RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 NDUFC2-KCTD14E9PQ53 114 aa4.06□□□□□ -1.76
HERC4-205ENST00000412272 PEX7O00628 323 aa4.06□□□□□ -1.76
HERC4-205ENST00000412272 LYZL6O75951 148 aa4.06□□□□□ -1.76
HERC4-205ENST00000412272 CXCL5P42830 114 aa4.06□□□□□ -1.76
HERC4-205ENST00000412272 FGFBP3Q8TAT2 258 aa4.06□□□□□ -1.76
HERC4-205ENST00000412272 ABCA7Q8IZY2 2146 aa4.06□□□□□ -1.76
HERC4-205ENST00000412272 DMDP11532 3685 aa4.06□□□□□ -1.76
HERC4-205ENST00000412272 IGKV3D-11A0A0A0MRZ8 115 aa4.06□□□□□ -1.76
HERC4-205ENST00000412272 AAMDCQ9H7C9 122 aa4.06□□□□□ -1.76
HERC4-205ENST00000412272 PHPT1Q9NRX4 125 aaPredicted RBP4.06□□□□□ -1.76
HERC4-205ENST00000412272 H3BMM0 161 aa4.05□□□□□ -1.76
HERC4-205ENST00000412272 M0R135 149 aa4.05□□□□□ -1.76
HERC4-205ENST00000412272 CCL16O15467 120 aa4.05□□□□□ -1.76
HERC4-205ENST00000412272 DLX1P56177 255 aa4.05□□□□□ -1.76
HERC4-205ENST00000412272 NPC2P61916 151 aa4.05□□□□□ -1.76
HERC4-205ENST00000412272 FAM201AQ5SY85 155 aa4.05□□□□□ -1.76
HERC4-205ENST00000412272 C9orf139Q6ZV77 190 aa4.05□□□□□ -1.76
HERC4-205ENST00000412272 UBE2WQ96B02 151 aa4.05□□□□□ -1.76
HERC4-205ENST00000412272 MYOFQ9NZM1 2061 aa4.05□□□□□ -1.76
HERC4-205ENST00000412272 CCL21O00585 134 aa4.05□□□□□ -1.76
HERC4-205ENST00000412272 MSMPQ1L6U9 139 aa4.05□□□□□ -1.76
HERC4-205ENST00000412272 PRR15Q8IV56 129 aa4.05□□□□□ -1.76
HERC4-205ENST00000412272 NABP2Q9BQ15 211 aa4.05□□□□□ -1.76
HERC4-205ENST00000412272 IGF1P05019 195 aa4.05□□□□□ -1.76
HERC4-205ENST00000412272 EDDM3BP56851 147 aa4.05□□□□□ -1.76
HERC4-205ENST00000412272 ERCC8Q13216 396 aa4.05□□□□□ -1.76
HERC4-205ENST00000412272 FHL2Q14192 279 aa4.05□□□□□ -1.76
HERC4-205ENST00000412272 SS18Q15532 418 aa4.05□□□□□ -1.76
HERC4-205ENST00000412272 MDP1Q86V88 176 aa4.05□□□□□ -1.76
HERC4-205ENST00000412272 RNF182Q8N6D2 247 aa4.05□□□□□ -1.76
HERC4-205ENST00000412272 TET1Q8NFU7 2136 aa4.05□□□□□ -1.76
HERC4-205ENST00000412272 RPP21Q9H633 154 aaKnown RBP4.05□□□□□ -1.76
HERC4-205ENST00000412272 AMMECR1Q9Y4X0 333 aaPredicted RBP4.05□□□□□ -1.76
HERC4-205ENST00000412272 SMIM26A0A096LP01 95 aa4.04□□□□□ -1.76
HERC4-205ENST00000412272 A0A0G2JNJ9 132 aa4.04□□□□□ -1.76
HERC4-205ENST00000412272 CCL8P80075 99 aa4.04□□□□□ -1.76
HERC4-205ENST00000412272 TMEM170BQ5T4T1 132 aa4.04□□□□□ -1.76
HERC4-205ENST00000412272 SERP2Q8N6R1 65 aa4.04□□□□□ -1.76
HERC4-205ENST00000412272 NFAM1Q8NET5 270 aaPredicted RBP4.04□□□□□ -1.76
HERC4-205ENST00000412272 IFI27L1Q96BM0 104 aa4.04□□□□□ -1.76
HERC4-205ENST00000412272 Q9UFV3 132 aa4.04□□□□□ -1.76
HERC4-205ENST00000412272 UPK2O00526 184 aa4.04□□□□□ -1.76
HERC4-205ENST00000412272 SPRY2O43597 315 aa4.04□□□□□ -1.76
HERC4-205ENST00000412272 SS18L1O75177 396 aaPredicted RBP4.04□□□□□ -1.76
HERC4-205ENST00000412272 FCER1GP30273 86 aa4.04□□□□□ -1.76
HERC4-205ENST00000412272 BRWD1-AS2P59051 145 aa4.04□□□□□ -1.76
HERC4-205ENST00000412272 FAM27BQ5VT28 67 aa4.04□□□□□ -1.76
HERC4-205ENST00000412272 TMEM92Q6UXU6 159 aa4.04□□□□□ -1.76
HERC4-205ENST00000412272 NDUFA11Q86Y39 141 aa4.04□□□□□ -1.76
HERC4-205ENST00000412272 ZNF784Q8NCA9 323 aaPredicted RBP4.04□□□□□ -1.76
HERC4-205ENST00000412272 SSMEM1Q8WWF3 244 aa4.04□□□□□ -1.76
HERC4-205ENST00000412272 FOXB1Q99853 325 aa4.04□□□□□ -1.76
HERC4-205ENST00000412272 PLAUP00749 431 aa4.04□□□□□ -1.76
HERC4-205ENST00000412272 HES3Q5TGS1 186 aa4.04□□□□□ -1.76
HERC4-205ENST00000412272 MIC13Q5XKP0 118 aa4.04□□□□□ -1.76
HERC4-205ENST00000412272 PAX4O43316 350 aa4.03□□□□□ -1.76
HERC4-205ENST00000412272 CDAP32320 146 aa4.03□□□□□ -1.76
HERC4-205ENST00000412272 DAZ2Q13117 558 aaKnown RBP4.03□□□□□ -1.76
HERC4-205ENST00000412272 DAZ4Q86SG3 579 aaKnown RBP4.03□□□□□ -1.76
HERC4-205ENST00000412272 RNASE6Q93091 150 aaKnown RBP4.03□□□□□ -1.76
HERC4-205ENST00000412272 DAZ1Q9NQZ3 744 aaKnown RBP4.03□□□□□ -1.76
HERC4-205ENST00000412272 DAZ3Q9NR90 486 aaKnown RBP4.03□□□□□ -1.76
HERC4-205ENST00000412272 ZNF497Q6ZNH5 498 aa4.03□□□□□ -1.76
HERC4-205ENST00000412272 C20orf204Q6ZNR8 217 aa4.03□□□□□ -1.76
HERC4-205ENST00000412272 LINC00643Q86TS7 51 aa4.03□□□□□ -1.76
HERC4-205ENST00000412272 ZNF329Q86UD4 541 aa4.03□□□□□ -1.76
HERC4-205ENST00000412272 TRGV5A0A0B4J1U4 118 aa4.03□□□□□ -1.76
HERC4-205ENST00000412272 IFI27P40305 119 aaPredicted RBP4.03□□□□□ -1.76
HERC4-205ENST00000412272 NNATQ16517 81 aa4.03□□□□□ -1.76
HERC4-205ENST00000412272 CXorf67Q86X51 503 aaPredicted RBP4.03□□□□□ -1.76
HERC4-205ENST00000412272 MKXQ8IYA7 352 aa4.03□□□□□ -1.76
HERC4-205ENST00000412272 ZNF837Q96EG3 531 aaPredicted RBP4.03□□□□□ -1.76
HERC4-205ENST00000412272 METTL26Q96S19 204 aa4.03□□□□□ -1.76
HERC4-205ENST00000412272 GFRA3O60609 400 aa4.03□□□□□ -1.76
HERC4-205ENST00000412272 UBE2L3P68036 154 aaKnown RBP4.03□□□□□ -1.76
HERC4-205ENST00000412272 FAM167A-AS1Q96KT0 104 aa4.03□□□□□ -1.76
HERC4-205ENST00000412272 LTBP2Q14767 1821 aa4.02□□□□□ -1.77
HERC4-205ENST00000412272 TRBV7-1A0A0A6YYK4 115 aa4.02□□□□□ -1.77
HERC4-205ENST00000412272 TRBV10-2A0A0K0K1G8 114 aa4.02□□□□□ -1.77
HERC4-205ENST00000412272 ZNF137PP52743 207 aa4.02□□□□□ -1.77
HERC4-205ENST00000412272 RPL18AQ02543 176 aaKnown RBP4.02□□□□□ -1.77
HERC4-205ENST00000412272 FMC1Q96HJ9 113 aa4.02□□□□□ -1.77
HERC4-205ENST00000412272 ZNF714Q96N38 554 aa4.02□□□□□ -1.77
HERC4-205ENST00000412272 RTL8AQ9BWD3 113 aa4.02□□□□□ -1.77
HERC4-205ENST00000412272 HBDP02042 147 aa4.02□□□□□ -1.77
HERC4-205ENST00000412272 MIR17HGQ75NE6 70 aa4.02□□□□□ -1.77
HERC4-205ENST00000412272 RBM12B-AS1Q9P1G2 102 aa4.02□□□□□ -1.77
HERC4-205ENST00000412272 LY6G5CQ5SRR4 150 aa4.02□□□□□ -1.77
HERC4-205ENST00000412272 GFRALQ6UXV0 394 aa4.02□□□□□ -1.77
HERC4-205ENST00000412272 EMC6Q9BV81 110 aa4.02□□□□□ -1.77
HERC4-205ENST00000412272 LINC00474Q9P2X8 69 aa4.02□□□□□ -1.77
HERC4-205ENST00000412272 CABIN1Q9Y6J0 2220 aa4.01□□□□□ -1.77
HERC4-205ENST00000412272 PRSS38A1L453 326 aa4.01□□□□□ -1.77
HERC4-205ENST00000412272 FSTL3O95633 263 aa4.01□□□□□ -1.77
HERC4-205ENST00000412272 FXYD7P58549 80 aa4.01□□□□□ -1.77
HERC4-205ENST00000412272 MRPL55Q7Z7F7 128 aaKnown RBP4.01□□□□□ -1.77
HERC4-205ENST00000412272 PRSS3P2Q8NHM4 247 aa4.01□□□□□ -1.77
HERC4-205ENST00000412272 FOXC2Q99958 501 aa4.01□□□□□ -1.77
HERC4-205ENST00000412272 CCL26Q9Y258 94 aa4.01□□□□□ -1.77
HERC4-205ENST00000412272 C17orf98A8MV24 154 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms