RNA–Protein interactions for RNA: ENST00000409754.5

LIMS2-206, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LIMS2, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-206ENST00000409754 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.72□□□□□ -0.69
LIMS2-206ENST00000409754 MDFIQ99750 246 aa10.72□□□□□ -0.69
LIMS2-206ENST00000409754 RHPN1-AS1Q9BWJ2 59 aa10.72□□□□□ -0.69
LIMS2-206ENST00000409754 NAT8BQ9UHF3 227 aa10.72□□□□□ -0.69
LIMS2-206ENST00000409754 SMPXQ9UHP9 88 aa10.72□□□□□ -0.69
LIMS2-206ENST00000409754 ANK2Q01484 3957 aa10.72□□□□□ -0.69
LIMS2-206ENST00000409754 A8MWL6 223 aa10.71□□□□□ -0.69
LIMS2-206ENST00000409754 RNASE1P07998 156 aaKnown RBP10.71□□□□□ -0.69
LIMS2-206ENST00000409754 FABP9Q0Z7S8 132 aa10.71□□□□□ -0.69
LIMS2-206ENST00000409754 Q6ZSV7 163 aa10.71□□□□□ -0.69
LIMS2-206ENST00000409754 REC114Q7Z4M0 266 aa10.71□□□□□ -0.69
LIMS2-206ENST00000409754 RNF182Q8N6D2 247 aa10.71□□□□□ -0.69
LIMS2-206ENST00000409754 KLHDC1Q8N7A1 406 aa10.71□□□□□ -0.69
LIMS2-206ENST00000409754 VGLL1Q99990 258 aa10.71□□□□□ -0.69
LIMS2-206ENST00000409754 CT45A10P0DMU9 189 aa10.7□□□□□ -0.7
LIMS2-206ENST00000409754 PRB4P10163 310 aaPredicted RBP10.7□□□□□ -0.7
LIMS2-206ENST00000409754 BMI1P35226 326 aa10.7□□□□□ -0.7
LIMS2-206ENST00000409754 NDUFA6P56556 154 aa10.7□□□□□ -0.7
LIMS2-206ENST00000409754 C16orf92Q96LL3 132 aa10.7□□□□□ -0.7
LIMS2-206ENST00000409754 PRR25Q96S07 402 aa10.7□□□□□ -0.7
LIMS2-206ENST00000409754 NEU1Q99519 415 aa10.7□□□□□ -0.7
LIMS2-206ENST00000409754 GFRA4Q9GZZ7 299 aa10.7□□□□□ -0.7
LIMS2-206ENST00000409754 FAM231BA6NCW3 169 aa10.69□□□□□ -0.7
LIMS2-206ENST00000409754 PRAC2D3DTV9 90 aa10.69□□□□□ -0.7
LIMS2-206ENST00000409754 LGALS9O00182 355 aa10.69□□□□□ -0.7
LIMS2-206ENST00000409754 SOCS3O14543 225 aa10.69□□□□□ -0.7
LIMS2-206ENST00000409754 WDR73Q6P4I2 378 aa10.69□□□□□ -0.7
LIMS2-206ENST00000409754 RASL11AQ6T310 242 aa10.69□□□□□ -0.7
LIMS2-206ENST00000409754 NUP35Q8NFH5 326 aa10.69□□□□□ -0.7
LIMS2-206ENST00000409754 C8orf49Q96NF6 230 aa10.69□□□□□ -0.7
LIMS2-206ENST00000409754 GNB1LQ9BYB4 327 aa10.69□□□□□ -0.7
LIMS2-206ENST00000409754 IGHV4OR15-8A0A075B7B6 117 aa10.69□□□□□ -0.7
LIMS2-206ENST00000409754 A0A087WW49 117 aa10.69□□□□□ -0.7
LIMS2-206ENST00000409754 HIGD1CA8MV81 97 aa10.69□□□□□ -0.7
LIMS2-206ENST00000409754 A8MWP6 167 aa10.69□□□□□ -0.7
LIMS2-206ENST00000409754 MT-ND6P03923 174 aa10.69□□□□□ -0.7
LIMS2-206ENST00000409754 HOXA5P20719 270 aa10.69□□□□□ -0.7
LIMS2-206ENST00000409754 CBLN1P23435 193 aa10.69□□□□□ -0.7
LIMS2-206ENST00000409754 CRIP1P50238 77 aa10.69□□□□□ -0.7
LIMS2-206ENST00000409754 KRTAP21-3Q3LHN1 58 aa10.69□□□□□ -0.7
LIMS2-206ENST00000409754 WIPF2Q8TF74 440 aaPredicted RBP10.69□□□□□ -0.7
LIMS2-206ENST00000409754 ASCL2Q99929 193 aa10.69□□□□□ -0.7
LIMS2-206ENST00000409754 NDFIP1Q9BT67 221 aa10.69□□□□□ -0.7
LIMS2-206ENST00000409754 NRN1Q9NPD7 142 aa10.69□□□□□ -0.7
LIMS2-206ENST00000409754 TMEM213A2RRL7 107 aa10.68□□□□□ -0.7
LIMS2-206ENST00000409754 SPINK4O60575 86 aa10.68□□□□□ -0.7
LIMS2-206ENST00000409754 CDX1P47902 265 aaPredicted RBP10.68□□□□□ -0.7
LIMS2-206ENST00000409754 OR2D3Q8NGH3 330 aa10.68□□□□□ -0.7
LIMS2-206ENST00000409754 SNURFLB1AK76 121 aa10.67□□□□□ -0.7
LIMS2-206ENST00000409754 FRMD6-AS1P0C7T7 363 aa10.67□□□□□ -0.7
LIMS2-206ENST00000409754 HOXD3P31249 432 aaPredicted RBP10.67□□□□□ -0.7
LIMS2-206ENST00000409754 ERCC8Q13216 396 aa10.67□□□□□ -0.7
LIMS2-206ENST00000409754 FAM162BQ5T6X4 162 aa10.67□□□□□ -0.7
LIMS2-206ENST00000409754 SAMD13Q5VXD3 122 aa10.67□□□□□ -0.7
LIMS2-206ENST00000409754 MRPL54Q6P161 138 aaKnown RBP10.67□□□□□ -0.7
LIMS2-206ENST00000409754 TMEM136Q6ZRR5 245 aa10.67□□□□□ -0.7
LIMS2-206ENST00000409754 TCF24Q7RTU0 167 aa10.67□□□□□ -0.7
LIMS2-206ENST00000409754 ATP5L2Q7Z4Y8 100 aa10.67□□□□□ -0.7
LIMS2-206ENST00000409754 Q8TAT8 98 aa10.67□□□□□ -0.7
LIMS2-206ENST00000409754 MRPL18Q9H0U6 180 aaKnown RBP10.67□□□□□ -0.7
LIMS2-206ENST00000409754 PPP1R14DQ9NXH3 145 aa10.67□□□□□ -0.7
LIMS2-206ENST00000409754 FOXA3P55318 350 aaPredicted RBP10.66□□□□□ -0.7
LIMS2-206ENST00000409754 RPL11P62913 178 aaKnown RBP10.66□□□□□ -0.7
LIMS2-206ENST00000409754 SMUG1Q53HV7 270 aa10.66□□□□□ -0.7
LIMS2-206ENST00000409754 RBPMS2Q6ZRY4 209 aaKnown RBP10.66□□□□□ -0.7
LIMS2-206ENST00000409754 C9orf47Q6ZRZ4 202 aa10.66□□□□□ -0.7
LIMS2-206ENST00000409754 C4orf3Q8WVX3 66 aa10.66□□□□□ -0.7
LIMS2-206ENST00000409754 GTSF1Q8WW33 167 aa10.66□□□□□ -0.7
LIMS2-206ENST00000409754 C20orf173Q96LM9 149 aa10.66□□□□□ -0.7
LIMS2-206ENST00000409754 JMJD8Q96S16 334 aa10.66□□□□□ -0.7
LIMS2-206ENST00000409754 AGPAT4-IT1Q9H0P7 198 aa10.66□□□□□ -0.7
LIMS2-206ENST00000409754 SH2D1AO60880 128 aa10.66□□□□□ -0.7
LIMS2-206ENST00000409754 HLA-DQA1P01909 254 aa10.66□□□□□ -0.7
LIMS2-206ENST00000409754 EDN2P20800 178 aa10.66□□□□□ -0.7
LIMS2-206ENST00000409754 SYNJ2BPP57105 145 aa10.66□□□□□ -0.7
LIMS2-206ENST00000409754 TCTEX1D4Q5JR98 221 aa10.66□□□□□ -0.7
LIMS2-206ENST00000409754 COA6Q5JTJ3 125 aaKnown RBP10.66□□□□□ -0.7
LIMS2-206ENST00000409754 TMEM78Q5T7P6 136 aa10.66□□□□□ -0.7
LIMS2-206ENST00000409754 ZNF738Q8NE65 137 aa10.66□□□□□ -0.7
LIMS2-206ENST00000409754 WFDC12Q8WWY7 111 aa10.66□□□□□ -0.7
LIMS2-206ENST00000409754 GPR61Q9BZJ8 451 aa10.66□□□□□ -0.7
LIMS2-206ENST00000409754 A0A1B0GXF2 115 aa10.65□□□□□ -0.7
LIMS2-206ENST00000409754 OVOL1O14753 267 aa10.65□□□□□ -0.7
LIMS2-206ENST00000409754 AKR1D1P51857 326 aa10.65□□□□□ -0.7
LIMS2-206ENST00000409754 ZNF138P52744 262 aa10.65□□□□□ -0.7
LIMS2-206ENST00000409754 KLF5Q13887 457 aaPredicted RBP10.65□□□□□ -0.7
LIMS2-206ENST00000409754 C16orf95Q9H693 158 aa10.65□□□□□ -0.7
LIMS2-206ENST00000409754 XKRY2A2RUG3 117 aa10.64□□□□□ -0.71
LIMS2-206ENST00000409754 LINC01619G3V211 115 aa10.64□□□□□ -0.71
LIMS2-206ENST00000409754 C18orf65Q6ZTR6 163 aa10.64□□□□□ -0.71
LIMS2-206ENST00000409754 LENEPQ9Y5L5 61 aa10.64□□□□□ -0.71
LIMS2-206ENST00000409754 TMEM189A5PLL7 270 aa10.63□□□□□ -0.71
LIMS2-206ENST00000409754 ID1P41134 155 aa10.63□□□□□ -0.71
LIMS2-206ENST00000409754 ZNF80P51504 273 aaPredicted RBP10.63□□□□□ -0.71
LIMS2-206ENST00000409754 RAB4BP61018 213 aa10.63□□□□□ -0.71
LIMS2-206ENST00000409754 Q6AWC8 147 aa10.63□□□□□ -0.71
LIMS2-206ENST00000409754 HIST3H2BBQ8N257 126 aa10.63□□□□□ -0.71
LIMS2-206ENST00000409754 PGLYRP4Q96LB8 373 aa10.63□□□□□ -0.71
LIMS2-206ENST00000409754 VWFP04275 2813 aa10.63□□□□□ -0.71
LIMS2-206ENST00000409754 C2orf70A6NJV1 201 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms