RNA–Protein interactions for RNA: ENST00000424265.5

USP54-205, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 5,201 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-205ENST00000424265 FGFRL1Q8N441 504 aa7.81□□□□□ -1.16
USP54-205ENST00000424265 CFHR4Q92496 578 aa7.81□□□□□ -1.16
USP54-205ENST00000424265 AJUBAQ96IF1 538 aa7.81□□□□□ -1.16
USP54-205ENST00000424265 HS3ST6Q96QI5 342 aa7.81□□□□□ -1.16
USP54-205ENST00000424265 SLC25A20O43772 301 aa7.81□□□□□ -1.16
USP54-205ENST00000424265 FGF6P10767 208 aa7.81□□□□□ -1.16
USP54-205ENST00000424265 DOCK7Q96N67 2140 aa7.81□□□□□ -1.16
USP54-205ENST00000424265 NCR2O95944 276 aa7.8□□□□□ -1.16
USP54-205ENST00000424265 COQ2Q96H96 371 aa7.8□□□□□ -1.16
USP54-205ENST00000424265 TCF19Q9Y242 345 aa7.8□□□□□ -1.16
USP54-205ENST00000424265 IGKV1D-13A0A0B4J2D9 117 aa7.8□□□□□ -1.16
USP54-205ENST00000424265 DPM2O94777 84 aa7.8□□□□□ -1.16
USP54-205ENST00000424265 IGKV1-13P0DP09 117 aa7.8□□□□□ -1.16
USP54-205ENST00000424265 DEFB113Q30KQ7 82 aa7.8□□□□□ -1.16
USP54-205ENST00000424265 NFE4Q86UQ8 179 aa7.8□□□□□ -1.16
USP54-205ENST00000424265 C8orf31Q8N9H6 132 aa7.8□□□□□ -1.16
USP54-205ENST00000424265 LINC00477Q96M19 166 aa7.8□□□□□ -1.16
USP54-205ENST00000424265 LINC01549A6NIU2 74 aa7.8□□□□□ -1.16
USP54-205ENST00000424265 CD7P09564 240 aa7.8□□□□□ -1.16
USP54-205ENST00000424265 C1orf195Q5TG92 126 aa7.8□□□□□ -1.16
USP54-205ENST00000424265 PRO0628Q9UI54 55 aa7.8□□□□□ -1.16
USP54-205ENST00000424265 PCNTO95613 3336 aa7.8□□□□□ -1.16
USP54-205ENST00000424265 TRBV25-1A0A075B6N4 114 aa7.8□□□□□ -1.16
USP54-205ENST00000424265 MSMBP08118 114 aa7.8□□□□□ -1.16
USP54-205ENST00000424265 H7C2G1 150 aa7.79□□□□□ -1.16
USP54-205ENST00000424265 CCL3L1P16619 93 aa7.79□□□□□ -1.16
USP54-205ENST00000424265 MALP21145 153 aa7.79□□□□□ -1.16
USP54-205ENST00000424265 LINC00311Q8N616 119 aa7.79□□□□□ -1.16
USP54-205ENST00000424265 MGST2Q99735 147 aa7.79□□□□□ -1.16
USP54-205ENST00000424265 FOXC2Q99958 501 aa7.79□□□□□ -1.16
USP54-205ENST00000424265 MDFICQ9P1T7 246 aa7.79□□□□□ -1.16
USP54-205ENST00000424265 WDR83OSQ9Y284 106 aa7.79□□□□□ -1.16
USP54-205ENST00000424265 H3BMM0 161 aa7.79□□□□□ -1.16
USP54-205ENST00000424265 EDN2P20800 178 aa7.79□□□□□ -1.16
USP54-205ENST00000424265 FAM120AOSQ5T036 256 aa7.79□□□□□ -1.16
USP54-205ENST00000424265 UBE2WQ96B02 151 aa7.79□□□□□ -1.16
USP54-205ENST00000424265 C11orf53Q8IXP5 236 aa7.79□□□□□ -1.16
USP54-205ENST00000424265 OR11H6Q8NGC7 330 aa7.79□□□□□ -1.16
USP54-205ENST00000424265 ACACBO00763 2458 aa7.79□□□□□ -1.16
USP54-205ENST00000424265 RRHO14718 337 aa7.79□□□□□ -1.16
USP54-205ENST00000424265 IGF2RP11717 2491 aa7.79□□□□□ -1.16
USP54-205ENST00000424265 MYMXA0A1B0GTQ4 84 aa7.78□□□□□ -1.16
USP54-205ENST00000424265 MBD6Q96DN6 1003 aa7.78□□□□□ -1.16
USP54-205ENST00000424265 RPL35AP18077 110 aaKnown RBP7.78□□□□□ -1.16
USP54-205ENST00000424265 Q6ZRM9 215 aa7.78□□□□□ -1.16
USP54-205ENST00000424265 MYOZ3Q8TDC0 251 aa7.78□□□□□ -1.16
USP54-205ENST00000424265 LTAP01374 205 aa7.78□□□□□ -1.16
USP54-205ENST00000424265 NTN5Q8WTR8 489 aaPredicted RBP7.78□□□□□ -1.16
USP54-205ENST00000424265 PCNX3Q9H6A9 2034 aa7.78□□□□□ -1.16
USP54-205ENST00000424265 NPYP01303 97 aa7.78□□□□□ -1.16
USP54-205ENST00000424265 SLC25A48Q6ZT89 311 aaKnown RBP7.78□□□□□ -1.16
USP54-205ENST00000424265 SAA2P0DJI9 122 aaPredicted RBP7.77□□□□□ -1.16
USP54-205ENST00000424265 MIR17HGQ75NE6 70 aa7.77□□□□□ -1.16
USP54-205ENST00000424265 TRAV13-1A0A0B4J241 112 aa7.77□□□□□ -1.17
USP54-205ENST00000424265 PLA2G2AP14555 144 aa7.77□□□□□ -1.17
USP54-205ENST00000424265 UBE2E1P51965 193 aa7.77□□□□□ -1.17
USP54-205ENST00000424265 VMO1Q7Z5L0 202 aa7.77□□□□□ -1.17
USP54-205ENST00000424265 METRNQ9UJH8 293 aa7.77□□□□□ -1.17
USP54-205ENST00000424265 MED12LQ86YW9 2145 aa7.77□□□□□ -1.17
USP54-205ENST00000424265 COX7A2P2O60397 106 aa7.77□□□□□ -1.17
USP54-205ENST00000424265 LOXP28300 417 aaPredicted RBP7.76□□□□□ -1.17
USP54-205ENST00000424265 ZC2HC1BQ5TFG8 222 aa7.76□□□□□ -1.17
USP54-205ENST00000424265 LYPD2Q6UXB3 125 aa7.76□□□□□ -1.17
USP54-205ENST00000424265 TRPT1Q86TN4 253 aaKnown RBP7.76□□□□□ -1.17
USP54-205ENST00000424265 LINC01587Q99440 93 aa7.76□□□□□ -1.17
USP54-205ENST00000424265 MRPL20Q9BYC9 149 aaKnown RBP7.76□□□□□ -1.17
USP54-205ENST00000424265 DUTP33316 252 aaKnown RBP7.76□□□□□ -1.17
USP54-205ENST00000424265 RPS28P62857 69 aaKnown RBP7.76□□□□□ -1.17
USP54-205ENST00000424265 C10orf105Q8TEF2 133 aa7.76□□□□□ -1.17
USP54-205ENST00000424265 NBASA2RRP1 2371 aa7.76□□□□□ -1.17
USP54-205ENST00000424265 IGHV4-39P01824 125 aa7.76□□□□□ -1.17
USP54-205ENST00000424265 FXYD7P58549 80 aa7.76□□□□□ -1.17
USP54-205ENST00000424265 RPL39P5Q59GN2 51 aa7.76□□□□□ -1.17
USP54-205ENST00000424265 RASL10AQ92737 203 aa7.76□□□□□ -1.17
USP54-205ENST00000424265 IFI27L2Q9H2X8 130 aa7.76□□□□□ -1.17
USP54-205ENST00000424265 PEX7O00628 323 aa7.76□□□□□ -1.17
USP54-205ENST00000424265 IFI27P40305 119 aaPredicted RBP7.76□□□□□ -1.17
USP54-205ENST00000424265 FOXE3Q13461 319 aa7.76□□□□□ -1.17
USP54-205ENST00000424265 Q6ZQT7 251 aa7.76□□□□□ -1.17
USP54-205ENST00000424265 FAM231DQ6ZW35 169 aa7.76□□□□□ -1.17
USP54-205ENST00000424265 LEAP2Q969E1 77 aa7.76□□□□□ -1.17
USP54-205ENST00000424265 C17orf98A8MV24 154 aa7.75□□□□□ -1.17
USP54-205ENST00000424265 IGKV1-5P01602 117 aa7.75□□□□□ -1.17
USP54-205ENST00000424265 C4orf26Q17RF5 130 aa7.75□□□□□ -1.17
USP54-205ENST00000424265 KHDC1LQ5JSQ8 128 aa7.75□□□□□ -1.17
USP54-205ENST00000424265 PRO0461Q9UI25 63 aa7.75□□□□□ -1.17
USP54-205ENST00000424265 RBAKDNA6NC62 111 aa7.75□□□□□ -1.17
USP54-205ENST00000424265 C15orf62A8K5M9 175 aa7.75□□□□□ -1.17
USP54-205ENST00000424265 NBR2O15453 112 aa7.75□□□□□ -1.17
USP54-205ENST00000424265 LGALS1P09382 135 aaKnown RBP7.75□□□□□ -1.17
USP54-205ENST00000424265 ATXN8Q156A1 80 aa7.75□□□□□ -1.17
USP54-205ENST00000424265 KIAA2026Q5HYC2 2103 aa7.75□□□□□ -1.17
USP54-205ENST00000424265 LINC00527Q9UJ94 153 aa7.75□□□□□ -1.17
USP54-205ENST00000424265 A0A1B0GUT8 65 aa7.75□□□□□ -1.17
USP54-205ENST00000424265 DKK2Q9UBU2 259 aa7.75□□□□□ -1.17
USP54-205ENST00000424265 HAX1O00165 279 aa7.75□□□□□ -1.17
USP54-205ENST00000424265 NDUFC2O95298 119 aa7.75□□□□□ -1.17
USP54-205ENST00000424265 CKS2P33552 79 aa7.75□□□□□ -1.17
USP54-205ENST00000424265 CRLF1O75462 422 aa7.75□□□□□ -1.17
USP54-205ENST00000424265 GDF5OSQ5U4N7 250 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms