RNA–Protein interactions for RNA: ENST00000409441.5

LIMS1-204, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS1, Length 1,627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-204ENST00000409441 LINC01619G3V211 115 aa10.25□□□□□ -0.77
LIMS1-204ENST00000409441 BMPR1BO00238 502 aa10.25□□□□□ -0.77
LIMS1-204ENST00000409441 HLA-DQA1P01909 254 aa10.25□□□□□ -0.77
LIMS1-204ENST00000409441 SIGLEC15Q6ZMC9 328 aa10.25□□□□□ -0.77
LIMS1-204ENST00000409441 Q86TA4 180 aa10.25□□□□□ -0.77
LIMS1-204ENST00000409441 TMEM75Q8N9X5 138 aa10.25□□□□□ -0.77
LIMS1-204ENST00000409441 SPATA3Q8NHX4 192 aa10.25□□□□□ -0.77
LIMS1-204ENST00000409441 ZNF414Q96IQ9 312 aa10.25□□□□□ -0.77
LIMS1-204ENST00000409441 H3BTX0 84 aa10.24□□□□□ -0.77
LIMS1-204ENST00000409441 K7EQM0 130 aa10.24□□□□□ -0.77
LIMS1-204ENST00000409441 TMEM136Q6ZRR5 245 aa10.24□□□□□ -0.77
LIMS1-204ENST00000409441 GBGT1Q8N5D6 347 aa10.24□□□□□ -0.77
LIMS1-204ENST00000409441 TSKUQ8WUA8 353 aa10.24□□□□□ -0.77
LIMS1-204ENST00000409441 NAT8BQ9UHF3 227 aa10.24□□□□□ -0.77
LIMS1-204ENST00000409441 RABAC1Q9UI14 185 aa10.24□□□□□ -0.77
LIMS1-204ENST00000409441 SERTM2A0A1B0GWG4 89 aa10.23□□□□□ -0.77
LIMS1-204ENST00000409441 C19orf71A6NCJ1 209 aa10.23□□□□□ -0.77
LIMS1-204ENST00000409441 M0QZ24 198 aa10.23□□□□□ -0.77
LIMS1-204ENST00000409441 RPL7P18124 248 aaKnown RBP10.23□□□□□ -0.77
LIMS1-204ENST00000409441 HOXD3P31249 432 aaPredicted RBP10.23□□□□□ -0.77
LIMS1-204ENST00000409441 TCL1AP56279 114 aa10.23□□□□□ -0.77
LIMS1-204ENST00000409441 Q0VG73 95 aa10.23□□□□□ -0.77
LIMS1-204ENST00000409441 ATP5L2Q7Z4Y8 100 aa10.23□□□□□ -0.77
LIMS1-204ENST00000409441 EXOC3-AS1Q8N2X6 119 aa10.23□□□□□ -0.77
LIMS1-204ENST00000409441 RPP21Q9H633 154 aaKnown RBP10.23□□□□□ -0.77
LIMS1-204ENST00000409441 ZNF331Q9NQX6 463 aaPredicted RBP10.23□□□□□ -0.77
LIMS1-204ENST00000409441 GSN-AS1Q9NRJ2 163 aa10.23□□□□□ -0.77
LIMS1-204ENST00000409441 IGHV3-35A0A0C4DH35 117 aa10.22□□□□□ -0.77
LIMS1-204ENST00000409441 ESDP10768 282 aa10.22□□□□□ -0.77
LIMS1-204ENST00000409441 CRISP2P16562 243 aa10.22□□□□□ -0.77
LIMS1-204ENST00000409441 SLURP1P55000 103 aa10.22□□□□□ -0.77
LIMS1-204ENST00000409441 PSG9Q00887 426 aa10.22□□□□□ -0.77
LIMS1-204ENST00000409441 FHL3Q13643 280 aa10.22□□□□□ -0.77
LIMS1-204ENST00000409441 JOSD1Q15040 202 aaPredicted RBP10.22□□□□□ -0.77
LIMS1-204ENST00000409441 PRR27Q6MZM9 219 aa10.22□□□□□ -0.77
LIMS1-204ENST00000409441 OR4B1Q8NGF8 309 aa10.22□□□□□ -0.77
LIMS1-204ENST00000409441 AAMDCQ9H7C9 122 aa10.22□□□□□ -0.77
LIMS1-204ENST00000409441 ZFP30Q9Y2G7 519 aa10.22□□□□□ -0.77
LIMS1-204ENST00000409441 A8MWL6 223 aa10.22□□□□□ -0.77
LIMS1-204ENST00000409441 ZNF253O75346 499 aa10.22□□□□□ -0.77
LIMS1-204ENST00000409441 IGLV2-11P01706 119 aa10.22□□□□□ -0.77
LIMS1-204ENST00000409441 PF4P02776 101 aa10.22□□□□□ -0.77
LIMS1-204ENST00000409441 KLF5Q13887 457 aaPredicted RBP10.22□□□□□ -0.77
LIMS1-204ENST00000409441 GOLT1AQ6ZVE7 132 aa10.22□□□□□ -0.77
LIMS1-204ENST00000409441 GPHB5Q86YW7 130 aa10.22□□□□□ -0.77
LIMS1-204ENST00000409441 DAZAP1Q96EP5 407 aaKnown RBP10.22□□□□□ -0.77
LIMS1-204ENST00000409441 GFRA4Q9GZZ7 299 aa10.22□□□□□ -0.77
LIMS1-204ENST00000409441 FAM231BA6NCW3 169 aa10.21□□□□□ -0.78
LIMS1-204ENST00000409441 FBLL1A6NHQ2 334 aaKnown RBP10.21□□□□□ -0.78
LIMS1-204ENST00000409441 NPIPB6E9PJ23 425 aa10.21□□□□□ -0.78
LIMS1-204ENST00000409441 CA1P00915 261 aaPredicted RBP10.21□□□□□ -0.78
LIMS1-204ENST00000409441 P01737 135 aa10.21□□□□□ -0.78
LIMS1-204ENST00000409441 RELQ04864 619 aaPredicted RBP10.21□□□□□ -0.78
LIMS1-204ENST00000409441 FAM106AQ4KMX7 169 aa10.21□□□□□ -0.78
LIMS1-204ENST00000409441 MRPL54Q6P161 138 aaKnown RBP10.21□□□□□ -0.78
LIMS1-204ENST00000409441 NUP35Q8NFH5 326 aa10.21□□□□□ -0.78
LIMS1-204ENST00000409441 DLX4Q92988 240 aaPredicted RBP10.21□□□□□ -0.78
LIMS1-204ENST00000409441 C17orf77Q96MU5 243 aa10.21□□□□□ -0.78
LIMS1-204ENST00000409441 DIRC3C9JPN6 131 aa10.2□□□□□ -0.78
LIMS1-204ENST00000409441 CSN1S1P47710 185 aa10.2□□□□□ -0.78
LIMS1-204ENST00000409441 SYNJ2BPP57105 145 aa10.2□□□□□ -0.78
LIMS1-204ENST00000409441 PAFAH1B2P68402 229 aa10.2□□□□□ -0.78
LIMS1-204ENST00000409441 PSG3Q16557 428 aa10.2□□□□□ -0.78
LIMS1-204ENST00000409441 OR10J3Q5JRS4 329 aa10.2□□□□□ -0.78
LIMS1-204ENST00000409441 SGK494Q96LW2 274 aa10.2□□□□□ -0.78
LIMS1-204ENST00000409441 NEU1Q99519 415 aa10.2□□□□□ -0.78
LIMS1-204ENST00000409441 WNK1Q9H4A3 2382 aa10.19□□□□□ -0.78
LIMS1-204ENST00000409441 SPINK4O60575 86 aa10.19□□□□□ -0.78
LIMS1-204ENST00000409441 FRMD6-AS1P0C7T7 363 aa10.19□□□□□ -0.78
LIMS1-204ENST00000409441 C16orf54Q6UWD8 224 aa10.19□□□□□ -0.78
LIMS1-204ENST00000409441 TOMM20LQ6UXN7 152 aa10.19□□□□□ -0.78
LIMS1-204ENST00000409441 PRNTQ86SH4 94 aa10.19□□□□□ -0.78
LIMS1-204ENST00000409441 TMEM256Q8N2U0 113 aa10.19□□□□□ -0.78
LIMS1-204ENST00000409441 PSG8Q9UQ74 426 aa10.19□□□□□ -0.78
LIMS1-204ENST00000409441 GRIFINA4D1Z8 144 aa10.18□□□□□ -0.78
LIMS1-204ENST00000409441 HIGD1CA8MV81 97 aa10.18□□□□□ -0.78
LIMS1-204ENST00000409441 NDUFA4O00483 81 aa10.18□□□□□ -0.78
LIMS1-204ENST00000409441 APCSP02743 223 aa10.18□□□□□ -0.78
LIMS1-204ENST00000409441 RAB4BP61018 213 aa10.18□□□□□ -0.78
LIMS1-204ENST00000409441 UNQ9165/PRO28630Q6UXU0 137 aa10.18□□□□□ -0.78
LIMS1-204ENST00000409441 LINC00322Q6ZN03 302 aaPredicted RBP10.18□□□□□ -0.78
LIMS1-204ENST00000409441 LINC00482Q8N8I6 264 aa10.18□□□□□ -0.78
LIMS1-204ENST00000409441 ZFAND3Q9H8U3 227 aa10.18□□□□□ -0.78
LIMS1-204ENST00000409441 TP53TG3Q9ULZ0 132 aa10.18□□□□□ -0.78
LIMS1-204ENST00000409441 IGHV3OR16-8A0A075B7F1 116 aa10.18□□□□□ -0.78
LIMS1-204ENST00000409441 A0A087X0K7 114 aa10.18□□□□□ -0.78
LIMS1-204ENST00000409441 TRAV8-1A0A0A6YYK1 113 aa10.18□□□□□ -0.78
LIMS1-204ENST00000409441 A0A1B0GXF2 115 aa10.18□□□□□ -0.78
LIMS1-204ENST00000409441 LGALS9O00182 355 aa10.18□□□□□ -0.78
LIMS1-204ENST00000409441 BAGE3Q86Y29 109 aa10.18□□□□□ -0.78
LIMS1-204ENST00000409441 OVOL1O14753 267 aa10.17□□□□□ -0.78
LIMS1-204ENST00000409441 GZMBP10144 247 aa10.17□□□□□ -0.78
LIMS1-204ENST00000409441 RBPMS2Q6ZRY4 209 aaKnown RBP10.17□□□□□ -0.78
LIMS1-204ENST00000409441 REC114Q7Z4M0 266 aa10.17□□□□□ -0.78
LIMS1-204ENST00000409441 WFDC9Q8NEX5 89 aa10.17□□□□□ -0.78
LIMS1-204ENST00000409441 VWFP04275 2813 aa10.16□□□□□ -0.78
LIMS1-204ENST00000409441 SERF1AO75920 110 aa10.16□□□□□ -0.78
LIMS1-204ENST00000409441 LINC00310P59036 64 aa10.16□□□□□ -0.78
LIMS1-204ENST00000409441 HBBP68871 147 aa10.16□□□□□ -0.78
LIMS1-204ENST00000409441 TM4SF20Q53R12 229 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms