RNA–Protein interactions for RNA: ENST00000420646.6

SNCA-206, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-206ENST00000420646 GOSR1O95249 250 aa6.76□□□□□ -1.33
SNCA-206ENST00000420646 HLA-DQA1P01909 254 aa6.76□□□□□ -1.33
SNCA-206ENST00000420646 NPSP0C0P6 89 aa6.76□□□□□ -1.33
SNCA-206ENST00000420646 SRD5A1P18405 259 aa6.76□□□□□ -1.33
SNCA-206ENST00000420646 NDUFAF3Q9BU61 184 aa6.76□□□□□ -1.33
SNCA-206ENST00000420646 NBEAL1Q6ZS30 2694 aa6.76□□□□□ -1.33
SNCA-206ENST00000420646 A0A1W2PS18 150 aa6.76□□□□□ -1.33
SNCA-206ENST00000420646 J3KRW8 73 aa6.76□□□□□ -1.33
SNCA-206ENST00000420646 C18orf32Q8TCD1 76 aa6.76□□□□□ -1.33
SNCA-206ENST00000420646 TXN2Q99757 166 aa6.76□□□□□ -1.33
SNCA-206ENST00000420646 A0A096LNT2 108 aa6.76□□□□□ -1.33
SNCA-206ENST00000420646 K7EQM0 130 aa6.76□□□□□ -1.33
SNCA-206ENST00000420646 PPIFP30405 207 aaKnown RBP6.76□□□□□ -1.33
SNCA-206ENST00000420646 ARL3P36405 182 aa6.76□□□□□ -1.33
SNCA-206ENST00000420646 CSN1S1P47710 185 aa6.76□□□□□ -1.33
SNCA-206ENST00000420646 AMTP48728 403 aa6.76□□□□□ -1.33
SNCA-206ENST00000420646 C19orf54Q5BKX5 351 aa6.76□□□□□ -1.33
SNCA-206ENST00000420646 WNK1Q9H4A3 2382 aa6.75□□□□□ -1.33
SNCA-206ENST00000420646 A0A1B0GXF2 115 aa6.75□□□□□ -1.33
SNCA-206ENST00000420646 KRTDAPP60985 99 aa6.75□□□□□ -1.33
SNCA-206ENST00000420646 RPL11P62913 178 aaKnown RBP6.75□□□□□ -1.33
SNCA-206ENST00000420646 HBBP68871 147 aa6.75□□□□□ -1.33
SNCA-206ENST00000420646 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.75□□□□□ -1.33
SNCA-206ENST00000420646 RBPMS2Q6ZRY4 209 aaKnown RBP6.75□□□□□ -1.33
SNCA-206ENST00000420646 IL17RELQ6ZVW7 336 aa6.75□□□□□ -1.33
SNCA-206ENST00000420646 LYPD1Q8N2G4 141 aa6.75□□□□□ -1.33
SNCA-206ENST00000420646 NPIPB6E9PJ23 425 aa6.75□□□□□ -1.33
SNCA-206ENST00000420646 SH2D1AO60880 128 aa6.75□□□□□ -1.33
SNCA-206ENST00000420646 IGHG2P01859 326 aa6.75□□□□□ -1.33
SNCA-206ENST00000420646 MT-ND6P03923 174 aa6.75□□□□□ -1.33
SNCA-206ENST00000420646 Q0VG73 95 aa6.75□□□□□ -1.33
SNCA-206ENST00000420646 PDE6HQ13956 83 aa6.75□□□□□ -1.33
SNCA-206ENST00000420646 PRR25Q96S07 402 aa6.75□□□□□ -1.33
SNCA-206ENST00000420646 ZNF492Q9P255 531 aa6.75□□□□□ -1.33
SNCA-206ENST00000420646 RNF24Q9Y225 148 aa6.75□□□□□ -1.33
SNCA-206ENST00000420646 TIMM8BQ9Y5J9 83 aaPredicted RBP6.75□□□□□ -1.33
SNCA-206ENST00000420646 TRBV7-1A0A0A6YYK4 115 aa6.74□□□□□ -1.33
SNCA-206ENST00000420646 TMEM213A2RRL7 107 aa6.74□□□□□ -1.33
SNCA-206ENST00000420646 IGF1P05019 195 aa6.74□□□□□ -1.33
SNCA-206ENST00000420646 GPX1P07203 203 aa6.74□□□□□ -1.33
SNCA-206ENST00000420646 CSN3P07498 182 aa6.74□□□□□ -1.33
SNCA-206ENST00000420646 PSG9Q00887 426 aa6.74□□□□□ -1.33
SNCA-206ENST00000420646 TM4SF20Q53R12 229 aa6.74□□□□□ -1.33
SNCA-206ENST00000420646 LINC01356Q8N9X3 169 aa6.74□□□□□ -1.33
SNCA-206ENST00000420646 METTL26Q96S19 204 aa6.74□□□□□ -1.33
SNCA-206ENST00000420646 ALKBH7Q9BT30 221 aaPredicted RBP6.74□□□□□ -1.33
SNCA-206ENST00000420646 BEX4Q9NWD9 120 aaPredicted RBP6.74□□□□□ -1.33
SNCA-206ENST00000420646 ZFP30Q9Y2G7 519 aa6.74□□□□□ -1.33
SNCA-206ENST00000420646 STAB1Q9NY15 2570 aa6.74□□□□□ -1.33
SNCA-206ENST00000420646 TRAV8-2A0A0B4J237 113 aa6.74□□□□□ -1.33
SNCA-206ENST00000420646 RNASEKQ6P5S7 137 aaKnown RBP6.74□□□□□ -1.33
SNCA-206ENST00000420646 ZNF575Q86XF7 245 aa6.74□□□□□ -1.33
SNCA-206ENST00000420646 OR4X2Q8NGF9 303 aa6.74□□□□□ -1.33
SNCA-206ENST00000420646 SNHG12Q9BXW3 62 aa6.74□□□□□ -1.33
SNCA-206ENST00000420646 SPRY2O43597 315 aa6.74□□□□□ -1.33
SNCA-206ENST00000420646 CT45A10P0DMU9 189 aa6.74□□□□□ -1.33
SNCA-206ENST00000420646 RAB4AP20338 218 aa6.74□□□□□ -1.33
SNCA-206ENST00000420646 C8orf86Q6ZUL3 223 aa6.74□□□□□ -1.33
SNCA-206ENST00000420646 SIGLECL1Q8N7X8 197 aa6.74□□□□□ -1.33
SNCA-206ENST00000420646 SMIM12Q96EX1 92 aa6.74□□□□□ -1.33
SNCA-206ENST00000420646 NRN1Q9NPD7 142 aa6.74□□□□□ -1.33
SNCA-206ENST00000420646 SCGB2A1O75556 95 aa6.73□□□□□ -1.33
SNCA-206ENST00000420646 Q5PR19 223 aa6.73□□□□□ -1.33
SNCA-206ENST00000420646 LYZL1Q6UWQ5 148 aa6.73□□□□□ -1.33
SNCA-206ENST00000420646 ATOH7Q8N100 152 aa6.73□□□□□ -1.33
SNCA-206ENST00000420646 WIPF2Q8TF74 440 aaPredicted RBP6.73□□□□□ -1.33
SNCA-206ENST00000420646 URB1-AS1Q96HZ7 61 aa6.73□□□□□ -1.33
SNCA-206ENST00000420646 Q96MF0 132 aa6.73□□□□□ -1.33
SNCA-206ENST00000420646 MSRB1Q9NZV6 116 aa6.73□□□□□ -1.33
SNCA-206ENST00000420646 F6UB75 175 aa6.73□□□□□ -1.33
SNCA-206ENST00000420646 ORM1P02763 201 aa6.73□□□□□ -1.33
SNCA-206ENST00000420646 RAB9AP51151 201 aa6.73□□□□□ -1.33
SNCA-206ENST00000420646 S100A7AQ86SG5 101 aa6.73□□□□□ -1.33
SNCA-206ENST00000420646 GLMPQ8WWB7 406 aa6.73□□□□□ -1.33
SNCA-206ENST00000420646 WFDC12Q8WWY7 111 aa6.73□□□□□ -1.33
SNCA-206ENST00000420646 C20orf173Q96LM9 149 aa6.73□□□□□ -1.33
SNCA-206ENST00000420646 AGPAT4-IT1Q9H0P7 198 aa6.73□□□□□ -1.33
SNCA-206ENST00000420646 NAGKQ9UJ70 344 aa6.73□□□□□ -1.33
SNCA-206ENST00000420646 SERTM2A0A1B0GWG4 89 aa6.72□□□□□ -1.33
SNCA-206ENST00000420646 KCNS1Q96KK3 526 aa6.72□□□□□ -1.33
SNCA-206ENST00000420646 TMEM208Q9BTX3 173 aa6.72□□□□□ -1.33
SNCA-206ENST00000420646 MCRIP2Q9BUT9 160 aaKnown RBP6.72□□□□□ -1.33
SNCA-206ENST00000420646 GOLT1BQ9Y3E0 138 aa6.72□□□□□ -1.33
SNCA-206ENST00000420646 CR1P17927 2039 aa6.72□□□□□ -1.33
SNCA-206ENST00000420646 FN1P02751 2386 aaKnown RBP6.72□□□□□ -1.33
SNCA-206ENST00000420646 A0A1B0GUT8 65 aa6.72□□□□□ -1.33
SNCA-206ENST00000420646 TMEM189A5PLL7 270 aa6.72□□□□□ -1.33
SNCA-206ENST00000420646 SLC25A16P16260 332 aa6.72□□□□□ -1.33
SNCA-206ENST00000420646 DMRTA1Q5VZB9 504 aa6.72□□□□□ -1.33
SNCA-206ENST00000420646 NIT1Q86X76 327 aa6.72□□□□□ -1.33
SNCA-206ENST00000420646 ZNF324O75467 553 aaPredicted RBP6.72□□□□□ -1.33
SNCA-206ENST00000420646 IGHV4-31P0DP07 118 aa6.72□□□□□ -1.33
SNCA-206ENST00000420646 KIR3DS1Q14943 382 aa6.72□□□□□ -1.33
SNCA-206ENST00000420646 CT83Q5H943 113 aa6.72□□□□□ -1.33
SNCA-206ENST00000420646 OR10J3Q5JRS4 329 aa6.72□□□□□ -1.33
SNCA-206ENST00000420646 FAM162BQ5T6X4 162 aa6.72□□□□□ -1.33
SNCA-206ENST00000420646 C16orf54Q6UWD8 224 aa6.72□□□□□ -1.33
SNCA-206ENST00000420646 LINC00173Q6ZV60 143 aa6.72□□□□□ -1.33
SNCA-206ENST00000420646 GPHB5Q86YW7 130 aa6.72□□□□□ -1.33
SNCA-206ENST00000420646 C16orf92Q96LL3 132 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms