RNA–Protein interactions for RNA: ENST00000421263.1

VARS2-202, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 460 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-202ENST00000421263 UPK3BQ9BT76 320 aa13.1□□□□□ -0.31
VARS2-202ENST00000421263 AGPAT4-IT1Q9H0P7 198 aa13.1□□□□□ -0.31
VARS2-202ENST00000421263 A0A0J9YY99 117 aa13.09□□□□□ -0.31
VARS2-202ENST00000421263 C7orf71A4D174 169 aa13.09□□□□□ -0.31
VARS2-202ENST00000421263 FGF7P21781 194 aa13.09□□□□□ -0.31
VARS2-202ENST00000421263 Q6ZTI0 123 aa13.09□□□□□ -0.31
VARS2-202ENST00000421263 C11orf72Q8NBR9 251 aa13.09□□□□□ -0.31
VARS2-202ENST00000421263 KRTAP4-5Q9BYR2 181 aa13.09□□□□□ -0.31
VARS2-202ENST00000421263 PYYP10082 97 aa13.08□□□□□ -0.32
VARS2-202ENST00000421263 CRISP2P16562 243 aa13.08□□□□□ -0.32
VARS2-202ENST00000421263 ANXA2RQ3ZCQ2 193 aa13.08□□□□□ -0.32
VARS2-202ENST00000421263 GCSAMLQ5JQS6 135 aa13.08□□□□□ -0.32
VARS2-202ENST00000421263 C9orf47Q6ZRZ4 202 aa13.08□□□□□ -0.32
VARS2-202ENST00000421263 NPCDR1Q9BY65 106 aa13.08□□□□□ -0.32
VARS2-202ENST00000421263 KRTAP1-5Q9BYS1 174 aa13.08□□□□□ -0.32
VARS2-202ENST00000421263 GPN1Q9HCN4 374 aaPredicted RBP13.08□□□□□ -0.32
VARS2-202ENST00000421263 TIMM9Q9Y5J7 89 aa13.08□□□□□ -0.32
VARS2-202ENST00000421263 DNAH5Q8TE73 4624 aa13.08□□□□□ -0.32
VARS2-202ENST00000421263 APOBP04114 4563 aaKnown RBP13.07□□□□□ -0.32
VARS2-202ENST00000421263 NMBP08949 121 aa13.07□□□□□ -0.32
VARS2-202ENST00000421263 NHLH2Q02577 135 aa13.07□□□□□ -0.32
VARS2-202ENST00000421263 CD300CQ08708 224 aa13.07□□□□□ -0.32
VARS2-202ENST00000421263 EXOC3-AS1Q8N2X6 119 aa13.07□□□□□ -0.32
VARS2-202ENST00000421263 ZNF680Q8NEM1 530 aa13.07□□□□□ -0.32
VARS2-202ENST00000421263 VSIG2Q96IQ7 327 aa13.07□□□□□ -0.32
VARS2-202ENST00000421263 FAM167A-AS1Q96KT0 104 aa13.07□□□□□ -0.32
VARS2-202ENST00000421263 SLC25A2Q9BXI2 301 aa13.07□□□□□ -0.32
VARS2-202ENST00000421263 Q9H3A6 140 aa13.07□□□□□ -0.32
VARS2-202ENST00000421263 TMPRSS5Q9H3S3 457 aa13.07□□□□□ -0.32
VARS2-202ENST00000421263 GSN-AS1Q9NRJ2 163 aa13.07□□□□□ -0.32
VARS2-202ENST00000421263 C16orf90A8MZG2 172 aa13.06□□□□□ -0.32
VARS2-202ENST00000421263 CDK2AP2O75956 126 aa13.06□□□□□ -0.32
VARS2-202ENST00000421263 ASAH1Q13510 395 aa13.06□□□□□ -0.32
VARS2-202ENST00000421263 MZT2BQ6NZ67 158 aa13.06□□□□□ -0.32
VARS2-202ENST00000421263 EIF4E3Q8N5X7 224 aaKnown RBP13.06□□□□□ -0.32
VARS2-202ENST00000421263 MRPS16Q9Y3D3 137 aaKnown RBP13.06□□□□□ -0.32
VARS2-202ENST00000421263 A0A1W2PPQ1 181 aa13.05□□□□□ -0.32
VARS2-202ENST00000421263 BTN1A1Q13410 526 aa13.05□□□□□ -0.32
VARS2-202ENST00000421263 TTC32Q5I0X7 151 aa13.05□□□□□ -0.32
VARS2-202ENST00000421263 OR5C1Q8NGR4 320 aa13.05□□□□□ -0.32
VARS2-202ENST00000421263 BLNKQ8WV28 456 aa13.05□□□□□ -0.32
VARS2-202ENST00000421263 AAMDCQ9H7C9 122 aa13.05□□□□□ -0.32
VARS2-202ENST00000421263 A0A096LPF7 62 aa13.04□□□□□ -0.32
VARS2-202ENST00000421263 SPINK4O60575 86 aa13.04□□□□□ -0.32
VARS2-202ENST00000421263 NBEAP1P0C6P0 100 aa13.04□□□□□ -0.32
VARS2-202ENST00000421263 BTF3P20290 206 aaKnown RBP13.04□□□□□ -0.32
VARS2-202ENST00000421263 RNASE4P34096 147 aaKnown RBP13.04□□□□□ -0.32
VARS2-202ENST00000421263 ICAM4Q14773 271 aa13.04□□□□□ -0.32
VARS2-202ENST00000421263 MIR17HGQ75NE6 70 aa13.04□□□□□ -0.32
VARS2-202ENST00000421263 ZFAND2AQ8N6M9 145 aa13.04□□□□□ -0.32
VARS2-202ENST00000421263 THAP6Q8TBB0 222 aa13.04□□□□□ -0.32
VARS2-202ENST00000421263 KLF12Q9Y4X4 402 aa13.04□□□□□ -0.32
VARS2-202ENST00000421263 TRGV2A0A075B6R0 118 aa13.03□□□□□ -0.32
VARS2-202ENST00000421263 E5RGE8 158 aa13.03□□□□□ -0.32
VARS2-202ENST00000421263 GPX1P07203 203 aa13.03□□□□□ -0.32
VARS2-202ENST00000421263 TCL1AP56279 114 aa13.03□□□□□ -0.32
VARS2-202ENST00000421263 IBA57Q5T440 356 aaKnown RBP13.03□□□□□ -0.32
VARS2-202ENST00000421263 VGLL1Q99990 258 aa13.03□□□□□ -0.32
VARS2-202ENST00000421263 NMES1Q9C002 83 aa13.03□□□□□ -0.32
VARS2-202ENST00000421263 SLC25A31Q9H0C2 315 aa13.03□□□□□ -0.32
VARS2-202ENST00000421263 OR51M1Q9H341 326 aa13.03□□□□□ -0.32
VARS2-202ENST00000421263 ZNF492Q9P255 531 aa13.03□□□□□ -0.32
VARS2-202ENST00000421263 FUT9Q9Y231 359 aa13.03□□□□□ -0.32
VARS2-202ENST00000421263 H0YIZ8 118 aa13.02□□□□□ -0.33
VARS2-202ENST00000421263 SIX6O95475 246 aa13.02□□□□□ -0.33
VARS2-202ENST00000421263 PRR9Q5T870 116 aa13.02□□□□□ -0.33
VARS2-202ENST00000421263 S100ZQ8WXG8 99 aa13.02□□□□□ -0.33
VARS2-202ENST00000421263 WDR61Q9GZS3 305 aaKnown RBP13.02□□□□□ -0.33
VARS2-202ENST00000421263 OR5AC2Q9NZP5 309 aa13.02□□□□□ -0.33
VARS2-202ENST00000421263 IGKV2-40A0A087WW87 121 aaPredicted RBP13.01□□□□□ -0.33
VARS2-202ENST00000421263 TRGV1A0A0A0MS02 117 aa13.01□□□□□ -0.33
VARS2-202ENST00000421263 TRBV7-9A0A0J9YWB2 115 aa13.01□□□□□ -0.33
VARS2-202ENST00000421263 IGKV2D-40P01614 121 aaPredicted RBP13.01□□□□□ -0.33
VARS2-202ENST00000421263 TMEM78Q5T7P6 136 aa13.01□□□□□ -0.33
VARS2-202ENST00000421263 FAM122CQ6P4D5 195 aa13.01□□□□□ -0.33
VARS2-202ENST00000421263 Q6ZQT7 251 aa13.01□□□□□ -0.33
VARS2-202ENST00000421263 FXYD5Q96DB9 178 aa13.01□□□□□ -0.33
VARS2-202ENST00000421263 MRPL32Q9BYC8 188 aaKnown RBP13.01□□□□□ -0.33
VARS2-202ENST00000421263 TP53TG3Q9ULZ0 132 aa13.01□□□□□ -0.33
VARS2-202ENST00000421263 IGHV1OR15-1A0A075B7D0 117 aa12.99□□□□□ -0.33
VARS2-202ENST00000421263 SPATA12Q7Z6I5 190 aa12.99□□□□□ -0.33
VARS2-202ENST00000421263 ST6GAL2Q96JF0 529 aa12.99□□□□□ -0.33
VARS2-202ENST00000421263 PAXXQ9BUH6 204 aa12.99□□□□□ -0.33
VARS2-202ENST00000421263 RGS13O14921 159 aa12.98□□□□□ -0.33
VARS2-202ENST00000421263 ZNF138P52744 262 aa12.98□□□□□ -0.33
VARS2-202ENST00000421263 CYCSP99999 105 aaKnown RBP12.98□□□□□ -0.33
VARS2-202ENST00000421263 IFITM3Q01628 133 aa12.98□□□□□ -0.33
VARS2-202ENST00000421263 LYPD1Q8N2G4 141 aa12.98□□□□□ -0.33
VARS2-202ENST00000421263 KCNIP2Q9NS61 270 aa12.98□□□□□ -0.33
VARS2-202ENST00000421263 RBAKDNA6NC62 111 aa12.97□□□□□ -0.33
VARS2-202ENST00000421263 PRAF2O60831 178 aa12.97□□□□□ -0.33
VARS2-202ENST00000421263 UPK1BO75841 260 aa12.97□□□□□ -0.33
VARS2-202ENST00000421263 OR10J4P0C629 311 aa12.97□□□□□ -0.33
VARS2-202ENST00000421263 LRRC37A5PQ49AS3 106 aa12.97□□□□□ -0.33
VARS2-202ENST00000421263 ENKURQ8TC29 256 aa12.97□□□□□ -0.33
VARS2-202ENST00000421263 PHYHIPLQ96FC7 376 aa12.97□□□□□ -0.33
VARS2-202ENST00000421263 C17orf112F2Z3M2 114 aa12.96□□□□□ -0.33
VARS2-202ENST00000421263 PAX4O43316 350 aa12.96□□□□□ -0.33
VARS2-202ENST00000421263 H2BFSP57053 126 aa12.96□□□□□ -0.33
VARS2-202ENST00000421263 KRTAP10-2P60368 255 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms