5I1Q13606 314 aa9.91□□□□□ -0.82
PRPF39-202ENST00000424478 PRR27Q6MZM9 219 aa9.91□□□□□ -0.82
PRPF39-202ENST00000424478 ARL2-SNX15V9GYD0 113 aa9.91□□□□□ -0.82
PRPF39-202ENST00000424478 ZNF727A8MUV8 499 aa9.91□□□□□ -0.82
PRPF39-202ENST00000424478 WIPF1O43516 503 aa9.91□□□□□ -0.82
PRPF39-202ENST00000424478 HIST1H2BAQ96A08 127 aa9.91□□□□□ -0.82
PRPF39-202ENST00000424478 NKX6-2Q9C056 277 aaPredicted RBP9.91□□□□□ -0.82
PRPF39-202ENST00000424478 SRD5A3Q9H8P0 318 aa9.91□□□□□ -0.82
PRPF39-202ENST00000424478 TMEM78Q5T7P6 136 aa9.9□□□□□ -0.82
PRPF39-202ENST00000424478 Q86TA4 180 aa9.9□□□□□ -0.82
PRPF39-202ENST00000424478 STHQ8IWL8 128 aa9.9□□□□□ -0.82
PRPF39-202ENST00000424478 C11orf52Q96A22 123 aa9.9□□□□□ -0.82
PRPF39-202ENST00000424478 TMEM218A2RU14 115 aa9.9□□□□□ -0.82
PRPF39-202ENST00000424478 MGST1P10620 155 aaKnown RBP9.9□□□□□ -0.82
PRPF39-202ENST00000424478 SOHLH1Q5JUK2 328 aa9.9□□□□□ -0.82
PRPF39-202ENST00000424478 TRAV2A0A0B4J234 112 aa9.89□□□□□ -0.83
PRPF39-202ENST00000424478 F8W036 122 aa9.89□□□□□ -0.83
PRPF39-202ENST00000424478 EGFEM1PQ0D2K5 195 aa9.89□□□□□ -0.83
PRPF39-202ENST00000424478 FOXI2Q6ZQN5 318 aa9.89□□□□□ -0.83
PRPF39-202ENST00000424478 XCL2Q9UBD3 114 aa9.89□□□□□ -0.83
PRPF39-202ENST00000424478 HLA-DRB4P13762 266 aa9.89□□□□□ -0.83
PRPF39-202ENST00000424478 ZNF80P51504 273 aaPredicted RBP9.89□□□□□ -0.83
PRPF39-202ENST00000424478 BTN1A1Q13410 526 aa9.89□□□□□ -0.83
PRPF39-202ENST00000424478 LINC00322Q6ZN03 302 aaPredicted RBP9.89□□□□□ -0.83
PRPF39-202ENST00000424478 TMEM75Q8N9X5 138 aa9.89□□□□□ -0.83
PRPF39-202ENST00000424478 PRELID1Q9Y255 219 aa9.89□□□□□ -0.83
PRPF39-202ENST00000424478 HLA-DRB4X5D2U9 266 aa9.89□□□□□ -0.83
PRPF39-202ENST00000424478 IGHV4-30-4P0DP06 118 aa9.89□□□□□ -0.83
PRPF39-202ENST00000424478 BAGE2Q86Y30 109 aa9.89□□□□□ -0.83
PRPF39-202ENST00000424478 OCC1Q8TAD7 63 aa9.89□□□□□ -0.83
PRPF39-202ENST00000424478 IGF2BP2-AS1Q96M15 143 aa9.89□□□□□ -0.83
PRPF39-202ENST00000424478 PPP1R14DQ9NXH3 145 aa9.89□□□□□ -0.83
PRPF39-202ENST00000424478 COL7A1Q02388 2944 aa9.88□□□□□ -0.83
PRPF39-202ENST00000424478 NPIPB6E9PJ23 425 aa9.88□□□□□ -0.83
PRPF39-202ENST00000424478 TMEM250H0YL14 139 aa9.88□□□□□ -0.83
PRPF39-202ENST00000424478 K7EN84 100 aa9.88□□□□□ -0.83
PRPF39-202ENST00000424478 GNG4P50150 75 aa9.88□□□□□ -0.83
PRPF39-202ENST00000424478 TMEM183BQ1AE95 376 aa9.88□□□□□ -0.83
PRPF39-202ENST00000424478 ZC2HC1AQ96GY0 325 aa9.88□□□□□ -0.83
PRPF39-202ENST00000424478 IGLV2-8P01709 118 aa9.88□□□□□ -0.83
PRPF39-202ENST00000424478 ZNF138P52744 262 aa9.88□□□□□ -0.83
PRPF39-202ENST00000424478 AMTNQ6UX39 209 aa9.88□□□□□ -0.83
PRPF39-202ENST00000424478 C9orf47Q6ZRZ4 202 aa9.88□□□□□ -0.83
PRPF39-202ENST00000424478 MRPL53Q96EL3 112 aaKnown RBP9.88□□□□□ -0.83
PRPF39-202ENST00000424478 ZNF492Q9P255 531 aa9.88□□□□□ -0.83
PRPF39-202ENST00000424478 K7EQM0 130 aa9.87□□□□□ -0.83
PRPF39-202ENST00000424478 RNASE4P34096 147 aaKnown RBP9.87□□□□□ -0.83
PRPF39-202ENST00000424478 IGHV3OR16-12A0A075B7B8 117 aa9.87□□□□□ -0.83
PRPF39-202ENST00000424478 HTN1P15515 57 aa9.87□□□□□ -0.83
PRPF39-202ENST00000424478 TAGLN2P37802 199 aaKnown RBP9.87□□□□□ -0.83
PRPF39-202ENST00000424478 TUBA4BQ9H853 241 aa9.87□□□□□ -0.83
PRPF39-202ENST00000424478 KLF12Q9Y4X4 402 aa9.87□□□□□ -0.83
PRPF39-202ENST00000424478 ATP6V1G1O75348 118 aa9.87□□□□□ -0.83
PRPF39-202ENST00000424478 RBMY1A1P0DJD3 496 aaKnown RBP9.87□□□□□ -0.83
PRPF39-202ENST00000424478 RBMY1CP0DJD4 496 aa9.87□□□□□ -0.83
PRPF39-202ENST00000424478 RBMY1FQ15415 496 aaKnown RBP9.87□□□□□ -0.83
PRPF39-202ENST00000424478 ADIRFQ15847 76 aa9.87□□□□□ -0.83
PRPF39-202ENST00000424478 SAMD13Q5VXD3 122 aa9.87□□□□□ -0.83
PRPF39-202ENST00000424478 EIF4E3Q8N5X7 224 aaKnown RBP9.87□□□□□ -0.83
PRPF39-202ENST00000424478 FMC1Q96HJ9 113 aa9.87□□□□□ -0.83
PRPF39-202ENST00000424478 TXNDC17Q9BRA2 123 aa9.87□□□□□ -0.83
PRPF39-202ENST00000424478 TRAV12-3A0A0B4J271 114 aa9.86□□□□□ -0.83
PRPF39-202ENST00000424478 CRIP1P50238 77 aa9.86□□□□□ -0.83
PRPF39-202ENST00000424478 TRPT1Q86TN4 253 aaKnown RBP9.86□□□□□ -0.83
PRPF39-202ENST00000424478 PRKDCP78527 4128 aaKnown RBP9.86□□□□□ -0.83
PRPF39-202ENST00000424478 M0R036 132 aa9.86□□□□□ -0.83
PRPF39-202ENST00000424478 GCGP01275 180 aa9.86□□□□□ -0.83
PRPF39-202ENST00000424478 LTAP01374 205 aa9.86□□□□□ -0.83
PRPF39-202ENST00000424478 APOC3P02656 99 aa9.86□□□□□ -0.83
PRPF39-202ENST00000424478 MUC21Q5SSG8 566 aa9.86□□□□□ -0.83
PRPF39-202ENST00000424478 UQCC3Q6UW78 93 aa9.86□□□□□ -0.83
PRPF39-202ENST00000424478 ZFAND2AQ8N6M9 145 aa9.86□□□□□ -0.83
PRPF39-202ENST00000424478 RNASE7Q9H1E1 156 aaKnown RBP9.86□□□□□ -0.83
PRPF39-202ENST00000424478 TMSB15BA0A087X1C1 80 aa9.85□□□□□ -0.83
PRPF39-202ENST00000424478 DEFB121Q5J5C9 76 aa9.85□□□□□ -0.83
PRPF39-202ENST00000424478 MRAPQ8TCY5 172 aa9.85□□□□□ -0.83
PRPF39-202ENST00000424478 NAGKQ9UJ70 344 aa9.85□□□□□ -0.83
PRPF39-202ENST00000424478 K7EIL1 84 aa9.85□□□□□ -0.83
PRPF39-202ENST00000424478 SPRY2O43597 315 aa9.85□□□□□ -0.83
PRPF39-202ENST00000424478 GPX1P07203 203 aa9.85□□□□□ -0.83
PRPF39-202ENST00000424478 GIG44P09565 113 aaPredicted RBP9.85□□□□□ -0.83
PRPF39-202ENST00000424478 RPL19P84098 196 aaKnown RBP9.85□□□□□ -0.83
PRPF39-202ENST00000424478 GFI1BQ5VTD9 330 aa9.85□□□□□ -0.83
PRPF39-202ENST00000424478 CRXO43186 299 aaPredicted RBP9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms