RNA–Protein interactions for RNA: ENST00000422392.6

CDH1-202, Transcript of cadherin 1, humanhuman

TSL 1 (best) BASIC

Gene CDH1, Length 2,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-202ENST00000422392 A0A1W2PPR1 153 aa12.25□□□□□ -0.45
CDH1-202ENST00000422392 COX8AP10176 69 aa12.25□□□□□ -0.45
CDH1-202ENST00000422392 CKS2P33552 79 aa12.25□□□□□ -0.45
CDH1-202ENST00000422392 SAPCD1Q5SSQ6 148 aa12.25□□□□□ -0.45
CDH1-202ENST00000422392 U3KQK5 164 aa12.25□□□□□ -0.45
CDH1-202ENST00000422392 SPTAN1Q13813 2472 aaKnown RBP12.25□□□□□ -0.45
CDH1-202ENST00000422392 NHLH1Q02575 133 aa12.25□□□□□ -0.45
CDH1-202ENST00000422392 C15orf32Q32M92 178 aa12.25□□□□□ -0.45
CDH1-202ENST00000422392 CCDC144NLQ6NUI1 221 aa12.25□□□□□ -0.45
CDH1-202ENST00000422392 C12orf54Q6X4T0 127 aa12.25□□□□□ -0.45
CDH1-202ENST00000422392 DEFB125Q8N687 156 aa12.25□□□□□ -0.45
CDH1-202ENST00000422392 Q8N9W7 124 aa12.25□□□□□ -0.45
CDH1-202ENST00000422392 IGHV3-49A0A0A0MS15 119 aa12.25□□□□□ -0.45
CDH1-202ENST00000422392 HIST1H1AQ02539 215 aaPredicted RBP12.25□□□□□ -0.45
CDH1-202ENST00000422392 LINC01548A6NM66 108 aa12.24□□□□□ -0.45
CDH1-202ENST00000422392 CLEC3BP05452 202 aa12.24□□□□□ -0.45
CDH1-202ENST00000422392 PRSS57Q6UWY2 283 aa12.24□□□□□ -0.45
CDH1-202ENST00000422392 CBY1Q9Y3M2 126 aa12.24□□□□□ -0.45
CDH1-202ENST00000422392 IGLC6P0CF74 106 aa12.23□□□□□ -0.45
CDH1-202ENST00000422392 C18orf15Q96N68 181 aa12.23□□□□□ -0.45
CDH1-202ENST00000422392 CRYBG3Q68DQ2 2970 aa12.23□□□□□ -0.45
CDH1-202ENST00000422392 G3V318 75 aa12.23□□□□□ -0.45
CDH1-202ENST00000422392 ZNF207O43670 478 aaKnown RBP12.23□□□□□ -0.45
CDH1-202ENST00000422392 UQCRFS1P47985 274 aa12.23□□□□□ -0.45
CDH1-202ENST00000422392 PAX8Q06710 450 aa12.23□□□□□ -0.45
CDH1-202ENST00000422392 AMMECR1LQ6DCA0 310 aa12.23□□□□□ -0.45
CDH1-202ENST00000422392 TMEM190Q8WZ59 177 aa12.23□□□□□ -0.45
CDH1-202ENST00000422392 CELSR2Q9HCU4 2923 aa12.22□□□□□ -0.45
CDH1-202ENST00000422392 ATP6V0E1O15342 81 aa12.22□□□□□ -0.45
CDH1-202ENST00000422392 HBDP02042 147 aa12.22□□□□□ -0.45
CDH1-202ENST00000422392 FGF6P10767 208 aa12.22□□□□□ -0.45
CDH1-202ENST00000422392 IL17RELQ6ZVW7 336 aa12.22□□□□□ -0.45
CDH1-202ENST00000422392 SELENOKQ9Y6D0 94 aa12.22□□□□□ -0.45
CDH1-202ENST00000422392 GATA1P15976 413 aaPredicted RBP12.22□□□□□ -0.45
CDH1-202ENST00000422392 EVI2AP22794 236 aa12.22□□□□□ -0.45
CDH1-202ENST00000422392 EBI3Q14213 229 aa12.22□□□□□ -0.45
CDH1-202ENST00000422392 COX8CQ7Z4L0 72 aa12.22□□□□□ -0.45
CDH1-202ENST00000422392 RAXQ9Y2V3 346 aa12.22□□□□□ -0.45
CDH1-202ENST00000422392 BMI1P35226 326 aa12.21□□□□□ -0.45
CDH1-202ENST00000422392 CLEC19AQ6UXS0 136 aa12.21□□□□□ -0.45
CDH1-202ENST00000422392 TRAV8-6A0A0B4J262 113 aa12.21□□□□□ -0.46
CDH1-202ENST00000422392 RBX1P62877 108 aa12.21□□□□□ -0.46
CDH1-202ENST00000422392 ZNF502Q8TBZ5 544 aa12.21□□□□□ -0.46
CDH1-202ENST00000422392 RNF185Q96GF1 192 aa12.21□□□□□ -0.46
CDH1-202ENST00000422392 SIRPDQ9H106 197 aa12.21□□□□□ -0.46
CDH1-202ENST00000422392 ZFAND3Q9H8U3 227 aa12.21□□□□□ -0.46
CDH1-202ENST00000422392 Q6ZQT7 251 aa12.2□□□□□ -0.46
CDH1-202ENST00000422392 IFI27L1Q96BM0 104 aa12.2□□□□□ -0.46
CDH1-202ENST00000422392 DKK2Q9UBU2 259 aa12.2□□□□□ -0.46
CDH1-202ENST00000422392 BUB3O43684 328 aa12.2□□□□□ -0.46
CDH1-202ENST00000422392 LGALS9BQ3B8N2 356 aa12.2□□□□□ -0.46
CDH1-202ENST00000422392 LGALS9CQ6DKI2 356 aa12.2□□□□□ -0.46
CDH1-202ENST00000422392 AJUBAQ96IF1 538 aa12.2□□□□□ -0.46
CDH1-202ENST00000422392 PSMG3-AS1Q96PY0 264 aa12.2□□□□□ -0.46
CDH1-202ENST00000422392 ITPR1Q14643 2758 aa12.19□□□□□ -0.46
CDH1-202ENST00000422392 FABP5P3A8MUU1 101 aa12.19□□□□□ -0.46
CDH1-202ENST00000422392 MINOS1Q5TGZ0 78 aa12.19□□□□□ -0.46
CDH1-202ENST00000422392 CCDC140Q96MF4 163 aa12.19□□□□□ -0.46
CDH1-202ENST00000422392 MINOS1-NBL1R4GNA1 71 aa12.19□□□□□ -0.46
CDH1-202ENST00000422392 CLPSL1A2RUU4 121 aa12.19□□□□□ -0.46
CDH1-202ENST00000422392 CD5LO43866 347 aa12.19□□□□□ -0.46
CDH1-202ENST00000422392 PCP4P48539 62 aa12.19□□□□□ -0.46
CDH1-202ENST00000422392 TMEM97Q5BJF2 176 aa12.19□□□□□ -0.46
CDH1-202ENST00000422392 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.19□□□□□ -0.46
CDH1-202ENST00000422392 C1orf122Q6ZSJ8 110 aa12.19□□□□□ -0.46
CDH1-202ENST00000422392 C11orf21Q9P2W6 132 aa12.19□□□□□ -0.46
CDH1-202ENST00000422392 C7orf71A4D174 169 aa12.18□□□□□ -0.46
CDH1-202ENST00000422392 SCGB2A1O75556 95 aa12.18□□□□□ -0.46
CDH1-202ENST00000422392 SAA4P35542 130 aa12.18□□□□□ -0.46
CDH1-202ENST00000422392 PCP2Q8IVA1 136 aa12.18□□□□□ -0.46
CDH1-202ENST00000422392 ABCA2Q9BZC7 2435 aa12.18□□□□□ -0.46
CDH1-202ENST00000422392 K7EP13 123 aa12.18□□□□□ -0.46
CDH1-202ENST00000422392 NMUP48645 174 aa12.18□□□□□ -0.46
CDH1-202ENST00000422392 RPS20P60866 119 aaKnown RBP12.18□□□□□ -0.46
CDH1-202ENST00000422392 FAM110DQ8TAY7 271 aaPredicted RBP12.18□□□□□ -0.46
CDH1-202ENST00000422392 NAA38Q9BRA0 125 aaKnown RBP12.18□□□□□ -0.46
CDH1-202ENST00000422392 LINC00527Q9UJ94 153 aa12.18□□□□□ -0.46
CDH1-202ENST00000422392 OOSP1A8MZH6 123 aa12.17□□□□□ -0.46
CDH1-202ENST00000422392 IGKV3D-20A0A0C4DH25 116 aa12.17□□□□□ -0.46
CDH1-202ENST00000422392 KLRB1Q12918 225 aa12.17□□□□□ -0.46
CDH1-202ENST00000422392 RNF151Q2KHN1 245 aa12.17□□□□□ -0.46
CDH1-202ENST00000422392 UBTD1Q9HAC8 227 aa12.17□□□□□ -0.46
CDH1-202ENST00000422392 TNFRSF6BO95407 300 aa12.16□□□□□ -0.46
CDH1-202ENST00000422392 TRGV3P03979 118 aa12.16□□□□□ -0.46
CDH1-202ENST00000422392 LEPP41159 167 aa12.16□□□□□ -0.46
CDH1-202ENST00000422392 AGPAT4-IT1Q9H0P7 198 aa12.16□□□□□ -0.46
CDH1-202ENST00000422392 TMEM219Q86XT9 240 aa12.16□□□□□ -0.46
CDH1-202ENST00000422392 BOD1L2Q8IYS8 172 aa12.16□□□□□ -0.46
CDH1-202ENST00000422392 MAP1LC3AQ9H492 121 aa12.16□□□□□ -0.46
CDH1-202ENST00000422392 IGHV3OR16-10A0A075B7F0 116 aa12.15□□□□□ -0.46
CDH1-202ENST00000422392 GOSR1O95249 250 aa12.15□□□□□ -0.46
CDH1-202ENST00000422392 DTX2Q86UW9 622 aa12.15□□□□□ -0.46
CDH1-202ENST00000422392 ARL6IP6Q8N6S5 226 aa12.15□□□□□ -0.46
CDH1-202ENST00000422392 TTTY13Q9BZ97 58 aa12.15□□□□□ -0.46
CDH1-202ENST00000422392 TRAV8-2A0A0B4J237 113 aa12.15□□□□□ -0.47
CDH1-202ENST00000422392 SMAD7O15105 426 aaKnown RBP12.15□□□□□ -0.47
CDH1-202ENST00000422392 CNFNQ9BYD5 112 aa12.15□□□□□ -0.47
CDH1-202ENST00000422392 TRAV26-2A0A0B4J265 109 aa12.14□□□□□ -0.47
CDH1-202ENST00000422392 FBLL1A6NHQ2 334 aaKnown RBP12.14□□□□□ -0.47
CDH1-202ENST00000422392 UBE2E1P51965 193 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms