RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 TRGV9Q99603 122 aa6.83□□□□□ -1.32
SYNE1-211ENST00000413186 AURKAIP1Q9NWT8 199 aaPredicted RBP6.83□□□□□ -1.32
SYNE1-211ENST00000413186 FASNP49327 2511 aaKnown RBP6.82□□□□□ -1.32
SYNE1-211ENST00000413186 TRBV20-1A0A075B6N2 111 aa6.82□□□□□ -1.32
SYNE1-211ENST00000413186 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.82□□□□□ -1.32
SYNE1-211ENST00000413186 INS-IGF2F8WCM5 200 aa6.82□□□□□ -1.32
SYNE1-211ENST00000413186 TOMM40O96008 361 aa6.82□□□□□ -1.32
SYNE1-211ENST00000413186 INSP01308 110 aa6.82□□□□□ -1.32
SYNE1-211ENST00000413186 NBEAP1P0C6P0 100 aa6.82□□□□□ -1.32
SYNE1-211ENST00000413186 ASIPP42127 132 aa6.82□□□□□ -1.32
SYNE1-211ENST00000413186 GATD1Q8NB37 220 aa6.82□□□□□ -1.32
SYNE1-211ENST00000413186 ST6GALNAC6Q969X2 333 aa6.82□□□□□ -1.32
SYNE1-211ENST00000413186 ATP6V0E1O15342 81 aa6.82□□□□□ -1.32
SYNE1-211ENST00000413186 CGB3P0DN86 165 aa6.82□□□□□ -1.32
SYNE1-211ENST00000413186 CGB7P0DN87 165 aa6.82□□□□□ -1.32
SYNE1-211ENST00000413186 SEC61GP60059 68 aa6.82□□□□□ -1.32
SYNE1-211ENST00000413186 HAMPP81172 84 aa6.82□□□□□ -1.32
SYNE1-211ENST00000413186 JPT2Q9H910 190 aa6.82□□□□□ -1.32
SYNE1-211ENST00000413186 TSPOP30536 169 aa6.82□□□□□ -1.32
SYNE1-211ENST00000413186 CRIP3Q6Q6R5 217 aa6.82□□□□□ -1.32
SYNE1-211ENST00000413186 ATRAIDQ6UW56 229 aa6.82□□□□□ -1.32
SYNE1-211ENST00000413186 TREML4Q6UXN2 200 aa6.82□□□□□ -1.32
SYNE1-211ENST00000413186 A0A1W2PRX2 142 aa6.81□□□□□ -1.32
SYNE1-211ENST00000413186 IGKV1-39P01597 117 aa6.81□□□□□ -1.32
SYNE1-211ENST00000413186 IGKV1D-39P04432 117 aa6.81□□□□□ -1.32
SYNE1-211ENST00000413186 CRYBB3P26998 211 aa6.81□□□□□ -1.32
SYNE1-211ENST00000413186 SYNJ2BPP57105 145 aa6.81□□□□□ -1.32
SYNE1-211ENST00000413186 CCL20P78556 96 aa6.81□□□□□ -1.32
SYNE1-211ENST00000413186 DOCK11Q5JSL3 2073 aa6.81□□□□□ -1.32
SYNE1-211ENST00000413186 A0A0U1RRA0 63 aa6.81□□□□□ -1.32
SYNE1-211ENST00000413186 C15orf62A8K5M9 175 aa6.81□□□□□ -1.32
SYNE1-211ENST00000413186 NDUFS5O43920 106 aa6.81□□□□□ -1.32
SYNE1-211ENST00000413186 DIAPH2-AS1Q14236 149 aa6.81□□□□□ -1.32
SYNE1-211ENST00000413186 CHCHD1Q96BP2 118 aaKnown RBP6.81□□□□□ -1.32
SYNE1-211ENST00000413186 IGHV4-38-2P0DP08 117 aa6.81□□□□□ -1.32
SYNE1-211ENST00000413186 C1QL4Q86Z23 238 aa6.81□□□□□ -1.32
SYNE1-211ENST00000413186 Q8N7P7 452 aa6.81□□□□□ -1.32
SYNE1-211ENST00000413186 ATP6V0BQ99437 205 aa6.81□□□□□ -1.32
SYNE1-211ENST00000413186 IL36BQ9NZH7 164 aa6.81□□□□□ -1.32
SYNE1-211ENST00000413186 LY96Q9Y6Y9 160 aa6.81□□□□□ -1.32
SYNE1-211ENST00000413186 ZNF292O60281 2723 aa6.81□□□□□ -1.32
SYNE1-211ENST00000413186 NPIPB5A8MRT5 1133 aa6.81□□□□□ -1.32
SYNE1-211ENST00000413186 AMY1AP04745 511 aa6.81□□□□□ -1.32
SYNE1-211ENST00000413186 EGR2P11161 476 aaPredicted RBP6.81□□□□□ -1.32
SYNE1-211ENST00000413186 HOXA5P20719 270 aa6.81□□□□□ -1.32
SYNE1-211ENST00000413186 HIST1H1AQ02539 215 aaPredicted RBP6.81□□□□□ -1.32
SYNE1-211ENST00000413186 HAPLN4Q86UW8 402 aa6.81□□□□□ -1.32
SYNE1-211ENST00000413186 PIP4P2Q8N4L2 257 aa6.81□□□□□ -1.32
SYNE1-211ENST00000413186 SLC50A1Q9BRV3 221 aa6.81□□□□□ -1.32
SYNE1-211ENST00000413186 F8P00451 2351 aa6.8□□□□□ -1.32
SYNE1-211ENST00000413186 IGHV3OR16-12A0A075B7B8 117 aa6.8□□□□□ -1.32
SYNE1-211ENST00000413186 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.8□□□□□ -1.32
SYNE1-211ENST00000413186 H3BUA1 57 aa6.8□□□□□ -1.32
SYNE1-211ENST00000413186 KLF17Q5JT82 389 aaPredicted RBP6.8□□□□□ -1.32
SYNE1-211ENST00000413186 PAPPA-AS1Q5QFB9 102 aa6.8□□□□□ -1.32
SYNE1-211ENST00000413186 SPANXB1Q9NS25 103 aaPredicted RBP6.8□□□□□ -1.32
SYNE1-211ENST00000413186 TRBV24-1A0A075B6N3 115 aa6.8□□□□□ -1.32
SYNE1-211ENST00000413186 HBDP02042 147 aa6.8□□□□□ -1.32
SYNE1-211ENST00000413186 ELANEP08246 267 aa6.8□□□□□ -1.32
SYNE1-211ENST00000413186 CMC4P56277 68 aaPredicted RBP6.8□□□□□ -1.32
SYNE1-211ENST00000413186 RPL23P62829 140 aaKnown RBP6.8□□□□□ -1.32
SYNE1-211ENST00000413186 FAM120AOSQ5T036 256 aa6.8□□□□□ -1.32
SYNE1-211ENST00000413186 LINC00518Q8N0U6 118 aa6.8□□□□□ -1.32
SYNE1-211ENST00000413186 CENPWQ5EE01 88 aa6.8□□□□□ -1.32
SYNE1-211ENST00000413186 ZNF329Q86UD4 541 aa6.8□□□□□ -1.32
SYNE1-211ENST00000413186 FMC1Q96HJ9 113 aa6.8□□□□□ -1.32
SYNE1-211ENST00000413186 IGHV3OR16-13A0A075B7E8 117 aa6.79□□□□□ -1.32
SYNE1-211ENST00000413186 IGHV3-74A0A0B4J1X5 117 aa6.79□□□□□ -1.32
SYNE1-211ENST00000413186 SRRM4A7MD48 611 aaKnown RBP6.79□□□□□ -1.32
SYNE1-211ENST00000413186 IGHV4-59P01825 116 aa6.79□□□□□ -1.32
SYNE1-211ENST00000413186 SRSF3P84103 164 aaKnown RBP6.79□□□□□ -1.32
SYNE1-211ENST00000413186 NPBQ8NG41 125 aa6.79□□□□□ -1.32
SYNE1-211ENST00000413186 MBD6Q96DN6 1003 aa6.79□□□□□ -1.32
SYNE1-211ENST00000413186 GATA2P23769 480 aaPredicted RBP6.79□□□□□ -1.32
SYNE1-211ENST00000413186 NUTF2P61970 127 aaKnown RBP6.79□□□□□ -1.32
SYNE1-211ENST00000413186 Q6AWC8 147 aa6.79□□□□□ -1.32
SYNE1-211ENST00000413186 RPP25LQ8N5L8 163 aaKnown RBP6.79□□□□□ -1.32
SYNE1-211ENST00000413186 IGHV3-49A0A0A0MS15 119 aa6.79□□□□□ -1.32
SYNE1-211ENST00000413186 LOC105371267A0A1B0GV96 52 aa6.79□□□□□ -1.32
SYNE1-211ENST00000413186 NDUFC2-KCTD14E9PQ53 114 aa6.79□□□□□ -1.32
SYNE1-211ENST00000413186 PEX7O00628 323 aa6.79□□□□□ -1.32
SYNE1-211ENST00000413186 MORN3Q6PF18 240 aaPredicted RBP6.79□□□□□ -1.32
SYNE1-211ENST00000413186 TMEM86BQ8N661 226 aa6.79□□□□□ -1.32
SYNE1-211ENST00000413186 OSTCQ9NRP0 149 aa6.79□□□□□ -1.32
SYNE1-211ENST00000413186 CSMD1Q96PZ7 3565 aa6.79□□□□□ -1.32
SYNE1-211ENST00000413186 A0A1B0GUS0 222 aa6.79□□□□□ -1.32
SYNE1-211ENST00000413186 C9JCJ5 164 aa6.79□□□□□ -1.32
SYNE1-211ENST00000413186 TNFRSF13BO14836 293 aaPredicted RBP6.79□□□□□ -1.32
SYNE1-211ENST00000413186 SLAQ13239 276 aa6.79□□□□□ -1.32
SYNE1-211ENST00000413186 ANXA2RQ3ZCQ2 193 aa6.79□□□□□ -1.32
SYNE1-211ENST00000413186 IL17RELQ6ZVW7 336 aa6.79□□□□□ -1.32
SYNE1-211ENST00000413186 PRNTQ86SH4 94 aa6.79□□□□□ -1.32
SYNE1-211ENST00000413186 C11orf44Q8N8P7 122 aa6.79□□□□□ -1.32
SYNE1-211ENST00000413186 DDB2Q92466 427 aa6.79□□□□□ -1.32
SYNE1-211ENST00000413186 DMRT1Q9Y5R6 373 aa6.79□□□□□ -1.32
SYNE1-211ENST00000413186 PCSK5Q92824 1860 aa6.78□□□□□ -1.32
SYNE1-211ENST00000413186 GOLT1AQ6ZVE7 132 aa6.78□□□□□ -1.32
SYNE1-211ENST00000413186 KLHL30-AS1Q8NEE0 82 aa6.78□□□□□ -1.32
SYNE1-211ENST00000413186 ZNF479Q96JC4 524 aa6.78□□□□□ -1.32
SYNE1-211ENST00000413186 SNRPCP09234 159 aaKnown RBP6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms