RNA–Protein interactions for RNA: ENST00000415749.1

EPHA4-204, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-204ENST00000415749 SMIM3Q9BZL3 60 aa4.27□□□□□ -1.73
EPHA4-204ENST00000415749 TOLLIPQ9H0E2 274 aa4.27□□□□□ -1.73
EPHA4-204ENST00000415749 LYRM2Q9NU23 88 aaPredicted RBP4.27□□□□□ -1.73
EPHA4-204ENST00000415749 MPC1Q9Y5U8 109 aa4.27□□□□□ -1.73
EPHA4-204ENST00000415749 DSCAML1Q8TD84 2053 aa4.26□□□□□ -1.73
EPHA4-204ENST00000415749 MUC4Q99102 2169 aa4.26□□□□□ -1.73
EPHA4-204ENST00000415749 IGKV1D-17A0A075B6S4 117 aa4.26□□□□□ -1.73
EPHA4-204ENST00000415749 BORCS7-ASMTA0A0B4J1R7 106 aa4.26□□□□□ -1.73
EPHA4-204ENST00000415749 TRAV8-4A0A0B4J246 113 aa4.26□□□□□ -1.73
EPHA4-204ENST00000415749 FAM24AA6NFZ4 105 aa4.26□□□□□ -1.73
EPHA4-204ENST00000415749 C17orf98A8MV24 154 aa4.26□□□□□ -1.73
EPHA4-204ENST00000415749 KRTAP4-16G5E9R7 235 aaPredicted RBP4.26□□□□□ -1.73
EPHA4-204ENST00000415749 H0Y980 276 aa4.26□□□□□ -1.73
EPHA4-204ENST00000415749 J3QT63 122 aa4.26□□□□□ -1.73
EPHA4-204ENST00000415749 PGLYRP1O75594 196 aaPredicted RBP4.26□□□□□ -1.73
EPHA4-204ENST00000415749 IGKV1-39P01597 117 aa4.26□□□□□ -1.73
EPHA4-204ENST00000415749 P01737 135 aa4.26□□□□□ -1.73
EPHA4-204ENST00000415749 ORM1P02763 201 aa4.26□□□□□ -1.73
EPHA4-204ENST00000415749 IGKV1D-39P04432 117 aa4.26□□□□□ -1.73
EPHA4-204ENST00000415749 HSPB1P04792 205 aaKnown RBP4.26□□□□□ -1.73
EPHA4-204ENST00000415749 NFYBP25208 207 aa4.26□□□□□ -1.73
EPHA4-204ENST00000415749 BRS3P32247 399 aa4.26□□□□□ -1.73
EPHA4-204ENST00000415749 MEOX2P50222 304 aa4.26□□□□□ -1.73
EPHA4-204ENST00000415749 INSL3P51460 131 aa4.26□□□□□ -1.73
EPHA4-204ENST00000415749 GNG3P63215 75 aa4.26□□□□□ -1.73
EPHA4-204ENST00000415749 HLA-DRB3P79483 266 aa4.26□□□□□ -1.73
EPHA4-204ENST00000415749 EIF4EBP1Q13541 118 aaPredicted RBP4.26□□□□□ -1.73
EPHA4-204ENST00000415749 HMGN3Q15651 99 aa4.26□□□□□ -1.73
EPHA4-204ENST00000415749 MINOS1Q5TGZ0 78 aa4.26□□□□□ -1.73
EPHA4-204ENST00000415749 SMDT1Q9H4I9 107 aa4.26□□□□□ -1.73
EPHA4-204ENST00000415749 TUBA4BQ9H853 241 aa4.26□□□□□ -1.73
EPHA4-204ENST00000415749 HES4Q9HCC6 221 aa4.26□□□□□ -1.73
EPHA4-204ENST00000415749 MINOS1-NBL1R4GNA1 71 aa4.26□□□□□ -1.73
EPHA4-204ENST00000415749 IGHV3OR16-9A0A0B4J2B5 98 aa4.25□□□□□ -1.73
EPHA4-204ENST00000415749 M0QZK8 103 aa4.25□□□□□ -1.73
EPHA4-204ENST00000415749 DEGS1O15121 323 aa4.25□□□□□ -1.73
EPHA4-204ENST00000415749 MOSP00540 346 aa4.25□□□□□ -1.73
EPHA4-204ENST00000415749 P0C879 139 aa4.25□□□□□ -1.73
EPHA4-204ENST00000415749 IGHV1-8P0DP01 117 aa4.25□□□□□ -1.73
EPHA4-204ENST00000415749 ATP6V0CP27449 155 aa4.25□□□□□ -1.73
EPHA4-204ENST00000415749 DLX6P56179 175 aa4.25□□□□□ -1.73
EPHA4-204ENST00000415749 POLR2GP62487 172 aaKnown RBP eCLIP4.25□□□□□ -1.73
EPHA4-204ENST00000415749 PRSS8Q16651 343 aa4.25□□□□□ -1.73
EPHA4-204ENST00000415749 GUK1Q16774 197 aa4.25□□□□□ -1.73
EPHA4-204ENST00000415749 DEFB136Q30KP8 78 aa4.25□□□□□ -1.73
EPHA4-204ENST00000415749 RNF212Q495C1 297 aa4.25□□□□□ -1.73
EPHA4-204ENST00000415749 HAGHLQ6PII5 290 aaPredicted RBP4.25□□□□□ -1.73
EPHA4-204ENST00000415749 RXFP4Q8TDU9 374 aa4.25□□□□□ -1.73
EPHA4-204ENST00000415749 LSM10Q969L4 123 aaKnown RBP4.25□□□□□ -1.73
EPHA4-204ENST00000415749 GPR146Q96CH1 333 aa4.25□□□□□ -1.73
EPHA4-204ENST00000415749 SPIN2AQ99865 258 aa4.25□□□□□ -1.73
EPHA4-204ENST00000415749 SPIN2BQ9BPZ2 258 aa4.25□□□□□ -1.73
EPHA4-204ENST00000415749 SH3BGRL3Q9H299 93 aa4.25□□□□□ -1.73
EPHA4-204ENST00000415749 VAX2Q9UIW0 290 aa4.25□□□□□ -1.73
EPHA4-204ENST00000415749 LINC00527Q9UJ94 153 aa4.25□□□□□ -1.73
EPHA4-204ENST00000415749 PRELID1Q9Y255 219 aa4.25□□□□□ -1.73
EPHA4-204ENST00000415749 RFNGQ9Y644 331 aa4.25□□□□□ -1.73
EPHA4-204ENST00000415749 FRAS1Q86XX4 4008 aa4.25□□□□□ -1.73
EPHA4-204ENST00000415749 DNAH10Q8IVF4 4471 aa4.25□□□□□ -1.73
EPHA4-204ENST00000415749 ALMS1Q8TCU4 4167 aa4.24□□□□□ -1.73
EPHA4-204ENST00000415749 TNCP24821 2201 aa4.24□□□□□ -1.73
EPHA4-204ENST00000415749 SMIM26A0A096LP01 95 aa4.24□□□□□ -1.73
EPHA4-204ENST00000415749 TRAV1-1A0A0B4J248 108 aa4.24□□□□□ -1.73
EPHA4-204ENST00000415749 A0A0J9YXV3 536 aa4.24□□□□□ -1.73
EPHA4-204ENST00000415749 KRTAP16-1A8MUX0 517 aa4.24□□□□□ -1.73
EPHA4-204ENST00000415749 UMAD1C9J7I0 102 aa4.24□□□□□ -1.73
EPHA4-204ENST00000415749 CRXO43186 299 aaPredicted RBP4.24□□□□□ -1.73
EPHA4-204ENST00000415749 SRP19P09132 144 aaKnown RBP4.24□□□□□ -1.73
EPHA4-204ENST00000415749 PVALBP20472 110 aaPredicted RBP4.24□□□□□ -1.73
EPHA4-204ENST00000415749 HTR1DP28221 377 aa4.24□□□□□ -1.73
EPHA4-204ENST00000415749 PPP1CCP36873 323 aaKnown RBP4.24□□□□□ -1.73
EPHA4-204ENST00000415749 CCL20P78556 96 aa4.24□□□□□ -1.73
EPHA4-204ENST00000415749 BAXQ07812 192 aa4.24□□□□□ -1.73
EPHA4-204ENST00000415749 PEA15Q15121 130 aa4.24□□□□□ -1.73
EPHA4-204ENST00000415749 MSMO1Q15800 293 aa4.24□□□□□ -1.73
EPHA4-204ENST00000415749 ZNF429Q86V71 674 aa4.24□□□□□ -1.73
EPHA4-204ENST00000415749 ZNF561Q8N587 486 aa4.24□□□□□ -1.73
EPHA4-204ENST00000415749 DRAM1Q8N682 238 aa4.24□□□□□ -1.73
EPHA4-204ENST00000415749 CD177Q8N6Q3 437 aa4.24□□□□□ -1.73
EPHA4-204ENST00000415749 HIST1H2BAQ96A08 127 aa4.24□□□□□ -1.73
EPHA4-204ENST00000415749 FAM19A4Q96LR4 140 aa4.24□□□□□ -1.73
EPHA4-204ENST00000415749 RTL8AQ9BWD3 113 aa4.24□□□□□ -1.73
EPHA4-204ENST00000415749 SLC25A31Q9H0C2 315 aa4.24□□□□□ -1.73
EPHA4-204ENST00000415749 SMCO4Q9NRQ5 59 aa4.24□□□□□ -1.73
EPHA4-204ENST00000415749 COA4Q9NYJ1 87 aa4.24□□□□□ -1.73
EPHA4-204ENST00000415749 PIGBOS1A0A0B4J2F0 54 aa4.23□□□□□ -1.73
EPHA4-204ENST00000415749 C7orf77A4D0Y5 90 aa4.23□□□□□ -1.73
EPHA4-204ENST00000415749 TMEM210A6NLX4 147 aa4.23□□□□□ -1.73
EPHA4-204ENST00000415749 H0Y9J4 135 aa4.23□□□□□ -1.73
EPHA4-204ENST00000415749 SSSCA1O60232 199 aa4.23□□□□□ -1.73
EPHA4-204ENST00000415749 MMP23AO75900 390 aa4.23□□□□□ -1.73
EPHA4-204ENST00000415749 OR2H2O95918 312 aa4.23□□□□□ -1.73
EPHA4-204ENST00000415749 IGKV1-5P01602 117 aa4.23□□□□□ -1.73
EPHA4-204ENST00000415749 RBP4P02753 201 aa4.23□□□□□ -1.73
EPHA4-204ENST00000415749 CNTFRP26992 372 aa4.23□□□□□ -1.73
EPHA4-204ENST00000415749 TAS2R30P59541 319 aa4.23□□□□□ -1.73
EPHA4-204ENST00000415749 KIAA2026Q5HYC2 2103 aa4.23□□□□□ -1.73
EPHA4-204ENST00000415749 SPIN3Q5JUX0 258 aa4.23□□□□□ -1.73
EPHA4-204ENST00000415749 DPPA3Q6W0C5 159 aa4.23□□□□□ -1.73
EPHA4-204ENST00000415749 GTSCR1Q86UQ5 136 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms