RNA–Protein interactions for RNA: ENST00000412615.6

TRAFD1-202, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRAFD1, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-202ENST00000412615 IGLC6P0CF74 106 aa8.86□□□□□ -0.99
TRAFD1-202ENST00000412615 CRIP2P52943 208 aaPredicted RBP8.86□□□□□ -0.99
TRAFD1-202ENST00000412615 ORMDL3Q8N138 153 aa8.86□□□□□ -0.99
TRAFD1-202ENST00000412615 PIFOQ8TCI5 191 aa8.86□□□□□ -0.99
TRAFD1-202ENST00000412615 C10orf105Q8TEF2 133 aa8.86□□□□□ -0.99
TRAFD1-202ENST00000412615 TRAV40A0A0B4J280 105 aa8.85□□□□□ -0.99
TRAFD1-202ENST00000412615 D6R8Y8 96 aa8.85□□□□□ -0.99
TRAFD1-202ENST00000412615 ERCC8Q13216 396 aa8.85□□□□□ -0.99
TRAFD1-202ENST00000412615 TWIST1Q15672 202 aa8.85□□□□□ -0.99
TRAFD1-202ENST00000412615 C19orf54Q5BKX5 351 aa8.85□□□□□ -0.99
TRAFD1-202ENST00000412615 COL5A1-AS1Q5SY13 56 aa8.85□□□□□ -0.99
TRAFD1-202ENST00000412615 BRD3OSQ6XYD6 125 aa8.85□□□□□ -0.99
TRAFD1-202ENST00000412615 AMN1Q8IY45 258 aa8.85□□□□□ -0.99
TRAFD1-202ENST00000412615 OR10AG1Q8NH19 301 aa8.85□□□□□ -0.99
TRAFD1-202ENST00000412615 MRPL53Q96EL3 112 aaKnown RBP8.85□□□□□ -0.99
TRAFD1-202ENST00000412615 PRELID3AQ96N28 172 aa8.85□□□□□ -0.99
TRAFD1-202ENST00000412615 MRPS16Q9Y3D3 137 aaKnown RBP8.85□□□□□ -0.99
TRAFD1-202ENST00000412615 U3KQE9 123 aa8.85□□□□□ -0.99
TRAFD1-202ENST00000412615 NCOR2Q9Y618 2525 aa8.85□□□□□ -0.99
TRAFD1-202ENST00000412615 TSPOP30536 169 aa8.85□□□□□ -0.99
TRAFD1-202ENST00000412615 RNF182Q8N6D2 247 aa8.85□□□□□ -0.99
TRAFD1-202ENST00000412615 LAMTOR2Q9Y2Q5 125 aa8.85□□□□□ -0.99
TRAFD1-202ENST00000412615 CHD8Q9HCK8 2581 aa8.84□□□□□ -0.99
TRAFD1-202ENST00000412615 IGHV3OR16-13A0A075B7E8 117 aa8.84□□□□□ -0.99
TRAFD1-202ENST00000412615 IGHV3-74A0A0B4J1X5 117 aa8.84□□□□□ -0.99
TRAFD1-202ENST00000412615 TRGV3P03979 118 aa8.84□□□□□ -0.99
TRAFD1-202ENST00000412615 ST20Q9HBF5 79 aa8.84□□□□□ -0.99
TRAFD1-202ENST00000412615 ZNF207O43670 478 aaKnown RBP8.84□□□□□ -0.99
TRAFD1-202ENST00000412615 IFI27P40305 119 aaPredicted RBP8.84□□□□□ -0.99
TRAFD1-202ENST00000412615 MRPL51Q4U2R6 128 aaKnown RBP8.84□□□□□ -0.99
TRAFD1-202ENST00000412615 HIF1ANQ9NWT6 349 aa8.84□□□□□ -0.99
TRAFD1-202ENST00000412615 LINC00527Q9UJ94 153 aa8.84□□□□□ -0.99
TRAFD1-202ENST00000412615 IGHV3-49A0A0A0MS15 119 aa8.83□□□□□ -1
TRAFD1-202ENST00000412615 MUC21A0A0G2JKD1 596 aa8.83□□□□□ -1
TRAFD1-202ENST00000412615 MUC21A0A140T8X8 626 aa8.83□□□□□ -1
TRAFD1-202ENST00000412615 LINC01559Q495D7 138 aa8.83□□□□□ -1
TRAFD1-202ENST00000412615 MUC21Q5SSG8 566 aa8.83□□□□□ -1
TRAFD1-202ENST00000412615 C8orf86Q6ZUL3 223 aa8.83□□□□□ -1
TRAFD1-202ENST00000412615 TIMM8BQ9Y5J9 83 aaPredicted RBP8.83□□□□□ -1
TRAFD1-202ENST00000412615 TRAV8-2A0A0B4J237 113 aa8.83□□□□□ -1
TRAFD1-202ENST00000412615 HSBP1L1C9JCN9 74 aa8.83□□□□□ -1
TRAFD1-202ENST00000412615 IGF1P05019 195 aa8.83□□□□□ -1
TRAFD1-202ENST00000412615 ZNF25P17030 456 aaPredicted RBP8.83□□□□□ -1
TRAFD1-202ENST00000412615 CKS2P33552 79 aa8.83□□□□□ -1
TRAFD1-202ENST00000412615 ATP5J2P56134 94 aa8.83□□□□□ -1
TRAFD1-202ENST00000412615 TMEM78Q5T7P6 136 aa8.83□□□□□ -1
TRAFD1-202ENST00000412615 IL17RELQ6ZVW7 336 aa8.83□□□□□ -1
TRAFD1-202ENST00000412615 ZNF575Q86XF7 245 aa8.83□□□□□ -1
TRAFD1-202ENST00000412615 ZNF747Q9BV97 191 aa8.83□□□□□ -1
TRAFD1-202ENST00000412615 CNFNQ9BYD5 112 aa8.83□□□□□ -1
TRAFD1-202ENST00000412615 AGPAT4-IT1Q9H0P7 198 aa8.83□□□□□ -1
TRAFD1-202ENST00000412615 SIGLEC8Q9NYZ4 499 aa8.83□□□□□ -1
TRAFD1-202ENST00000412615 CSMD1Q96PZ7 3565 aa8.83□□□□□ -1
TRAFD1-202ENST00000412615 LOC389332A0A1B0GUA5 103 aa8.82□□□□□ -1
TRAFD1-202ENST00000412615 J3KRW8 73 aa8.82□□□□□ -1
TRAFD1-202ENST00000412615 ARL3P36405 182 aa8.82□□□□□ -1
TRAFD1-202ENST00000412615 HIST1H1AQ02539 215 aaPredicted RBP8.82□□□□□ -1
TRAFD1-202ENST00000412615 BRI3O95415 125 aa8.82□□□□□ -1
TRAFD1-202ENST00000412615 IGHV4-38-2P0DP08 117 aa8.82□□□□□ -1
TRAFD1-202ENST00000412615 G0S2P27469 103 aa8.82□□□□□ -1
TRAFD1-202ENST00000412615 H3BUA1 57 aa8.81□□□□□ -1
TRAFD1-202ENST00000412615 LINC01545Q5VT33 79 aa8.81□□□□□ -1
TRAFD1-202ENST00000412615 ITPR1Q14643 2758 aa8.81□□□□□ -1
TRAFD1-202ENST00000412615 hDV102S1A0JD36 115 aa8.81□□□□□ -1
TRAFD1-202ENST00000412615 H0Y8G0 127 aa8.81□□□□□ -1
TRAFD1-202ENST00000412615 IGHG2P01859 326 aa8.81□□□□□ -1
TRAFD1-202ENST00000412615 PPBPP02775 128 aa8.81□□□□□ -1
TRAFD1-202ENST00000412615 C9orf47Q6ZRZ4 202 aa8.81□□□□□ -1
TRAFD1-202ENST00000412615 USMG5Q96IX5 58 aa8.81□□□□□ -1
TRAFD1-202ENST00000412615 C16orf92Q96LL3 132 aa8.81□□□□□ -1
TRAFD1-202ENST00000412615 ASH1LQ9NR48 2969 aaKnown RBP8.81□□□□□ -1
TRAFD1-202ENST00000412615 IGHV4-30-2A0A087WSY4 118 aa8.8□□□□□ -1
TRAFD1-202ENST00000412615 MSMBP08118 114 aa8.8□□□□□ -1
TRAFD1-202ENST00000412615 LY6EQ16553 131 aa8.8□□□□□ -1
TRAFD1-202ENST00000412615 GLMPQ8WWB7 406 aa8.8□□□□□ -1
TRAFD1-202ENST00000412615 PSMG3-AS1Q96PY0 264 aa8.8□□□□□ -1
TRAFD1-202ENST00000412615 MS4A6AQ9H2W1 248 aa8.8□□□□□ -1
TRAFD1-202ENST00000412615 AKAP6Q13023 2319 aa8.8□□□□□ -1
TRAFD1-202ENST00000412615 TMEM8BA6NDV4 472 aa8.8□□□□□ -1
TRAFD1-202ENST00000412615 A6NDX4 124 aa8.8□□□□□ -1
TRAFD1-202ENST00000412615 H3BUX3 64 aa8.8□□□□□ -1
TRAFD1-202ENST00000412615 NDUFA4O00483 81 aa8.8□□□□□ -1
TRAFD1-202ENST00000412615 FAM106AQ4KMX7 169 aa8.8□□□□□ -1
TRAFD1-202ENST00000412615 C9orf139Q6ZV77 190 aa8.8□□□□□ -1
TRAFD1-202ENST00000412615 STPG4Q8N801 248 aa8.8□□□□□ -1
TRAFD1-202ENST00000412615 CHTOPQ9Y3Y2 248 aaKnown RBP8.8□□□□□ -1
TRAFD1-202ENST00000412615 IGKV3D-20A0A0C4DH25 116 aa8.79□□□□□ -1
TRAFD1-202ENST00000412615 PPIFP30405 207 aaKnown RBP8.79□□□□□ -1
TRAFD1-202ENST00000412615 TMEM208Q9BTX3 173 aa8.79□□□□□ -1
TRAFD1-202ENST00000412615 MCRIP2Q9BUT9 160 aaKnown RBP8.79□□□□□ -1
TRAFD1-202ENST00000412615 MSRB1Q9NZV6 116 aa8.79□□□□□ -1
TRAFD1-202ENST00000412615 A0A096LNJ9 63 aa8.79□□□□□ -1
TRAFD1-202ENST00000412615 NPYP01303 97 aa8.79□□□□□ -1
TRAFD1-202ENST00000412615 TFPI2P48307 235 aa8.79□□□□□ -1
TRAFD1-202ENST00000412615 LOXL1Q08397 574 aaPredicted RBP8.79□□□□□ -1
TRAFD1-202ENST00000412615 CBY1Q9Y3M2 126 aa8.79□□□□□ -1
TRAFD1-202ENST00000412615 SMKR1H3BMG3 65 aa8.78□□□□□ -1
TRAFD1-202ENST00000412615 DLEU1O43261 78 aa8.78□□□□□ -1
TRAFD1-202ENST00000412615 TCF21O43680 179 aa8.78□□□□□ -1
TRAFD1-202ENST00000412615 HINT1P49773 126 aaPredicted RBP8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms