RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 ZNF48Q96MX3 618 aaPredicted RBP11.23□□□□□ -0.61
HDAC9-208ENST00000417496 G3V318 75 aa11.23□□□□□ -0.61
HDAC9-208ENST00000417496 CACNG7P62955 275 aa11.23□□□□□ -0.61
HDAC9-208ENST00000417496 CCDC144NLQ6NUI1 221 aa11.23□□□□□ -0.61
HDAC9-208ENST00000417496 PRSS57Q6UWY2 283 aa11.23□□□□□ -0.61
HDAC9-208ENST00000417496 C2orf91Q6ZV80 131 aa11.23□□□□□ -0.61
HDAC9-208ENST00000417496 S100A7AQ86SG5 101 aa11.23□□□□□ -0.61
HDAC9-208ENST00000417496 U3KQK5 164 aa11.23□□□□□ -0.61
HDAC9-208ENST00000417496 ZNF207O43670 478 aaKnown RBP11.22□□□□□ -0.61
HDAC9-208ENST00000417496 NHLH1Q02575 133 aa11.22□□□□□ -0.61
HDAC9-208ENST00000417496 MS4A6AQ9H2W1 248 aa11.22□□□□□ -0.61
HDAC9-208ENST00000417496 IGHV2-70DA0A0C4DH43 119 aa11.22□□□□□ -0.61
HDAC9-208ENST00000417496 C21orf62-AS1Q17RA5 79 aa11.22□□□□□ -0.61
HDAC9-208ENST00000417496 C18orf15Q96N68 181 aa11.22□□□□□ -0.61
HDAC9-208ENST00000417496 ATP6V0E1O15342 81 aa11.21□□□□□ -0.61
HDAC9-208ENST00000417496 COX8AP10176 69 aa11.21□□□□□ -0.61
HDAC9-208ENST00000417496 DEFB125Q8N687 156 aa11.21□□□□□ -0.61
HDAC9-208ENST00000417496 OR4C5Q8NGB2 326 aa11.21□□□□□ -0.61
HDAC9-208ENST00000417496 SELENOKQ9Y6D0 94 aa11.21□□□□□ -0.61
HDAC9-208ENST00000417496 SFTPCP11686 197 aa11.2□□□□□ -0.62
HDAC9-208ENST00000417496 C12orf54Q6X4T0 127 aa11.2□□□□□ -0.62
HDAC9-208ENST00000417496 Q6ZQT7 251 aa11.2□□□□□ -0.62
HDAC9-208ENST00000417496 IL17RELQ6ZVW7 336 aa11.2□□□□□ -0.62
HDAC9-208ENST00000417496 GATA1P15976 413 aaPredicted RBP11.2□□□□□ -0.62
HDAC9-208ENST00000417496 EVI2AP22794 236 aa11.2□□□□□ -0.62
HDAC9-208ENST00000417496 EBI3Q14213 229 aa11.2□□□□□ -0.62
HDAC9-208ENST00000417496 AMMECR1LQ6DCA0 310 aa11.2□□□□□ -0.62
HDAC9-208ENST00000417496 CLEC19AQ6UXS0 136 aa11.2□□□□□ -0.62
HDAC9-208ENST00000417496 IGLC6P0CF74 106 aa11.19□□□□□ -0.62
HDAC9-208ENST00000417496 PAX8Q06710 450 aa11.19□□□□□ -0.62
HDAC9-208ENST00000417496 AJUBAQ96IF1 538 aa11.19□□□□□ -0.62
HDAC9-208ENST00000417496 BUB3O43684 328 aa11.19□□□□□ -0.62
HDAC9-208ENST00000417496 UQCRFS1P47985 274 aa11.19□□□□□ -0.62
HDAC9-208ENST00000417496 HIST1H1AQ02539 215 aaPredicted RBP11.19□□□□□ -0.62
HDAC9-208ENST00000417496 ZNF502Q8TBZ5 544 aa11.19□□□□□ -0.62
HDAC9-208ENST00000417496 SIRPDQ9H106 197 aa11.19□□□□□ -0.62
HDAC9-208ENST00000417496 BMI1P35226 326 aa11.18□□□□□ -0.62
HDAC9-208ENST00000417496 SAA4P35542 130 aa11.18□□□□□ -0.62
HDAC9-208ENST00000417496 COX8CQ7Z4L0 72 aa11.18□□□□□ -0.62
HDAC9-208ENST00000417496 RNF185Q96GF1 192 aa11.18□□□□□ -0.62
HDAC9-208ENST00000417496 DKK2Q9UBU2 259 aa11.18□□□□□ -0.62
HDAC9-208ENST00000417496 LINC00527Q9UJ94 153 aa11.18□□□□□ -0.62
HDAC9-208ENST00000417496 HBDP02042 147 aa11.18□□□□□ -0.62
HDAC9-208ENST00000417496 FGF6P10767 208 aa11.18□□□□□ -0.62
HDAC9-208ENST00000417496 C1orf122Q6ZSJ8 110 aa11.18□□□□□ -0.62
HDAC9-208ENST00000417496 ZFAND3Q9H8U3 227 aa11.18□□□□□ -0.62
HDAC9-208ENST00000417496 CLPSL1A2RUU4 121 aa11.17□□□□□ -0.62
HDAC9-208ENST00000417496 FABP5P3A8MUU1 101 aa11.17□□□□□ -0.62
HDAC9-208ENST00000417496 MINOS1Q5TGZ0 78 aa11.17□□□□□ -0.62
HDAC9-208ENST00000417496 IFI27L1Q96BM0 104 aa11.17□□□□□ -0.62
HDAC9-208ENST00000417496 CCDC140Q96MF4 163 aa11.17□□□□□ -0.62
HDAC9-208ENST00000417496 PSMG3-AS1Q96PY0 264 aa11.17□□□□□ -0.62
HDAC9-208ENST00000417496 PPP1R14DQ9NXH3 145 aa11.17□□□□□ -0.62
HDAC9-208ENST00000417496 C11orf21Q9P2W6 132 aa11.17□□□□□ -0.62
HDAC9-208ENST00000417496 MINOS1-NBL1R4GNA1 71 aa11.17□□□□□ -0.62
HDAC9-208ENST00000417496 IGHV3OR16-10A0A075B7F0 116 aa11.17□□□□□ -0.62
HDAC9-208ENST00000417496 TRAV8-6A0A0B4J262 113 aa11.17□□□□□ -0.62
HDAC9-208ENST00000417496 KLRB1Q12918 225 aa11.17□□□□□ -0.62
HDAC9-208ENST00000417496 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.17□□□□□ -0.62
HDAC9-208ENST00000417496 UBTD1Q9HAC8 227 aa11.17□□□□□ -0.62
HDAC9-208ENST00000417496 CBY1Q9Y3M2 126 aa11.17□□□□□ -0.62
HDAC9-208ENST00000417496 TMEM219Q86XT9 240 aa11.16□□□□□ -0.62
HDAC9-208ENST00000417496 TMEM190Q8WZ59 177 aa11.16□□□□□ -0.62
HDAC9-208ENST00000417496 RBX1P62877 108 aa11.16□□□□□ -0.62
HDAC9-208ENST00000417496 PCP2Q8IVA1 136 aa11.16□□□□□ -0.62
HDAC9-208ENST00000417496 NAA38Q9BRA0 125 aaKnown RBP11.16□□□□□ -0.62
HDAC9-208ENST00000417496 AGPAT4-IT1Q9H0P7 198 aa11.16□□□□□ -0.62
HDAC9-208ENST00000417496 SPG11Q96JI7 2443 aa11.16□□□□□ -0.62
HDAC9-208ENST00000417496 IGKV3D-20A0A0C4DH25 116 aa11.15□□□□□ -0.62
HDAC9-208ENST00000417496 OOSP1A8MZH6 123 aa11.15□□□□□ -0.62
HDAC9-208ENST00000417496 NMUP48645 174 aa11.15□□□□□ -0.62
HDAC9-208ENST00000417496 FAM110DQ8TAY7 271 aaPredicted RBP11.15□□□□□ -0.62
HDAC9-208ENST00000417496 BPESC1Q9GZL8 116 aa11.15□□□□□ -0.62
HDAC9-208ENST00000417496 SCGB2A1O75556 95 aa11.15□□□□□ -0.62
HDAC9-208ENST00000417496 RPS20P60866 119 aaKnown RBP11.15□□□□□ -0.62
HDAC9-208ENST00000417496 LGALS9BQ3B8N2 356 aa11.15□□□□□ -0.62
HDAC9-208ENST00000417496 TMEM97Q5BJF2 176 aa11.15□□□□□ -0.62
HDAC9-208ENST00000417496 LGALS9CQ6DKI2 356 aa11.15□□□□□ -0.62
HDAC9-208ENST00000417496 DTX2Q86UW9 622 aa11.15□□□□□ -0.62
HDAC9-208ENST00000417496 ITPR1Q14643 2758 aa11.15□□□□□ -0.62
HDAC9-208ENST00000417496 C7orf71A4D174 169 aa11.14□□□□□ -0.63
HDAC9-208ENST00000417496 CD5LO43866 347 aa11.14□□□□□ -0.63
HDAC9-208ENST00000417496 TRGV3P03979 118 aa11.14□□□□□ -0.63
HDAC9-208ENST00000417496 LEPP41159 167 aa11.14□□□□□ -0.63
HDAC9-208ENST00000417496 TTTY13Q9BZ97 58 aa11.14□□□□□ -0.63
HDAC9-208ENST00000417496 TRAV26-2A0A0B4J265 109 aa11.14□□□□□ -0.63
HDAC9-208ENST00000417496 SPRY2O43597 315 aa11.14□□□□□ -0.63
HDAC9-208ENST00000417496 TNFRSF6BO95407 300 aa11.14□□□□□ -0.63
HDAC9-208ENST00000417496 PCP4P48539 62 aa11.14□□□□□ -0.63
HDAC9-208ENST00000417496 UBE2E1P51965 193 aa11.14□□□□□ -0.63
HDAC9-208ENST00000417496 TRAV8-2A0A0B4J237 113 aa11.13□□□□□ -0.63
HDAC9-208ENST00000417496 J3KRW8 73 aa11.13□□□□□ -0.63
HDAC9-208ENST00000417496 GOSR1O95249 250 aa11.13□□□□□ -0.63
HDAC9-208ENST00000417496 RNF151Q2KHN1 245 aa11.13□□□□□ -0.63
HDAC9-208ENST00000417496 K7EP13 123 aa11.13□□□□□ -0.63
HDAC9-208ENST00000417496 MAP1LC3AQ9H492 121 aa11.13□□□□□ -0.63
HDAC9-208ENST00000417496 CELSR2Q9HCU4 2923 aa11.13□□□□□ -0.63
HDAC9-208ENST00000417496 LY6DQ14210 128 aa11.12□□□□□ -0.63
HDAC9-208ENST00000417496 BOD1L2Q8IYS8 172 aa11.12□□□□□ -0.63
HDAC9-208ENST00000417496 IGF1P05019 195 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms