RNA–Protein interactions for RNA: ENST00000409478.5

R3HDM1-202, Transcript of R3H domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene R3HDM1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-202ENST00000409478 SHANK2-AS3Q9BTD1 123 aa4.58□□□□□ -1.68
R3HDM1-202ENST00000409478 HIF1ANQ9NWT6 349 aa4.58□□□□□ -1.68
R3HDM1-202ENST00000409478 DNAJC13O75165 2243 aa4.58□□□□□ -1.68
R3HDM1-202ENST00000409478 F8VRH5 84 aa4.58□□□□□ -1.68
R3HDM1-202ENST00000409478 CCDC179H3BU77 68 aa4.58□□□□□ -1.68
R3HDM1-202ENST00000409478 NDUFA3O95167 84 aa4.58□□□□□ -1.68
R3HDM1-202ENST00000409478 PRR30Q53SZ7 412 aaPredicted RBP4.58□□□□□ -1.68
R3HDM1-202ENST00000409478 RASL11BQ9BPW5 248 aa4.58□□□□□ -1.68
R3HDM1-202ENST00000409478 CHD9Q3L8U1 2897 aa4.58□□□□□ -1.68
R3HDM1-202ENST00000409478 IGLV2-23P01705 113 aa4.58□□□□□ -1.68
R3HDM1-202ENST00000409478 CCL4P13236 92 aa4.58□□□□□ -1.68
R3HDM1-202ENST00000409478 TMEM78Q5T7P6 136 aa4.58□□□□□ -1.68
R3HDM1-202ENST00000409478 HCP5Q6MZN7 132 aa4.58□□□□□ -1.68
R3HDM1-202ENST00000409478 Q6ZT83 130 aa4.58□□□□□ -1.68
R3HDM1-202ENST00000409478 C1orf162Q8NEQ5 155 aaPredicted RBP4.58□□□□□ -1.68
R3HDM1-202ENST00000409478 PCSK5Q92824 1860 aa4.58□□□□□ -1.68
R3HDM1-202ENST00000409478 DYSFO75923 2080 aa4.58□□□□□ -1.68
R3HDM1-202ENST00000409478 H3BRN7 92 aa4.58□□□□□ -1.68
R3HDM1-202ENST00000409478 H3BVH4 76 aa4.58□□□□□ -1.68
R3HDM1-202ENST00000409478 K7ESF4 209 aa4.58□□□□□ -1.68
R3HDM1-202ENST00000409478 LGALS1P09382 135 aaKnown RBP4.58□□□□□ -1.68
R3HDM1-202ENST00000409478 CD40P25942 277 aa4.58□□□□□ -1.68
R3HDM1-202ENST00000409478 HES7Q9BYE0 225 aa4.58□□□□□ -1.68
R3HDM1-202ENST00000409478 TMEM126AQ9H061 195 aa4.58□□□□□ -1.68
R3HDM1-202ENST00000409478 RAXQ9Y2V3 346 aa4.58□□□□□ -1.68
R3HDM1-202ENST00000409478 TANC2Q9HCD6 1990 aa4.57□□□□□ -1.68
R3HDM1-202ENST00000409478 TCL1BO95988 128 aa4.57□□□□□ -1.68
R3HDM1-202ENST00000409478 CECR9P0C854 216 aa4.57□□□□□ -1.68
R3HDM1-202ENST00000409478 SRSF9Q13242 221 aaKnown RBP eCLIP4.57□□□□□ -1.68
R3HDM1-202ENST00000409478 RUSC1-AS1Q66K80 236 aa4.57□□□□□ -1.68
R3HDM1-202ENST00000409478 ZFP2Q6ZN57 461 aa4.57□□□□□ -1.68
R3HDM1-202ENST00000409478 SAP25Q8TEE9 199 aa4.57□□□□□ -1.68
R3HDM1-202ENST00000409478 ASCL2Q99929 193 aa4.57□□□□□ -1.68
R3HDM1-202ENST00000409478 IGLV2-18A0A075B6J9 118 aa4.57□□□□□ -1.68
R3HDM1-202ENST00000409478 TRAV8-2A0A0B4J237 113 aa4.57□□□□□ -1.68
R3HDM1-202ENST00000409478 OR10J6PQ8NGY7 276 aa4.57□□□□□ -1.68
R3HDM1-202ENST00000409478 YAE1D1Q9NRH1 226 aa4.57□□□□□ -1.68
R3HDM1-202ENST00000409478 SPTBN4Q9H254 2564 aa4.57□□□□□ -1.68
R3HDM1-202ENST00000409478 EGR2P11161 476 aaPredicted RBP4.57□□□□□ -1.68
R3HDM1-202ENST00000409478 RPL27AP46776 148 aaKnown RBP4.57□□□□□ -1.68
R3HDM1-202ENST00000409478 SCGB1D4Q6XE38 83 aa4.57□□□□□ -1.68
R3HDM1-202ENST00000409478 AJUBAQ96IF1 538 aa4.57□□□□□ -1.68
R3HDM1-202ENST00000409478 GAFA1Q96PS6 74 aa4.57□□□□□ -1.68
R3HDM1-202ENST00000409478 KIR2DL4Q99706 377 aa4.57□□□□□ -1.68
R3HDM1-202ENST00000409478 CACNA1AO00555 2505 aa4.56□□□□□ -1.68
R3HDM1-202ENST00000409478 TRIOO75962 3097 aa4.56□□□□□ -1.68
R3HDM1-202ENST00000409478 BRI3O95415 125 aa4.56□□□□□ -1.68
R3HDM1-202ENST00000409478 NDUFA11Q86Y39 141 aa4.56□□□□□ -1.68
R3HDM1-202ENST00000409478 C17orf77Q96MU5 243 aa4.56□□□□□ -1.68
R3HDM1-202ENST00000409478 ZNRD1Q9P1U0 126 aa4.56□□□□□ -1.68
R3HDM1-202ENST00000409478 RNF7Q9UBF6 113 aa4.56□□□□□ -1.68
R3HDM1-202ENST00000409478 IGLV1-44P01699 117 aa4.56□□□□□ -1.68
R3HDM1-202ENST00000409478 GATA4P43694 442 aa4.56□□□□□ -1.68
R3HDM1-202ENST00000409478 PRR25Q96S07 402 aa4.56□□□□□ -1.68
R3HDM1-202ENST00000409478 PROCRQ9UNN8 238 aa4.56□□□□□ -1.68
R3HDM1-202ENST00000409478 IGHV3-21A0A0B4J1V1 117 aa4.56□□□□□ -1.68
R3HDM1-202ENST00000409478 ZNF815PA8K554 130 aa4.56□□□□□ -1.68
R3HDM1-202ENST00000409478 SLC25A20O43772 301 aa4.56□□□□□ -1.68
R3HDM1-202ENST00000409478 CD7P09564 240 aa4.56□□□□□ -1.68
R3HDM1-202ENST00000409478 C8orf31Q8N9H6 132 aa4.56□□□□□ -1.68
R3HDM1-202ENST00000409478 TECTAO75443 2155 aa4.55□□□□□ -1.68
R3HDM1-202ENST00000409478 TRAV4A0A0B4J268 109 aa4.55□□□□□ -1.68
R3HDM1-202ENST00000409478 NTN3O00634 580 aaPredicted RBP4.55□□□□□ -1.68
R3HDM1-202ENST00000409478 SLC25A16P16260 332 aa4.55□□□□□ -1.68
R3HDM1-202ENST00000409478 WT1P19544 449 aaPredicted RBP4.55□□□□□ -1.68
R3HDM1-202ENST00000409478 MRPL23Q16540 153 aaKnown RBP4.55□□□□□ -1.68
R3HDM1-202ENST00000409478 FAM159AQ6UWV7 190 aa4.55□□□□□ -1.68
R3HDM1-202ENST00000409478 SRSF8Q9BRL6 282 aaKnown RBP4.55□□□□□ -1.68
R3HDM1-202ENST00000409478 TRGV5A0A0B4J1U4 118 aa4.55□□□□□ -1.68
R3HDM1-202ENST00000409478 M0R3E3 92 aa4.55□□□□□ -1.68
R3HDM1-202ENST00000409478 MRPS12O15235 138 aaKnown RBP4.55□□□□□ -1.68
R3HDM1-202ENST00000409478 MEIG1Q5JSS6 88 aa4.55□□□□□ -1.68
R3HDM1-202ENST00000409478 C6orf15Q6UXA7 325 aaPredicted RBP4.55□□□□□ -1.68
R3HDM1-202ENST00000409478 DTX2Q86UW9 622 aa4.55□□□□□ -1.68
R3HDM1-202ENST00000409478 LINC00311Q8N616 119 aa4.55□□□□□ -1.68
R3HDM1-202ENST00000409478 MDFICQ9P1T7 246 aa4.55□□□□□ -1.68
R3HDM1-202ENST00000409478 DKK4Q9UBT3 224 aa4.55□□□□□ -1.68
R3HDM1-202ENST00000409478 EYSQ5T1H1 3165 aa4.55□□□□□ -1.68
R3HDM1-202ENST00000409478 PRTN3P24158 256 aa4.55□□□□□ -1.68
R3HDM1-202ENST00000409478 ANXA2RQ3ZCQ2 193 aa4.55□□□□□ -1.68
R3HDM1-202ENST00000409478 ORMDL2Q53FV1 153 aa4.55□□□□□ -1.68
R3HDM1-202ENST00000409478 DUX4L9Q6RFH8 374 aaPredicted RBP4.55□□□□□ -1.68
R3HDM1-202ENST00000409478 C10orf126Q8N4M7 172 aa4.55□□□□□ -1.68
R3HDM1-202ENST00000409478 CCL13Q99616 98 aa4.55□□□□□ -1.68
R3HDM1-202ENST00000409478 TRANK1O15050 2925 aa4.55□□□□□ -1.68
R3HDM1-202ENST00000409478 IGHV1-18A0A0C4DH31 117 aa4.55□□□□□ -1.68
R3HDM1-202ENST00000409478 GAS8-AS1O95177 125 aa4.55□□□□□ -1.68
R3HDM1-202ENST00000409478 ORM1P02763 201 aa4.55□□□□□ -1.68
R3HDM1-202ENST00000409478 HLA-DMBP28068 263 aa4.55□□□□□ -1.68
R3HDM1-202ENST00000409478 SFTA2Q6UW10 78 aa4.55□□□□□ -1.68
R3HDM1-202ENST00000409478 IL17RELQ6ZVW7 336 aa4.55□□□□□ -1.68
R3HDM1-202ENST00000409478 PRADC1Q9BSG0 188 aa4.55□□□□□ -1.68
R3HDM1-202ENST00000409478 TPSG1Q9NRR2 321 aa4.55□□□□□ -1.68
R3HDM1-202ENST00000409478 MSRB1Q9NZV6 116 aa4.55□□□□□ -1.68
R3HDM1-202ENST00000409478 AKAP6Q13023 2319 aa4.54□□□□□ -1.68
R3HDM1-202ENST00000409478 COL6A3P12111 3177 aa4.54□□□□□ -1.68
R3HDM1-202ENST00000409478 SPTBN1Q01082 2364 aaKnown RBP4.54□□□□□ -1.68
R3HDM1-202ENST00000409478 TRAV8-4A0A0B4J246 113 aa4.54□□□□□ -1.68
R3HDM1-202ENST00000409478 LINC01548A6NM66 108 aa4.54□□□□□ -1.68
R3HDM1-202ENST00000409478 J3KRW8 73 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms