RNA–Protein interactions for RNA: ENST00000417656.6

SKA1-203, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2 BASIC

Gene SKA1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-203ENST00000417656 FHITP49789 147 aa9.02□□□□□ -0.97
SKA1-203ENST00000417656 FGF8P55075 233 aaPredicted RBP9.02□□□□□ -0.97
SKA1-203ENST00000417656 KIR3DS1Q14943 382 aa9.02□□□□□ -0.97
SKA1-203ENST00000417656 ZFAND6Q6FIF0 208 aa9.02□□□□□ -0.97
SKA1-203ENST00000417656 C9orf62Q8N4C0 152 aa9.02□□□□□ -0.97
SKA1-203ENST00000417656 ODF3Q96PU9 254 aa9.02□□□□□ -0.97
SKA1-203ENST00000417656 VGLL1Q99990 258 aa9.02□□□□□ -0.97
SKA1-203ENST00000417656 MAP1LC3BQ9GZQ8 125 aa9.02□□□□□ -0.97
SKA1-203ENST00000417656 PGPA6NDG6 321 aa9.01□□□□□ -0.97
SKA1-203ENST00000417656 LEPP41159 167 aa9.01□□□□□ -0.97
SKA1-203ENST00000417656 CSN1S1P47710 185 aa9.01□□□□□ -0.97
SKA1-203ENST00000417656 IL17DQ8TAD2 202 aa9.01□□□□□ -0.97
SKA1-203ENST00000417656 Q8TAT8 98 aa9.01□□□□□ -0.97
SKA1-203ENST00000417656 FAM213BQ8TBF2 198 aa9.01□□□□□ -0.97
SKA1-203ENST00000417656 SUN5Q8TC36 379 aa9.01□□□□□ -0.97
SKA1-203ENST00000417656 TMEM208Q9BTX3 173 aa9.01□□□□□ -0.97
SKA1-203ENST00000417656 AGPAT4-IT1Q9H0P7 198 aa9.01□□□□□ -0.97
SKA1-203ENST00000417656 TMEM167BQ9NRX6 74 aa9.01□□□□□ -0.97
SKA1-203ENST00000417656 DNAH7Q8WXX0 4024 aa9.01□□□□□ -0.97
SKA1-203ENST00000417656 UMAD1C9J7I0 102 aa9□□□□□ -0.97
SKA1-203ENST00000417656 DIRC3C9JPN6 131 aa9□□□□□ -0.97
SKA1-203ENST00000417656 TSPOP30536 169 aa9□□□□□ -0.97
SKA1-203ENST00000417656 GNG5P63218 68 aa9□□□□□ -0.97
SKA1-203ENST00000417656 FAM74A1Q5RGS3 127 aa9□□□□□ -0.97
SKA1-203ENST00000417656 TMEM78Q5T7P6 136 aa9□□□□□ -0.97
SKA1-203ENST00000417656 GFI1BQ5VTD9 330 aa9□□□□□ -0.97
SKA1-203ENST00000417656 C9orf47Q6ZRZ4 202 aa9□□□□□ -0.97
SKA1-203ENST00000417656 CMTM2Q8TAZ6 248 aa9□□□□□ -0.97
SKA1-203ENST00000417656 NEU1Q99519 415 aa9□□□□□ -0.97
SKA1-203ENST00000417656 TMPRSS5Q9H3S3 457 aa9□□□□□ -0.97
SKA1-203ENST00000417656 GGTLC3B5MD39 225 aa8.99□□□□□ -0.97
SKA1-203ENST00000417656 C3orf84H3BNL1 204 aa8.99□□□□□ -0.97
SKA1-203ENST00000417656 HBE1P02100 147 aa8.99□□□□□ -0.97
SKA1-203ENST00000417656 SLC25A5P05141 298 aaKnown RBP8.99□□□□□ -0.97
SKA1-203ENST00000417656 NKX2-5P52952 324 aaPredicted RBP8.99□□□□□ -0.97
SKA1-203ENST00000417656 UBE2G2P60604 165 aa8.99□□□□□ -0.97
SKA1-203ENST00000417656 PMS2P11Q13670 270 aa8.99□□□□□ -0.97
SKA1-203ENST00000417656 GOLT1AQ6ZVE7 132 aa8.99□□□□□ -0.97
SKA1-203ENST00000417656 RXFP4Q8TDU9 374 aa8.99□□□□□ -0.97
SKA1-203ENST00000417656 FAM19A4Q96LR4 140 aa8.99□□□□□ -0.97
SKA1-203ENST00000417656 LINC00477Q96M19 166 aa8.99□□□□□ -0.97
SKA1-203ENST00000417656 STARD9Q9P2P6 4700 aa8.98□□□□□ -0.97
SKA1-203ENST00000417656 LOC102723971A0A1B0GUV8 181 aa8.98□□□□□ -0.97
SKA1-203ENST00000417656 A0A1B0GV50 99 aa8.98□□□□□ -0.97
SKA1-203ENST00000417656 RBAKDNA6NC62 111 aa8.98□□□□□ -0.97
SKA1-203ENST00000417656 SMIM9A6NGZ8 99 aa8.98□□□□□ -0.97
SKA1-203ENST00000417656 ZNF705GA8MUZ8 300 aaPredicted RBP8.98□□□□□ -0.97
SKA1-203ENST00000417656 PRM2P04554 102 aa8.98□□□□□ -0.97
SKA1-203ENST00000417656 ZNF138P52744 262 aa8.98□□□□□ -0.97
SKA1-203ENST00000417656 BTN1A1Q13410 526 aa8.98□□□□□ -0.97
SKA1-203ENST00000417656 RRN3P1Q2M238 152 aa8.98□□□□□ -0.97
SKA1-203ENST00000417656 PRR9Q5T870 116 aa8.98□□□□□ -0.97
SKA1-203ENST00000417656 SLC51BQ86UW2 128 aa8.98□□□□□ -0.97
SKA1-203ENST00000417656 C5orf17Q8NAS9 161 aa8.98□□□□□ -0.97
SKA1-203ENST00000417656 ZNF492Q9P255 531 aa8.98□□□□□ -0.97
SKA1-203ENST00000417656 CELA1Q9UNI1 258 aa8.98□□□□□ -0.97
SKA1-203ENST00000417656 YTHDF2Q9Y5A9 579 aaKnown RBP8.98□□□□□ -0.97
SKA1-203ENST00000417656 TRAV12-3A0A0B4J271 114 aa8.97□□□□□ -0.97
SKA1-203ENST00000417656 C7orf71A4D174 169 aa8.97□□□□□ -0.97
SKA1-203ENST00000417656 CXorf65A6NEN9 183 aa8.97□□□□□ -0.97
SKA1-203ENST00000417656 KLLNB2CW77 178 aa8.97□□□□□ -0.97
SKA1-203ENST00000417656 CRISP2P16562 243 aa8.97□□□□□ -0.97
SKA1-203ENST00000417656 EMP1P54849 157 aa8.97□□□□□ -0.97
SKA1-203ENST00000417656 NANOS2P60321 138 aaKnown RBP8.97□□□□□ -0.97
SKA1-203ENST00000417656 CASC10Q5T4H9 136 aa8.97□□□□□ -0.97
SKA1-203ENST00000417656 DPPA3Q6W0C5 159 aa8.97□□□□□ -0.97
SKA1-203ENST00000417656 TMEM256Q8N2U0 113 aa8.97□□□□□ -0.97
SKA1-203ENST00000417656 ZFAND2AQ8N6M9 145 aa8.97□□□□□ -0.97
SKA1-203ENST00000417656 C11orf45Q8TAV5 145 aa8.97□□□□□ -0.97
SKA1-203ENST00000417656 SFT2D1Q8WV19 159 aa8.97□□□□□ -0.97
SKA1-203ENST00000417656 LINC01587Q99440 93 aa8.97□□□□□ -0.97
SKA1-203ENST00000417656 PGPEP1Q9NXJ5 209 aa8.97□□□□□ -0.97
SKA1-203ENST00000417656 TRAV8-1A0A0A6YYK1 113 aa8.96□□□□□ -0.98
SKA1-203ENST00000417656 A0A1W2PRE2 83 aa8.96□□□□□ -0.98
SKA1-203ENST00000417656 TCRAP04437 139 aa8.96□□□□□ -0.98
SKA1-203ENST00000417656 SUMO1P63165 101 aaKnown RBP8.96□□□□□ -0.98
SKA1-203ENST00000417656 EIF5AL1Q6IS14 154 aaKnown RBP8.96□□□□□ -0.98
SKA1-203ENST00000417656 MBD3L1Q8WWY6 194 aa8.96□□□□□ -0.98
SKA1-203ENST00000417656 C20orf144Q9BQM9 153 aa8.96□□□□□ -0.98
SKA1-203ENST00000417656 TMEM189A5PLL7 270 aa8.95□□□□□ -0.98
SKA1-203ENST00000417656 FAM74A7A6NL05 159 aa8.95□□□□□ -0.98
SKA1-203ENST00000417656 H7BYZ3 331 aa8.95□□□□□ -0.98
SKA1-203ENST00000417656 GPX1P07203 203 aa8.95□□□□□ -0.98
SKA1-203ENST00000417656 H2AFB1P0C5Y9 115 aa8.95□□□□□ -0.98
SKA1-203ENST00000417656 HTN1P15515 57 aa8.95□□□□□ -0.98
SKA1-203ENST00000417656 RNASE4P34096 147 aaKnown RBP8.95□□□□□ -0.98
SKA1-203ENST00000417656 TAS2R60P59551 318 aa8.95□□□□□ -0.98
SKA1-203ENST00000417656 ZNF767PQ75MW2 155 aa8.95□□□□□ -0.98
SKA1-203ENST00000417656 ARL6IP6Q8N6S5 226 aa8.95□□□□□ -0.98
SKA1-203ENST00000417656 SGK494Q96LW2 274 aa8.95□□□□□ -0.98
SKA1-203ENST00000417656 NIPSNAP3BQ9BS92 247 aa8.95□□□□□ -0.98
SKA1-203ENST00000417656 TRBV7-9A0A0J9YWB2 115 aa8.94□□□□□ -0.98
SKA1-203ENST00000417656 SERTM2A0A1B0GWG4 89 aa8.94□□□□□ -0.98
SKA1-203ENST00000417656 NMBP08949 121 aa8.94□□□□□ -0.98
SKA1-203ENST00000417656 AZU1P20160 251 aa8.94□□□□□ -0.98
SKA1-203ENST00000417656 SULT1A2P50226 295 aa8.94□□□□□ -0.98
SKA1-203ENST00000417656 CYB561D1Q8N8Q1 229 aa8.94□□□□□ -0.98
SKA1-203ENST00000417656 ATG101Q9BSB4 218 aa8.94□□□□□ -0.98
SKA1-203ENST00000417656 EPDR1Q9UM22 224 aa8.94□□□□□ -0.98
SKA1-203ENST00000417656 PLAC8L1A1L4L8 177 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms