RNA–Protein interactions for RNA: ENST00000422245.5

SQSTM1-203, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-203ENST00000422245 ABCA13Q86UQ4 5058 aa8.03□□□□□ -1.12
SQSTM1-203ENST00000422245 A0A0J9YY99 117 aa8.03□□□□□ -1.12
SQSTM1-203ENST00000422245 PYYP10082 97 aa8.03□□□□□ -1.12
SQSTM1-203ENST00000422245 HOXA5P20719 270 aa8.03□□□□□ -1.12
SQSTM1-203ENST00000422245 S100ZQ8WXG8 99 aa8.03□□□□□ -1.12
SQSTM1-203ENST00000422245 FAM19A4Q96LR4 140 aa8.03□□□□□ -1.12
SQSTM1-203ENST00000422245 LINC00477Q96M19 166 aa8.03□□□□□ -1.12
SQSTM1-203ENST00000422245 C18orf15Q96N68 181 aa8.03□□□□□ -1.12
SQSTM1-203ENST00000422245 UPK3BQ9BT76 320 aa8.03□□□□□ -1.12
SQSTM1-203ENST00000422245 SLC25A31Q9H0C2 315 aa8.03□□□□□ -1.12
SQSTM1-203ENST00000422245 TMPRSS5Q9H3S3 457 aa8.03□□□□□ -1.12
SQSTM1-203ENST00000422245 Q9H8V8 135 aa8.03□□□□□ -1.12
SQSTM1-203ENST00000422245 TRGV2A0A075B6R0 118 aa8.02□□□□□ -1.13
SQSTM1-203ENST00000422245 A0A1W2PPQ1 181 aa8.02□□□□□ -1.13
SQSTM1-203ENST00000422245 C16orf90A8MZG2 172 aa8.02□□□□□ -1.13
SQSTM1-203ENST00000422245 NMBP08949 121 aa8.02□□□□□ -1.13
SQSTM1-203ENST00000422245 CRISP2P16562 243 aa8.02□□□□□ -1.13
SQSTM1-203ENST00000422245 ERCC8Q13216 396 aa8.02□□□□□ -1.13
SQSTM1-203ENST00000422245 ANXA2RQ3ZCQ2 193 aa8.02□□□□□ -1.13
SQSTM1-203ENST00000422245 GCSAMLQ5JQS6 135 aa8.02□□□□□ -1.13
SQSTM1-203ENST00000422245 Q6ZTI0 123 aa8.02□□□□□ -1.13
SQSTM1-203ENST00000422245 EIF4E3Q8N5X7 224 aaKnown RBP8.02□□□□□ -1.13
SQSTM1-203ENST00000422245 C11orf72Q8NBR9 251 aa8.02□□□□□ -1.13
SQSTM1-203ENST00000422245 OR5C1Q8NGR4 320 aa8.02□□□□□ -1.13
SQSTM1-203ENST00000422245 THAP6Q8TBB0 222 aa8.02□□□□□ -1.13
SQSTM1-203ENST00000422245 ENKURQ8TC29 256 aa8.02□□□□□ -1.13
SQSTM1-203ENST00000422245 BLNKQ8WV28 456 aa8.02□□□□□ -1.13
SQSTM1-203ENST00000422245 SLC25A2Q9BXI2 301 aa8.02□□□□□ -1.13
SQSTM1-203ENST00000422245 AGPAT4-IT1Q9H0P7 198 aa8.02□□□□□ -1.13
SQSTM1-203ENST00000422245 Q9H3A6 140 aa8.02□□□□□ -1.13
SQSTM1-203ENST00000422245 MRPS16Q9Y3D3 137 aaKnown RBP8.02□□□□□ -1.13
SQSTM1-203ENST00000422245 E5RGE8 158 aa8.01□□□□□ -1.13
SQSTM1-203ENST00000422245 ZNF324O75467 553 aaPredicted RBP8.01□□□□□ -1.13
SQSTM1-203ENST00000422245 BTF3P20290 206 aaKnown RBP8.01□□□□□ -1.13
SQSTM1-203ENST00000422245 BTN1A1Q13410 526 aa8.01□□□□□ -1.13
SQSTM1-203ENST00000422245 TMEM78Q5T7P6 136 aa8.01□□□□□ -1.13
SQSTM1-203ENST00000422245 C9orf47Q6ZRZ4 202 aa8.01□□□□□ -1.13
SQSTM1-203ENST00000422245 EXOC3-AS1Q8N2X6 119 aa8.01□□□□□ -1.13
SQSTM1-203ENST00000422245 MRPL32Q9BYC8 188 aaKnown RBP8.01□□□□□ -1.13
SQSTM1-203ENST00000422245 NMES1Q9C002 83 aa8.01□□□□□ -1.13
SQSTM1-203ENST00000422245 GSN-AS1Q9NRJ2 163 aa8.01□□□□□ -1.13
SQSTM1-203ENST00000422245 IGKV2-40A0A087WW87 121 aaPredicted RBP8□□□□□ -1.13
SQSTM1-203ENST00000422245 TRGV1A0A0A0MS02 117 aa8□□□□□ -1.13
SQSTM1-203ENST00000422245 PRAF2O60831 178 aa8□□□□□ -1.13
SQSTM1-203ENST00000422245 CDK2AP2O75956 126 aa8□□□□□ -1.13
SQSTM1-203ENST00000422245 IGKV2D-40P01614 121 aaPredicted RBP8□□□□□ -1.13
SQSTM1-203ENST00000422245 GPX1P07203 203 aa8□□□□□ -1.13
SQSTM1-203ENST00000422245 RNASE4P34096 147 aaKnown RBP8□□□□□ -1.13
SQSTM1-203ENST00000422245 TCL1AP56279 114 aa8□□□□□ -1.13
SQSTM1-203ENST00000422245 NHLH2Q02577 135 aa8□□□□□ -1.13
SQSTM1-203ENST00000422245 CD300CQ08708 224 aa8□□□□□ -1.13
SQSTM1-203ENST00000422245 ICAM4Q14773 271 aa8□□□□□ -1.13
SQSTM1-203ENST00000422245 IBA57Q5T440 356 aaKnown RBP8□□□□□ -1.13
SQSTM1-203ENST00000422245 FAM122CQ6P4D5 195 aa8□□□□□ -1.13
SQSTM1-203ENST00000422245 MIR17HGQ75NE6 70 aa8□□□□□ -1.13
SQSTM1-203ENST00000422245 FAM167A-AS1Q96KT0 104 aa8□□□□□ -1.13
SQSTM1-203ENST00000422245 KRTAP1-5Q9BYS1 174 aa8□□□□□ -1.13
SQSTM1-203ENST00000422245 FUT9Q9Y231 359 aa8□□□□□ -1.13
SQSTM1-203ENST00000422245 TRBV7-9A0A0J9YWB2 115 aa7.99□□□□□ -1.13
SQSTM1-203ENST00000422245 C17orf112F2Z3M2 114 aa7.99□□□□□ -1.13
SQSTM1-203ENST00000422245 RGS13O14921 159 aa7.99□□□□□ -1.13
SQSTM1-203ENST00000422245 SPINK4O60575 86 aa7.99□□□□□ -1.13
SQSTM1-203ENST00000422245 SIX6O95475 246 aa7.99□□□□□ -1.13
SQSTM1-203ENST00000422245 NBEAP1P0C6P0 100 aa7.99□□□□□ -1.13
SQSTM1-203ENST00000422245 CYCSP99999 105 aaKnown RBP7.99□□□□□ -1.13
SQSTM1-203ENST00000422245 ESRGQ1W209 222 aa7.99□□□□□ -1.13
SQSTM1-203ENST00000422245 LRRC37A5PQ49AS3 106 aa7.99□□□□□ -1.13
SQSTM1-203ENST00000422245 ZFAND2AQ8N6M9 145 aa7.99□□□□□ -1.13
SQSTM1-203ENST00000422245 ARPC5LQ9BPX5 153 aa7.99□□□□□ -1.13
SQSTM1-203ENST00000422245 PAXXQ9BUH6 204 aa7.99□□□□□ -1.13
SQSTM1-203ENST00000422245 WDR61Q9GZS3 305 aaKnown RBP7.99□□□□□ -1.13
SQSTM1-203ENST00000422245 OR51M1Q9H341 326 aa7.99□□□□□ -1.13
SQSTM1-203ENST00000422245 ZNF492Q9P255 531 aa7.99□□□□□ -1.13
SQSTM1-203ENST00000422245 IGHV1OR15-1A0A075B7D0 117 aa7.98□□□□□ -1.13
SQSTM1-203ENST00000422245 UPK1BO75841 260 aa7.98□□□□□ -1.13
SQSTM1-203ENST00000422245 ZNF138P52744 262 aa7.98□□□□□ -1.13
SQSTM1-203ENST00000422245 PRR9Q5T870 116 aa7.98□□□□□ -1.13
SQSTM1-203ENST00000422245 FXYD5Q96DB9 178 aa7.98□□□□□ -1.13
SQSTM1-203ENST00000422245 PHYHIPLQ96FC7 376 aa7.98□□□□□ -1.13
SQSTM1-203ENST00000422245 VSIG2Q96IQ7 327 aa7.98□□□□□ -1.13
SQSTM1-203ENST00000422245 ST6GAL2Q96JF0 529 aa7.98□□□□□ -1.13
SQSTM1-203ENST00000422245 VGLL1Q99990 258 aa7.98□□□□□ -1.13
SQSTM1-203ENST00000422245 OR5AC2Q9NZP5 309 aa7.98□□□□□ -1.13
SQSTM1-203ENST00000422245 A0A096LPF7 62 aa7.97□□□□□ -1.13
SQSTM1-203ENST00000422245 RBAKDNA6NC62 111 aa7.97□□□□□ -1.13
SQSTM1-203ENST00000422245 H0YIZ8 118 aa7.97□□□□□ -1.13
SQSTM1-203ENST00000422245 OR7C2O60412 319 aa7.97□□□□□ -1.13
SQSTM1-203ENST00000422245 OR10J4P0C629 311 aa7.97□□□□□ -1.13
SQSTM1-203ENST00000422245 PET100P0DJ07 73 aa7.97□□□□□ -1.13
SQSTM1-203ENST00000422245 CSN1S1P47710 185 aa7.97□□□□□ -1.13
SQSTM1-203ENST00000422245 UBE2L3P68036 154 aaKnown RBP7.97□□□□□ -1.13
SQSTM1-203ENST00000422245 ZNF415Q09FC8 603 aa7.97□□□□□ -1.13
SQSTM1-203ENST00000422245 LYPD1Q8N2G4 141 aa7.97□□□□□ -1.13
SQSTM1-203ENST00000422245 ATP5SQ99766 215 aa7.97□□□□□ -1.13
SQSTM1-203ENST00000422245 KLF12Q9Y4X4 402 aa7.97□□□□□ -1.13
SQSTM1-203ENST00000422245 ICOSQ9Y6W8 199 aa7.97□□□□□ -1.13
SQSTM1-203ENST00000422245 INMT-MINDY4F8WBC2 141 aa7.96□□□□□ -1.14
SQSTM1-203ENST00000422245 PAX4O43316 350 aa7.96□□□□□ -1.14
SQSTM1-203ENST00000422245 SLAQ13239 276 aa7.96□□□□□ -1.14
SQSTM1-203ENST00000422245 KHDC3LQ587J8 217 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms