RNA–Protein interactions for RNA: ENST00000420101.6

SEMA4D-204, Transcript of semaphorin 4D, humanhuman

TSL 1 (best) BASIC

Gene SEMA4D, Length 1,837 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-204ENST00000420101 CRYGCP07315 174 aa11.59□□□□□ -0.55
SEMA4D-204ENST00000420101 CSN3P07498 182 aa11.59□□□□□ -0.55
SEMA4D-204ENST00000420101 GP9P14770 177 aa11.59□□□□□ -0.55
SEMA4D-204ENST00000420101 ZNF138P52744 262 aa11.59□□□□□ -0.55
SEMA4D-204ENST00000420101 LCNL1Q6ZST4 164 aa11.59□□□□□ -0.55
SEMA4D-204ENST00000420101 TMEM75Q8N9X5 138 aa11.59□□□□□ -0.55
SEMA4D-204ENST00000420101 ZNF502Q8TBZ5 544 aa11.59□□□□□ -0.55
SEMA4D-204ENST00000420101 RNF5Q99942 180 aa11.59□□□□□ -0.55
SEMA4D-204ENST00000420101 TM2D2Q9BX73 214 aa11.59□□□□□ -0.55
SEMA4D-204ENST00000420101 SIGLEC9Q9Y336 463 aa11.59□□□□□ -0.55
SEMA4D-204ENST00000420101 IGHV3OR16-10A0A075B7F0 116 aa11.58□□□□□ -0.56
SEMA4D-204ENST00000420101 OOSP1A8MZH6 123 aa11.58□□□□□ -0.56
SEMA4D-204ENST00000420101 MLANAQ16655 118 aa11.58□□□□□ -0.56
SEMA4D-204ENST00000420101 LYPD1Q8N2G4 141 aa11.58□□□□□ -0.56
SEMA4D-204ENST00000420101 A0A096LNJ9 63 aa11.58□□□□□ -0.56
SEMA4D-204ENST00000420101 SNAI2O43623 268 aa11.58□□□□□ -0.56
SEMA4D-204ENST00000420101 MSMBP08118 114 aa11.58□□□□□ -0.56
SEMA4D-204ENST00000420101 SAA4P35542 130 aa11.58□□□□□ -0.56
SEMA4D-204ENST00000420101 RPL27AP46776 148 aaKnown RBP11.58□□□□□ -0.56
SEMA4D-204ENST00000420101 PAX8Q06710 450 aa11.58□□□□□ -0.56
SEMA4D-204ENST00000420101 PPP1R27Q86WC6 154 aa11.58□□□□□ -0.56
SEMA4D-204ENST00000420101 ORMDL3Q8N138 153 aa11.58□□□□□ -0.56
SEMA4D-204ENST00000420101 DYNAPQ8N1N2 210 aa11.58□□□□□ -0.56
SEMA4D-204ENST00000420101 OR8A1Q8NGG7 326 aa11.58□□□□□ -0.56
SEMA4D-204ENST00000420101 RAB37Q96AX2 223 aa11.58□□□□□ -0.56
SEMA4D-204ENST00000420101 IFI27L1Q96BM0 104 aa11.58□□□□□ -0.56
SEMA4D-204ENST00000420101 NCBP2LA6PVI3 153 aaKnown RBP11.57□□□□□ -0.56
SEMA4D-204ENST00000420101 B4DSR2 109 aa11.57□□□□□ -0.56
SEMA4D-204ENST00000420101 E9PLD3 99 aa11.57□□□□□ -0.56
SEMA4D-204ENST00000420101 NPFFO15130 113 aa11.57□□□□□ -0.56
SEMA4D-204ENST00000420101 NBR2O15453 112 aa11.57□□□□□ -0.56
SEMA4D-204ENST00000420101 CNIH1O95406 144 aa11.57□□□□□ -0.56
SEMA4D-204ENST00000420101 DEFB113Q30KQ7 82 aa11.57□□□□□ -0.56
SEMA4D-204ENST00000420101 CFHR4Q92496 578 aa11.57□□□□□ -0.56
SEMA4D-204ENST00000420101 MRAP2Q96G30 205 aa11.57□□□□□ -0.56
SEMA4D-204ENST00000420101 MCRIP2Q9BUT9 160 aaKnown RBP11.57□□□□□ -0.56
SEMA4D-204ENST00000420101 SPANXB1Q9NS25 103 aaPredicted RBP11.57□□□□□ -0.56
SEMA4D-204ENST00000420101 BEX4Q9NWD9 120 aaPredicted RBP11.57□□□□□ -0.56
SEMA4D-204ENST00000420101 FAM208BQ5VWN6 2430 aa11.57□□□□□ -0.56
SEMA4D-204ENST00000420101 LINC01546A6NGU7 62 aa11.56□□□□□ -0.56
SEMA4D-204ENST00000420101 E7EUB6 86 aa11.56□□□□□ -0.56
SEMA4D-204ENST00000420101 CACNG7P62955 275 aa11.56□□□□□ -0.56
SEMA4D-204ENST00000420101 SMAGPQ0VAQ4 97 aa11.56□□□□□ -0.56
SEMA4D-204ENST00000420101 ASPHD1Q5U4P2 390 aa11.56□□□□□ -0.56
SEMA4D-204ENST00000420101 HIST2H2BCQ6DN03 193 aa11.56□□□□□ -0.56
SEMA4D-204ENST00000420101 CIARTQ8N365 385 aaPredicted RBP11.56□□□□□ -0.56
SEMA4D-204ENST00000420101 PIP4P2Q8N4L2 257 aa11.56□□□□□ -0.56
SEMA4D-204ENST00000420101 GTSF1LQ9H1H1 148 aa11.56□□□□□ -0.56
SEMA4D-204ENST00000420101 COL12A1Q99715 3063 aa11.56□□□□□ -0.56
SEMA4D-204ENST00000420101 TRAV40A0A0B4J280 105 aa11.56□□□□□ -0.56
SEMA4D-204ENST00000420101 CENPVL3A0A0U1RRI6 287 aa11.56□□□□□ -0.56
SEMA4D-204ENST00000420101 CRYGBP07316 175 aa11.56□□□□□ -0.56
SEMA4D-204ENST00000420101 APELAP0DMC3 54 aa11.56□□□□□ -0.56
SEMA4D-204ENST00000420101 CKS1BP61024 79 aa11.56□□□□□ -0.56
SEMA4D-204ENST00000420101 FAM104BQ5XKR9 115 aa11.56□□□□□ -0.56
SEMA4D-204ENST00000420101 TMEM116Q8NCL8 245 aa11.56□□□□□ -0.56
SEMA4D-204ENST00000420101 PRELID3AQ96N28 172 aa11.56□□□□□ -0.56
SEMA4D-204ENST00000420101 ZMAT4Q9H898 229 aa11.56□□□□□ -0.56
SEMA4D-204ENST00000420101 HIF1ANQ9NWT6 349 aa11.56□□□□□ -0.56
SEMA4D-204ENST00000420101 TSSC4Q9Y5U2 329 aaPredicted RBP11.56□□□□□ -0.56
SEMA4D-204ENST00000420101 FLNCQ14315 2725 aa11.55□□□□□ -0.56
SEMA4D-204ENST00000420101 ARMS2P0C7Q2 107 aa11.55□□□□□ -0.56
SEMA4D-204ENST00000420101 FAM106CPP0CH98 169 aa11.55□□□□□ -0.56
SEMA4D-204ENST00000420101 IFI27P40305 119 aaPredicted RBP11.55□□□□□ -0.56
SEMA4D-204ENST00000420101 FOXE3Q13461 319 aa11.55□□□□□ -0.56
SEMA4D-204ENST00000420101 RUSC1-AS1Q66K80 236 aa11.55□□□□□ -0.56
SEMA4D-204ENST00000420101 BCL6BQ8N143 479 aaPredicted RBP11.55□□□□□ -0.56
SEMA4D-204ENST00000420101 ATP6V0E2Q8NHE4 81 aa11.55□□□□□ -0.56
SEMA4D-204ENST00000420101 PHLDA1Q8WV24 401 aaPredicted RBP11.55□□□□□ -0.56
SEMA4D-204ENST00000420101 SRSF12Q8WXF0 261 aaKnown RBP11.55□□□□□ -0.56
SEMA4D-204ENST00000420101 SLC25A39Q9BZJ4 359 aaPredicted RBP11.55□□□□□ -0.56
SEMA4D-204ENST00000420101 VCX2Q9H322 139 aa11.55□□□□□ -0.56
SEMA4D-204ENST00000420101 DCHS2Q6V1P9 2916 aa11.55□□□□□ -0.56
SEMA4D-204ENST00000420101 SERTM2A0A1B0GWG4 89 aa11.54□□□□□ -0.56
SEMA4D-204ENST00000420101 IGLV2-11P01706 119 aa11.54□□□□□ -0.56
SEMA4D-204ENST00000420101 ORM2P19652 201 aa11.54□□□□□ -0.56
SEMA4D-204ENST00000420101 EVI2AP22794 236 aa11.54□□□□□ -0.56
SEMA4D-204ENST00000420101 MAPK1IP1LQ8NDC0 245 aa11.54□□□□□ -0.56
SEMA4D-204ENST00000420101 ZC2HC1AQ96GY0 325 aa11.54□□□□□ -0.56
SEMA4D-204ENST00000420101 CGB1A6NKQ9 187 aa11.53□□□□□ -0.56
SEMA4D-204ENST00000420101 RNF223E7ERA6 249 aa11.53□□□□□ -0.56
SEMA4D-204ENST00000420101 LINC01619G3V211 115 aa11.53□□□□□ -0.56
SEMA4D-204ENST00000420101 NMUP48645 174 aa11.53□□□□□ -0.56
SEMA4D-204ENST00000420101 RAB9AP51151 201 aa11.53□□□□□ -0.56
SEMA4D-204ENST00000420101 WT1-ASQ06250 92 aa11.53□□□□□ -0.56
SEMA4D-204ENST00000420101 Q5PR19 223 aa11.53□□□□□ -0.56
SEMA4D-204ENST00000420101 BRD3OSQ6XYD6 125 aa11.53□□□□□ -0.56
SEMA4D-204ENST00000420101 ZNF48Q96MX3 618 aaPredicted RBP11.53□□□□□ -0.56
SEMA4D-204ENST00000420101 HIGD1AQ9Y241 93 aa11.53□□□□□ -0.56
SEMA4D-204ENST00000420101 UBR5O95071 2799 aaPredicted RBP11.53□□□□□ -0.56
SEMA4D-204ENST00000420101 IGHV1-69DA0A0B4J2H0 117 aa11.53□□□□□ -0.56
SEMA4D-204ENST00000420101 IGHV1-69P01742 117 aa11.53□□□□□ -0.56
SEMA4D-204ENST00000420101 SSBP2P81877 361 aaPredicted RBP11.53□□□□□ -0.56
SEMA4D-204ENST00000420101 MRGPRG-AS1Q2M3A8 158 aa11.53□□□□□ -0.56
SEMA4D-204ENST00000420101 CEND1Q8N111 149 aa11.53□□□□□ -0.56
SEMA4D-204ENST00000420101 LINC01356Q8N9X3 169 aa11.53□□□□□ -0.56
SEMA4D-204ENST00000420101 NPBQ8NG41 125 aa11.53□□□□□ -0.56
SEMA4D-204ENST00000420101 CHAC1Q9BUX1 264 aa11.53□□□□□ -0.56
SEMA4D-204ENST00000420101 TIMM8BQ9Y5J9 83 aaPredicted RBP11.53□□□□□ -0.56
SEMA4D-204ENST00000420101 ATP5LO75964 103 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 98.8 ms