RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 TCRAP04437 139 aa6.26□□□□□ -1.41
TRIM48-201ENST00000417545 NMBP08949 121 aa6.26□□□□□ -1.41
TRIM48-201ENST00000417545 FRMD6-AS1P0C7T7 363 aa6.26□□□□□ -1.41
TRIM48-201ENST00000417545 FXYD7P58549 80 aa6.26□□□□□ -1.41
TRIM48-201ENST00000417545 ERCC8Q13216 396 aa6.26□□□□□ -1.41
TRIM48-201ENST00000417545 GDF5OSQ5U4N7 250 aa6.26□□□□□ -1.41
TRIM48-201ENST00000417545 TRPT1Q86TN4 253 aaKnown RBP6.26□□□□□ -1.41
TRIM48-201ENST00000417545 ARL6IP6Q8N6S5 226 aa6.26□□□□□ -1.41
TRIM48-201ENST00000417545 LINC00477Q96M19 166 aa6.26□□□□□ -1.41
TRIM48-201ENST00000417545 TMEM208Q9BTX3 173 aa6.26□□□□□ -1.41
TRIM48-201ENST00000417545 KRTAP4-8Q9BYQ9 185 aa6.26□□□□□ -1.41
TRIM48-201ENST00000417545 C19orf73Q9NVV2 129 aa6.26□□□□□ -1.41
TRIM48-201ENST00000417545 NOTCH3Q9UM47 2321 aa6.26□□□□□ -1.41
TRIM48-201ENST00000417545 DNHD1Q96M86 4753 aa6.26□□□□□ -1.41
TRIM48-201ENST00000417545 LOC102723971A0A1B0GUV8 181 aa6.25□□□□□ -1.41
TRIM48-201ENST00000417545 NPIPB6E9PJ23 425 aa6.25□□□□□ -1.41
TRIM48-201ENST00000417545 INSP01308 110 aa6.25□□□□□ -1.41
TRIM48-201ENST00000417545 ZNF138P52744 262 aa6.25□□□□□ -1.41
TRIM48-201ENST00000417545 FLI1Q01543 452 aaPredicted RBP6.25□□□□□ -1.41
TRIM48-201ENST00000417545 IFITM2Q01629 132 aa6.25□□□□□ -1.41
TRIM48-201ENST00000417545 PEA15Q15121 130 aa6.25□□□□□ -1.41
TRIM48-201ENST00000417545 SPINK13Q1W4C9 94 aa6.25□□□□□ -1.41
TRIM48-201ENST00000417545 CLLU1Q5K131 121 aa6.25□□□□□ -1.41
TRIM48-201ENST00000417545 PRNTQ86SH4 94 aa6.25□□□□□ -1.41
TRIM48-201ENST00000417545 TMEM75Q8N9X5 138 aa6.25□□□□□ -1.41
TRIM48-201ENST00000417545 FMC1Q96HJ9 113 aa6.25□□□□□ -1.41
TRIM48-201ENST00000417545 SGK494Q96LW2 274 aa6.25□□□□□ -1.41
TRIM48-201ENST00000417545 CITED4Q96RK1 184 aa6.25□□□□□ -1.41
TRIM48-201ENST00000417545 CSTL1Q9H114 145 aa6.25□□□□□ -1.41
TRIM48-201ENST00000417545 MED9Q9NWA0 146 aa6.25□□□□□ -1.41
TRIM48-201ENST00000417545 KIR2DL5BA0A0G2JN68 375 aa6.25□□□□□ -1.41
TRIM48-201ENST00000417545 KIR2DL5BA0A0G2JPC4 375 aa6.25□□□□□ -1.41
TRIM48-201ENST00000417545 SCO2A0A1W2PP80 73 aa6.25□□□□□ -1.41
TRIM48-201ENST00000417545 RBMY1BA6NDE4 496 aaKnown RBP6.25□□□□□ -1.41
TRIM48-201ENST00000417545 RBMY1EA6NEQ0 496 aaKnown RBP6.25□□□□□ -1.41
TRIM48-201ENST00000417545 A8MZ25 164 aa6.25□□□□□ -1.41
TRIM48-201ENST00000417545 UBE2CO00762 179 aa6.25□□□□□ -1.41
TRIM48-201ENST00000417545 S100A9P06702 114 aaKnown RBP6.25□□□□□ -1.41
TRIM48-201ENST00000417545 GPX1P07203 203 aa6.25□□□□□ -1.41
TRIM48-201ENST00000417545 RBMY1DP0C7P1 496 aaKnown RBP6.25□□□□□ -1.41
TRIM48-201ENST00000417545 ZNF674Q2M3X9 581 aa6.25□□□□□ -1.41
TRIM48-201ENST00000417545 ZNF506Q5JVG8 444 aa6.25□□□□□ -1.41
TRIM48-201ENST00000417545 C9orf47Q6ZRZ4 202 aa6.25□□□□□ -1.41
TRIM48-201ENST00000417545 KIR2DL5AQ8N109 375 aa6.25□□□□□ -1.41
TRIM48-201ENST00000417545 KIR2DL5BQ8NHK3 375 aa6.25□□□□□ -1.41
TRIM48-201ENST00000417545 Q8TAT8 98 aa6.25□□□□□ -1.41
TRIM48-201ENST00000417545 VGLL1Q99990 258 aa6.25□□□□□ -1.41
TRIM48-201ENST00000417545 ZMAT4Q9H898 229 aa6.25□□□□□ -1.41
TRIM48-201ENST00000417545 TREM1Q9NP99 234 aa6.25□□□□□ -1.41
TRIM48-201ENST00000417545 GOLT1BQ9Y3E0 138 aa6.25□□□□□ -1.41
TRIM48-201ENST00000417545 IGHV3OR16-12A0A075B7B8 117 aa6.24□□□□□ -1.41
TRIM48-201ENST00000417545 TRAV8-1A0A0A6YYK1 113 aa6.24□□□□□ -1.41
TRIM48-201ENST00000417545 TRAV34A0A0B4J273 112 aa6.24□□□□□ -1.41
TRIM48-201ENST00000417545 M0R2Z0 102 aa6.24□□□□□ -1.41
TRIM48-201ENST00000417545 CT45A10P0DMU9 189 aa6.24□□□□□ -1.41
TRIM48-201ENST00000417545 CDKN1BP46527 198 aa6.24□□□□□ -1.41
TRIM48-201ENST00000417545 PMS2P11Q13670 270 aa6.24□□□□□ -1.41
TRIM48-201ENST00000417545 SAPCD1Q5SSQ6 148 aa6.24□□□□□ -1.41
TRIM48-201ENST00000417545 LYPD6BQ8NI32 183 aa6.24□□□□□ -1.41
TRIM48-201ENST00000417545 ODF3Q96PU9 254 aa6.24□□□□□ -1.41
TRIM48-201ENST00000417545 ASCL2Q99929 193 aa6.24□□□□□ -1.41
TRIM48-201ENST00000417545 RARRES2Q99969 163 aa6.24□□□□□ -1.41
TRIM48-201ENST00000417545 AGPAT4-IT1Q9H0P7 198 aa6.24□□□□□ -1.41
TRIM48-201ENST00000417545 SLC35B3Q9H1N7 401 aa6.24□□□□□ -1.41
TRIM48-201ENST00000417545 ZNF492Q9P255 531 aa6.24□□□□□ -1.41
TRIM48-201ENST00000417545 XCL2Q9UBD3 114 aa6.24□□□□□ -1.41
TRIM48-201ENST00000417545 PSG8Q9UQ74 426 aa6.24□□□□□ -1.41
TRIM48-201ENST00000417545 PKD1L1Q8TDX9 2849 aa6.23□□□□□ -1.41
TRIM48-201ENST00000417545 AGRNO00468 2067 aa6.23□□□□□ -1.41
TRIM48-201ENST00000417545 TRAV12-2A0A075B6T6 113 aa6.23□□□□□ -1.41
TRIM48-201ENST00000417545 RGS13O14921 159 aa6.23□□□□□ -1.41
TRIM48-201ENST00000417545 RNASE4P34096 147 aaKnown RBP6.23□□□□□ -1.41
TRIM48-201ENST00000417545 DEFB135Q30KP9 77 aa6.23□□□□□ -1.41
TRIM48-201ENST00000417545 Q86TA4 180 aa6.23□□□□□ -1.41
TRIM48-201ENST00000417545 CCDC28AQ8IWP9 274 aa6.23□□□□□ -1.41
TRIM48-201ENST00000417545 CLUHP3Q96NS8 147 aa6.23□□□□□ -1.41
TRIM48-201ENST00000417545 RCHY1Q96PM5 261 aa6.23□□□□□ -1.41
TRIM48-201ENST00000417545 NIPSNAP3BQ9BS92 247 aa6.23□□□□□ -1.41
TRIM48-201ENST00000417545 LENEPQ9Y5L5 61 aa6.23□□□□□ -1.41
TRIM48-201ENST00000417545 C7orf71A4D174 169 aa6.22□□□□□ -1.41
TRIM48-201ENST00000417545 TMEM250H0YL14 139 aa6.22□□□□□ -1.41
TRIM48-201ENST00000417545 MGST1P10620 155 aaKnown RBP6.22□□□□□ -1.41
TRIM48-201ENST00000417545 RPL35P42766 123 aaKnown RBP6.22□□□□□ -1.41
TRIM48-201ENST00000417545 GNG4P50150 75 aa6.22□□□□□ -1.41
TRIM48-201ENST00000417545 SMUG1Q53HV7 270 aa6.22□□□□□ -1.41
TRIM48-201ENST00000417545 C11orf52Q96A22 123 aa6.22□□□□□ -1.41
TRIM48-201ENST00000417545 IGF2BP2-AS1Q96M15 143 aa6.22□□□□□ -1.41
TRIM48-201ENST00000417545 LINC00479Q96M42 142 aa6.22□□□□□ -1.41
TRIM48-201ENST00000417545 SPATA25Q9BR10 227 aa6.22□□□□□ -1.41
TRIM48-201ENST00000417545 TRAV12-3A0A0B4J271 114 aa6.21□□□□□ -1.42
TRIM48-201ENST00000417545 TRBV7-9A0A0J9YWB2 115 aa6.21□□□□□ -1.42
TRIM48-201ENST00000417545 RAB19A4D1S5 217 aa6.21□□□□□ -1.42
TRIM48-201ENST00000417545 TAS2R60P59551 318 aa6.21□□□□□ -1.42
TRIM48-201ENST00000417545 TMEM183BQ1AE95 376 aa6.21□□□□□ -1.42
TRIM48-201ENST00000417545 CENPWQ5EE01 88 aa6.21□□□□□ -1.42
TRIM48-201ENST00000417545 AMTNQ6UX39 209 aa6.21□□□□□ -1.42
TRIM48-201ENST00000417545 COMMD7Q86VX2 200 aa6.21□□□□□ -1.42
TRIM48-201ENST00000417545 BAGE2Q86Y30 109 aa6.21□□□□□ -1.42
TRIM48-201ENST00000417545 LINC01587Q99440 93 aa6.21□□□□□ -1.42
TRIM48-201ENST00000417545 B9D2Q9BPU9 175 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms