RNA–Protein interactions for RNA: ENST00000419459.1

LINC00642-201, long intergenic non-protein coding RNA 642, humanhuman

TSL 2 BASIC

Gene LINC00642, Length 2,026 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-201ENST00000419459 LINC01545Q5VT33 79 aa10.06□□□□□ -0.8
LINC00642-201ENST00000419459 TEX29Q8N6K0 151 aa10.06□□□□□ -0.8
LINC00642-201ENST00000419459 Q8N9W7 124 aa10.06□□□□□ -0.8
LINC00642-201ENST00000419459 MLST8Q9BVC4 326 aa10.06□□□□□ -0.8
LINC00642-201ENST00000419459 TEX50A0A1B0GTY4 177 aa10.06□□□□□ -0.8
LINC00642-201ENST00000419459 A6NDX4 124 aa10.06□□□□□ -0.8
LINC00642-201ENST00000419459 CORTO00230 105 aa10.06□□□□□ -0.8
LINC00642-201ENST00000419459 CRYGBP07316 175 aa10.06□□□□□ -0.8
LINC00642-201ENST00000419459 SRSF2Q01130 221 aaKnown RBP10.06□□□□□ -0.8
LINC00642-201ENST00000419459 RBPMS2Q6ZRY4 209 aaKnown RBP10.06□□□□□ -0.8
LINC00642-201ENST00000419459 Q6ZS46 218 aa10.06□□□□□ -0.8
LINC00642-201ENST00000419459 NPBQ8NG41 125 aa10.06□□□□□ -0.8
LINC00642-201ENST00000419459 FXYD5Q96DB9 178 aa10.06□□□□□ -0.8
LINC00642-201ENST00000419459 FMC1Q96HJ9 113 aa10.06□□□□□ -0.8
LINC00642-201ENST00000419459 EPDR1Q9UM22 224 aa10.06□□□□□ -0.8
LINC00642-201ENST00000419459 LOC102724200A0A096LPH7 203 aaPredicted RBP10.05□□□□□ -0.8
LINC00642-201ENST00000419459 BLCAPP62952 87 aa10.05□□□□□ -0.8
LINC00642-201ENST00000419459 ERHP84090 104 aaKnown RBP10.05□□□□□ -0.8
LINC00642-201ENST00000419459 NDPQ00604 133 aa10.05□□□□□ -0.8
LINC00642-201ENST00000419459 BPIFA4PQ86YQ2 179 aa10.05□□□□□ -0.8
LINC00642-201ENST00000419459 C5orf56Q8N8D9 126 aa10.05□□□□□ -0.8
LINC00642-201ENST00000419459 VSTM2AQ8TAG5 236 aa10.05□□□□□ -0.8
LINC00642-201ENST00000419459 VPREB3Q9UKI3 123 aa10.05□□□□□ -0.8
LINC00642-201ENST00000419459 C2CD3Q4AC94 2353 aa10.05□□□□□ -0.8
LINC00642-201ENST00000419459 C7orf71A4D174 169 aa10.04□□□□□ -0.8
LINC00642-201ENST00000419459 C19orf71A6NCJ1 209 aa10.04□□□□□ -0.8
LINC00642-201ENST00000419459 DNAJC9-AS1A6NH13 148 aa10.04□□□□□ -0.8
LINC00642-201ENST00000419459 LINC01548A6NM66 108 aa10.04□□□□□ -0.8
LINC00642-201ENST00000419459 P01737 135 aa10.04□□□□□ -0.8
LINC00642-201ENST00000419459 OR10W1Q8NGF6 305 aa10.04□□□□□ -0.8
LINC00642-201ENST00000419459 TMEM167AQ8TBQ9 72 aa10.04□□□□□ -0.8
LINC00642-201ENST00000419459 RNF5Q99942 180 aa10.04□□□□□ -0.8
LINC00642-201ENST00000419459 MOB4Q9Y3A3 225 aa10.04□□□□□ -0.8
LINC00642-201ENST00000419459 TRAV5A0A0B4J249 113 aa10.04□□□□□ -0.8
LINC00642-201ENST00000419459 TRAV8-6A0A0B4J262 113 aa10.04□□□□□ -0.8
LINC00642-201ENST00000419459 TCRBV4S1A1TA0A5B7 111 aa10.04□□□□□ -0.8
LINC00642-201ENST00000419459 GAGE10A6NGK3 116 aa10.04□□□□□ -0.8
LINC00642-201ENST00000419459 TMEM238C9JI98 176 aa10.04□□□□□ -0.8
LINC00642-201ENST00000419459 MORN5Q5VZ52 161 aa10.04□□□□□ -0.8
LINC00642-201ENST00000419459 UFSP1Q6NVU6 142 aa10.04□□□□□ -0.8
LINC00642-201ENST00000419459 TEX45Q8NA69 505 aa10.04□□□□□ -0.8
LINC00642-201ENST00000419459 THAP8Q8NA92 274 aa10.04□□□□□ -0.8
LINC00642-201ENST00000419459 A6NDN8 102 aa10.03□□□□□ -0.8
LINC00642-201ENST00000419459 CGB1A6NKQ9 187 aa10.03□□□□□ -0.8
LINC00642-201ENST00000419459 H3BRM9 83 aa10.03□□□□□ -0.8
LINC00642-201ENST00000419459 HAX1O00165 279 aa10.03□□□□□ -0.8
LINC00642-201ENST00000419459 CHEK1O14757 476 aa10.03□□□□□ -0.8
LINC00642-201ENST00000419459 CIDEAO60543 219 aa10.03□□□□□ -0.8
LINC00642-201ENST00000419459 LTAP01374 205 aa10.03□□□□□ -0.8
LINC00642-201ENST00000419459 PYYP10082 97 aa10.03□□□□□ -0.8
LINC00642-201ENST00000419459 TMEM97Q5BJF2 176 aa10.03□□□□□ -0.8
LINC00642-201ENST00000419459 C5orf17Q8NAS9 161 aa10.03□□□□□ -0.8
LINC00642-201ENST00000419459 RASL11BQ9BPW5 248 aa10.03□□□□□ -0.8
LINC00642-201ENST00000419459 NDUFA4L2Q9NRX3 87 aa10.03□□□□□ -0.8
LINC00642-201ENST00000419459 LINC00527Q9UJ94 153 aa10.03□□□□□ -0.8
LINC00642-201ENST00000419459 ATRQ13535 2644 aa10.03□□□□□ -0.8
LINC00642-201ENST00000419459 NPIPB6E9PJ23 425 aa10.02□□□□□ -0.8
LINC00642-201ENST00000419459 CNIH1O95406 144 aa10.02□□□□□ -0.8
LINC00642-201ENST00000419459 SLC25A5P05141 298 aaKnown RBP10.02□□□□□ -0.8
LINC00642-201ENST00000419459 NBEAP1P0C6P0 100 aa10.02□□□□□ -0.8
LINC00642-201ENST00000419459 SUB1P53999 127 aaKnown RBP eCLIP10.02□□□□□ -0.8
LINC00642-201ENST00000419459 FOXA3P55318 350 aaPredicted RBP10.02□□□□□ -0.8
LINC00642-201ENST00000419459 TMEM95Q3KNT9 176 aa10.02□□□□□ -0.8
LINC00642-201ENST00000419459 LINC00173Q6ZV60 143 aa10.02□□□□□ -0.8
LINC00642-201ENST00000419459 C2orf91Q6ZV80 131 aa10.02□□□□□ -0.8
LINC00642-201ENST00000419459 GATD1Q8NB37 220 aa10.02□□□□□ -0.8
LINC00642-201ENST00000419459 OR1N2Q8NGR9 330 aa10.02□□□□□ -0.8
LINC00642-201ENST00000419459 SRSF12Q8WXF0 261 aaKnown RBP10.02□□□□□ -0.8
LINC00642-201ENST00000419459 AP1S3Q96PC3 154 aa10.02□□□□□ -0.8
LINC00642-201ENST00000419459 A0A087X0K7 114 aa10.02□□□□□ -0.81
LINC00642-201ENST00000419459 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.02□□□□□ -0.81
LINC00642-201ENST00000419459 IGHV7-81A0A0B4J1V7 117 aa10.02□□□□□ -0.81
LINC00642-201ENST00000419459 A0A1B0GW15 77 aa10.02□□□□□ -0.81
LINC00642-201ENST00000419459 CSN1S1P47710 185 aa10.02□□□□□ -0.81
LINC00642-201ENST00000419459 ERASQ7Z444 233 aa10.02□□□□□ -0.81
LINC00642-201ENST00000419459 FER1L6-AS1Q8NA97 138 aa10.02□□□□□ -0.81
LINC00642-201ENST00000419459 OR4A5Q8NH83 315 aa10.02□□□□□ -0.81
LINC00642-201ENST00000419459 GTSF1Q8WW33 167 aa10.02□□□□□ -0.81
LINC00642-201ENST00000419459 DAZAP1Q96EP5 407 aaKnown RBP10.02□□□□□ -0.81
LINC00642-201ENST00000419459 C9orf118A6NHY6 69 aa10.01□□□□□ -0.81
LINC00642-201ENST00000419459 CRLF1O75462 422 aa10.01□□□□□ -0.81
LINC00642-201ENST00000419459 PATE2Q6UY27 113 aa10.01□□□□□ -0.81
LINC00642-201ENST00000419459 G3V4G9 280 aa10□□□□□ -0.81
LINC00642-201ENST00000419459 SIVA1O15304 175 aa10□□□□□ -0.81
LINC00642-201ENST00000419459 ATP6V0E1O15342 81 aa10□□□□□ -0.81
LINC00642-201ENST00000419459 TP73-AS1Q9UF72 201 aa10□□□□□ -0.81
LINC00642-201ENST00000419459 TENM1Q9UKZ4 2725 aa10□□□□□ -0.81
LINC00642-201ENST00000419459 SMIM17P0DL12 118 aa10□□□□□ -0.81
LINC00642-201ENST00000419459 RPL27AP46776 148 aaKnown RBP10□□□□□ -0.81
LINC00642-201ENST00000419459 WT1-ASQ06250 92 aa10□□□□□ -0.81
LINC00642-201ENST00000419459 ZNF562Q6V9R5 426 aa10□□□□□ -0.81
LINC00642-201ENST00000419459 LINC00305Q7Z4B0 112 aa10□□□□□ -0.81
LINC00642-201ENST00000419459 OR5A1Q8NGJ0 315 aa10□□□□□ -0.81
LINC00642-201ENST00000419459 OR9G4Q8NGQ1 327 aa10□□□□□ -0.81
LINC00642-201ENST00000419459 ARPC1AQ92747 370 aa10□□□□□ -0.81
LINC00642-201ENST00000419459 PGLYRP4Q96LB8 373 aa10□□□□□ -0.81
LINC00642-201ENST00000419459 ZNF747Q9BV97 191 aa10□□□□□ -0.81
LINC00642-201ENST00000419459 AP5S1Q9NUS5 200 aa10□□□□□ -0.81
LINC00642-201ENST00000419459 FBN1P35555 2871 aaKnown RBP9.99□□□□□ -0.81
LINC00642-201ENST00000419459 TRBV6-1A0A0K0K1D8 114 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms