RNA–Protein interactions for RNA: ENST00000414411.3

DDB1-202, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,904 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-202ENST00000414411 NUDT11Q96G61 164 aa7.65□□□□□ -1.18
DDB1-202ENST00000414411 UBE2E2Q96LR5 201 aa7.65□□□□□ -1.18
DDB1-202ENST00000414411 GPR82Q96P67 336 aa7.65□□□□□ -1.18
DDB1-202ENST00000414411 MRPL27Q9P0M9 148 aaKnown RBP7.65□□□□□ -1.18
DDB1-202ENST00000414411 A0A0G2JLM5 398 aa7.64□□□□□ -1.19
DDB1-202ENST00000414411 ADARB2-AS1A8MUL3 147 aa7.64□□□□□ -1.19
DDB1-202ENST00000414411 H3BTX0 84 aa7.64□□□□□ -1.19
DDB1-202ENST00000414411 SERF1AO75920 110 aa7.64□□□□□ -1.19
DDB1-202ENST00000414411 TOMM40O96008 361 aa7.64□□□□□ -1.19
DDB1-202ENST00000414411 TCRAP04437 139 aa7.64□□□□□ -1.19
DDB1-202ENST00000414411 HIST1H1EP10412 219 aaKnown RBP7.64□□□□□ -1.19
DDB1-202ENST00000414411 ATP5G2Q06055 141 aa7.64□□□□□ -1.19
DDB1-202ENST00000414411 IQCJQ1A5X6 159 aa7.64□□□□□ -1.19
DDB1-202ENST00000414411 PRR27Q6MZM9 219 aa7.64□□□□□ -1.19
DDB1-202ENST00000414411 MRPL54Q6P161 138 aaKnown RBP7.64□□□□□ -1.19
DDB1-202ENST00000414411 RBPMS2Q6ZRY4 209 aaKnown RBP7.64□□□□□ -1.19
DDB1-202ENST00000414411 GRAMD2BQ96HH9 432 aa7.64□□□□□ -1.19
DDB1-202ENST00000414411 FMC1Q96HJ9 113 aa7.64□□□□□ -1.19
DDB1-202ENST00000414411 CHRDL1Q9BU40 450 aa7.64□□□□□ -1.19
DDB1-202ENST00000414411 MLST8Q9BVC4 326 aa7.64□□□□□ -1.19
DDB1-202ENST00000414411 RPH3ALQ9UNE2 315 aa7.64□□□□□ -1.19
DDB1-202ENST00000414411 TRRAPQ9Y4A5 3859 aa7.64□□□□□ -1.19
DDB1-202ENST00000414411 F2Z2F3 143 aa7.64□□□□□ -1.19
DDB1-202ENST00000414411 F8W735 103 aaPredicted RBP7.64□□□□□ -1.19
DDB1-202ENST00000414411 LTAP01374 205 aa7.64□□□□□ -1.19
DDB1-202ENST00000414411 DDTP30046 118 aa7.64□□□□□ -1.19
DDB1-202ENST00000414411 FCGR2BP31994 310 aaPredicted RBP7.64□□□□□ -1.19
DDB1-202ENST00000414411 RIPPLY3P57055 190 aa7.64□□□□□ -1.19
DDB1-202ENST00000414411 RAB4BP61018 213 aa7.64□□□□□ -1.19
DDB1-202ENST00000414411 USF2Q15853 346 aaPredicted RBP7.64□□□□□ -1.19
DDB1-202ENST00000414411 HIST2H2BDQ6DRA6 164 aa7.64□□□□□ -1.19
DDB1-202ENST00000414411 RASL11AQ6T310 242 aa7.64□□□□□ -1.19
DDB1-202ENST00000414411 C11orf44Q8N8P7 122 aa7.64□□□□□ -1.19
DDB1-202ENST00000414411 ZNF502Q8TBZ5 544 aa7.64□□□□□ -1.19
DDB1-202ENST00000414411 SGK494Q96LW2 274 aa7.64□□□□□ -1.19
DDB1-202ENST00000414411 CITED1Q99966 193 aa7.64□□□□□ -1.19
DDB1-202ENST00000414411 SHANK2-AS3Q9BTD1 123 aa7.64□□□□□ -1.19
DDB1-202ENST00000414411 PRO1933Q9H354 126 aa7.64□□□□□ -1.19
DDB1-202ENST00000414411 OTORQ9NRC9 128 aa7.64□□□□□ -1.19
DDB1-202ENST00000414411 ZNF586Q9NXT0 402 aa7.64□□□□□ -1.19
DDB1-202ENST00000414411 WNK1Q9H4A3 2382 aa7.63□□□□□ -1.19
DDB1-202ENST00000414411 H3BRN7 92 aa7.63□□□□□ -1.19
DDB1-202ENST00000414411 PAFAH1B2P68402 229 aa7.63□□□□□ -1.19
DDB1-202ENST00000414411 DEFA6Q01524 100 aa7.63□□□□□ -1.19
DDB1-202ENST00000414411 BAGE3Q86Y29 109 aa7.63□□□□□ -1.19
DDB1-202ENST00000414411 TSKUQ8WUA8 353 aa7.63□□□□□ -1.19
DDB1-202ENST00000414411 GNB4Q9HAV0 340 aa7.63□□□□□ -1.19
DDB1-202ENST00000414411 S4R3C0 116 aa7.63□□□□□ -1.19
DDB1-202ENST00000414411 ANK2Q01484 3957 aa7.63□□□□□ -1.19
DDB1-202ENST00000414411 TRBV7-1A0A0A6YYK4 115 aa7.62□□□□□ -1.19
DDB1-202ENST00000414411 BMPR1BO00238 502 aa7.62□□□□□ -1.19
DDB1-202ENST00000414411 IGHV3-11P01762 117 aa7.62□□□□□ -1.19
DDB1-202ENST00000414411 OR10J3Q5JRS4 329 aa7.62□□□□□ -1.19
DDB1-202ENST00000414411 C18orf65Q6ZTR6 163 aa7.62□□□□□ -1.19
DDB1-202ENST00000414411 ZNF664Q8N3J9 261 aa7.62□□□□□ -1.19
DDB1-202ENST00000414411 NUP35Q8NFH5 326 aa7.62□□□□□ -1.19
DDB1-202ENST00000414411 TMEM190Q8WZ59 177 aa7.62□□□□□ -1.19
DDB1-202ENST00000414411 ZNF331Q9NQX6 463 aaPredicted RBP7.62□□□□□ -1.19
DDB1-202ENST00000414411 C21orf62Q9NYP8 219 aa7.62□□□□□ -1.19
DDB1-202ENST00000414411 TSSC4Q9Y5U2 329 aaPredicted RBP7.62□□□□□ -1.19
DDB1-202ENST00000414411 TRAV30A0A087WSZ9 112 aa7.62□□□□□ -1.19
DDB1-202ENST00000414411 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.62□□□□□ -1.19
DDB1-202ENST00000414411 HIGD1CA8MV81 97 aa7.62□□□□□ -1.19
DDB1-202ENST00000414411 IGHV3-23P01764 117 aa7.62□□□□□ -1.19
DDB1-202ENST00000414411 IL4P05112 153 aa7.62□□□□□ -1.19
DDB1-202ENST00000414411 IGLC2P0DOY2 106 aa7.62□□□□□ -1.19
DDB1-202ENST00000414411 MFAP4P55083 255 aa7.62□□□□□ -1.19
DDB1-202ENST00000414411 KIAA1644Q3SXP7 199 aa7.62□□□□□ -1.19
DDB1-202ENST00000414411 KHDC1LQ5JSQ8 128 aa7.62□□□□□ -1.19
DDB1-202ENST00000414411 Q86TA4 180 aa7.62□□□□□ -1.19
DDB1-202ENST00000414411 BPIFA4PQ86YQ2 179 aa7.62□□□□□ -1.19
DDB1-202ENST00000414411 RNASE8Q8TDE3 154 aaKnown RBP7.62□□□□□ -1.19
DDB1-202ENST00000414411 EEF1AKMT3Q96AZ1 226 aa7.62□□□□□ -1.19
DDB1-202ENST00000414411 ZNF747Q9BV97 191 aa7.62□□□□□ -1.19
DDB1-202ENST00000414411 RPP21Q9H633 154 aaKnown RBP7.62□□□□□ -1.19
DDB1-202ENST00000414411 ZNF492Q9P255 531 aa7.62□□□□□ -1.19
DDB1-202ENST00000414411 PKD1L1Q8TDX9 2849 aa7.61□□□□□ -1.19
DDB1-202ENST00000414411 TRBV19A0A075B6N1 114 aa7.61□□□□□ -1.19
DDB1-202ENST00000414411 WI2-2373I1.2A0A1W2PRP0 233 aa7.61□□□□□ -1.19
DDB1-202ENST00000414411 C19orf71A6NCJ1 209 aa7.61□□□□□ -1.19
DDB1-202ENST00000414411 GNG7O60262 68 aa7.61□□□□□ -1.19
DDB1-202ENST00000414411 APCSP02743 223 aa7.61□□□□□ -1.19
DDB1-202ENST00000414411 CTSGP08311 255 aa7.61□□□□□ -1.19
DDB1-202ENST00000414411 LGALS1P09382 135 aaKnown RBP7.61□□□□□ -1.19
DDB1-202ENST00000414411 SRIP30626 198 aa7.61□□□□□ -1.19
DDB1-202ENST00000414411 SLAQ13239 276 aa7.61□□□□□ -1.19
DDB1-202ENST00000414411 LINC00322Q6ZN03 302 aaPredicted RBP7.61□□□□□ -1.19
DDB1-202ENST00000414411 Q6ZWC4 215 aa7.61□□□□□ -1.19
DDB1-202ENST00000414411 EXOC3-AS1Q8N2X6 119 aa7.61□□□□□ -1.19
DDB1-202ENST00000414411 OR4F17Q8NGA8 305 aa7.61□□□□□ -1.19
DDB1-202ENST00000414411 C4orf3Q8WVX3 66 aa7.61□□□□□ -1.19
DDB1-202ENST00000414411 C14orf144Q96I85 54 aa7.61□□□□□ -1.19
DDB1-202ENST00000414411 RAX2Q96IS3 184 aa7.61□□□□□ -1.19
DDB1-202ENST00000414411 NAGKQ9UJ70 344 aa7.61□□□□□ -1.19
DDB1-202ENST00000414411 TRAV8-1A0A0A6YYK1 113 aa7.6□□□□□ -1.19
DDB1-202ENST00000414411 IGLV2-11P01706 119 aa7.6□□□□□ -1.19
DDB1-202ENST00000414411 TRBV12-3P01733 135 aa7.6□□□□□ -1.19
DDB1-202ENST00000414411 CLEC19AQ6UXS0 136 aa7.6□□□□□ -1.19
DDB1-202ENST00000414411 C8orf86Q6ZUL3 223 aa7.6□□□□□ -1.19
DDB1-202ENST00000414411 ATP5L2Q7Z4Y8 100 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms