RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 FAM53AQ6NSI3 398 aaPredicted RBP8.42□□□□□ -1.06
NIF3L1-204ENST00000409357 C11orf53Q8IXP5 236 aa8.42□□□□□ -1.06
NIF3L1-204ENST00000409357 VKORC1L1Q8N0U8 176 aa8.42□□□□□ -1.06
NIF3L1-204ENST00000409357 TMEM116Q8NCL8 245 aa8.42□□□□□ -1.06
NIF3L1-204ENST00000409357 TMEM14CQ9P0S9 112 aa8.42□□□□□ -1.06
NIF3L1-204ENST00000409357 K7ERJ3 54 aa8.41□□□□□ -1.06
NIF3L1-204ENST00000409357 CGB3P0DN86 165 aa8.41□□□□□ -1.06
NIF3L1-204ENST00000409357 CGB7P0DN87 165 aa8.41□□□□□ -1.06
NIF3L1-204ENST00000409357 COL8A2P25067 703 aa8.41□□□□□ -1.06
NIF3L1-204ENST00000409357 SMCPP49901 116 aaPredicted RBP8.41□□□□□ -1.06
NIF3L1-204ENST00000409357 GNG5P63218 68 aa8.41□□□□□ -1.06
NIF3L1-204ENST00000409357 ERHP84090 104 aaKnown RBP8.41□□□□□ -1.06
NIF3L1-204ENST00000409357 PVRIGQ6DKI7 326 aa8.41□□□□□ -1.06
NIF3L1-204ENST00000409357 C9orf106Q8NAJ2 232 aa8.41□□□□□ -1.06
NIF3L1-204ENST00000409357 RPEQ96AT9 228 aa8.41□□□□□ -1.06
NIF3L1-204ENST00000409357 HARBI1Q96MB7 349 aa8.41□□□□□ -1.06
NIF3L1-204ENST00000409357 GNG12Q9UBI6 72 aa8.41□□□□□ -1.06
NIF3L1-204ENST00000409357 F11RQ9Y624 299 aaKnown RBP8.41□□□□□ -1.06
NIF3L1-204ENST00000409357 SETD2Q9BYW2 2564 aaPredicted RBP8.4□□□□□ -1.06
NIF3L1-204ENST00000409357 TRBV20-1A0A075B6N2 111 aa8.4□□□□□ -1.06
NIF3L1-204ENST00000409357 IGKV1D-37A0A075B6S9 117 aa8.4□□□□□ -1.06
NIF3L1-204ENST00000409357 C16orf97H3BN30 126 aa8.4□□□□□ -1.06
NIF3L1-204ENST00000409357 DPM2O94777 84 aa8.4□□□□□ -1.06
NIF3L1-204ENST00000409357 IGLV2-11P01706 119 aa8.4□□□□□ -1.06
NIF3L1-204ENST00000409357 ARMS2P0C7Q2 107 aa8.4□□□□□ -1.06
NIF3L1-204ENST00000409357 ZNF688P0C7X2 276 aa8.4□□□□□ -1.06
NIF3L1-204ENST00000409357 FCER1GP30273 86 aa8.4□□□□□ -1.06
NIF3L1-204ENST00000409357 TWIST1Q15672 202 aa8.4□□□□□ -1.06
NIF3L1-204ENST00000409357 TBC1D28Q2M2D7 210 aa8.4□□□□□ -1.06
NIF3L1-204ENST00000409357 COX8CQ7Z4L0 72 aa8.4□□□□□ -1.06
NIF3L1-204ENST00000409357 TMEM75Q8N9X5 138 aa8.4□□□□□ -1.06
NIF3L1-204ENST00000409357 OSR1Q8TAX0 266 aaPredicted RBP8.4□□□□□ -1.06
NIF3L1-204ENST00000409357 SLC25A39Q9BZJ4 359 aaPredicted RBP8.4□□□□□ -1.06
NIF3L1-204ENST00000409357 CXXC4Q9H2H0 198 aa8.4□□□□□ -1.06
NIF3L1-204ENST00000409357 NDUFA4L2Q9NRX3 87 aa8.4□□□□□ -1.06
NIF3L1-204ENST00000409357 UFC1Q9Y3C8 167 aa8.4□□□□□ -1.06
NIF3L1-204ENST00000409357 IGKV2D-26A0A0A0MRZ7 120 aa8.4□□□□□ -1.07
NIF3L1-204ENST00000409357 IGHV3-43A0A0B4J1X8 118 aa8.4□□□□□ -1.07
NIF3L1-204ENST00000409357 B5MCH6 92 aa8.4□□□□□ -1.07
NIF3L1-204ENST00000409357 CLEC3BP05452 202 aa8.4□□□□□ -1.07
NIF3L1-204ENST00000409357 IGHV3-43DP0DP04 118 aa8.4□□□□□ -1.07
NIF3L1-204ENST00000409357 GP9P14770 177 aa8.4□□□□□ -1.07
NIF3L1-204ENST00000409357 TNFRSF1AP19438 455 aa8.4□□□□□ -1.07
NIF3L1-204ENST00000409357 LOXL1Q08397 574 aaPredicted RBP8.4□□□□□ -1.07
NIF3L1-204ENST00000409357 LINC00305Q7Z4B0 112 aa8.4□□□□□ -1.07
NIF3L1-204ENST00000409357 NFE4Q86UQ8 179 aa8.4□□□□□ -1.07
NIF3L1-204ENST00000409357 TRGV9Q99603 122 aa8.4□□□□□ -1.07
NIF3L1-204ENST00000409357 SPANXDQ9BXN6 97 aa8.4□□□□□ -1.07
NIF3L1-204ENST00000409357 DKK2Q9UBU2 259 aa8.4□□□□□ -1.07
NIF3L1-204ENST00000409357 DYSFO75923 2080 aa8.4□□□□□ -1.07
NIF3L1-204ENST00000409357 ZFHX3Q15911 3703 aa8.39□□□□□ -1.07
NIF3L1-204ENST00000409357 PRR14LQ5THK1 2151 aa8.39□□□□□ -1.07
NIF3L1-204ENST00000409357 A0A087WX48 190 aa8.39□□□□□ -1.07
NIF3L1-204ENST00000409357 A0A096LPE4 126 aa8.39□□□□□ -1.07
NIF3L1-204ENST00000409357 A0A1W2PPZ6 126 aa8.39□□□□□ -1.07
NIF3L1-204ENST00000409357 MBD3L4A6NDZ8 208 aaPredicted RBP8.39□□□□□ -1.07
NIF3L1-204ENST00000409357 MBD3L3A6NE82 208 aaPredicted RBP8.39□□□□□ -1.07
NIF3L1-204ENST00000409357 MBD3L5A6NJ08 208 aaPredicted RBP8.39□□□□□ -1.07
NIF3L1-204ENST00000409357 HOXA3O43365 443 aaPredicted RBP8.39□□□□□ -1.07
NIF3L1-204ENST00000409357 FAM106CPP0CH98 169 aa8.39□□□□□ -1.07
NIF3L1-204ENST00000409357 CFHR2P36980 270 aa8.39□□□□□ -1.07
NIF3L1-204ENST00000409357 UBE2D3P61077 147 aa8.39□□□□□ -1.07
NIF3L1-204ENST00000409357 UBE2D2P62837 147 aa8.39□□□□□ -1.07
NIF3L1-204ENST00000409357 MZT1Q08AG7 82 aa8.39□□□□□ -1.07
NIF3L1-204ENST00000409357 FAM106AQ4KMX7 169 aa8.39□□□□□ -1.07
NIF3L1-204ENST00000409357 RPL39P5Q59GN2 51 aa8.39□□□□□ -1.07
NIF3L1-204ENST00000409357 ASPHD1Q5U4P2 390 aa8.39□□□□□ -1.07
NIF3L1-204ENST00000409357 MORN3Q6PF18 240 aaPredicted RBP8.39□□□□□ -1.07
NIF3L1-204ENST00000409357 LYPD1Q8N2G4 141 aa8.39□□□□□ -1.07
NIF3L1-204ENST00000409357 MBD3L2Q8NHZ7 208 aaPredicted RBP8.39□□□□□ -1.07
NIF3L1-204ENST00000409357 TMEM126AQ9H061 195 aa8.39□□□□□ -1.07
NIF3L1-204ENST00000409357 Q9H3A6 140 aa8.39□□□□□ -1.07
NIF3L1-204ENST00000409357 NXT2Q9NPJ8 142 aaKnown RBP8.39□□□□□ -1.07
NIF3L1-204ENST00000409357 FLNAP21333 2647 aaKnown RBP8.39□□□□□ -1.07
NIF3L1-204ENST00000409357 TANC2Q9HCD6 1990 aa8.38□□□□□ -1.07
NIF3L1-204ENST00000409357 ROS1P08922 2347 aa8.38□□□□□ -1.07
NIF3L1-204ENST00000409357 PRSS29PA6NIE9 313 aa8.38□□□□□ -1.07
NIF3L1-204ENST00000409357 FABP5P3A8MUU1 101 aa8.38□□□□□ -1.07
NIF3L1-204ENST00000409357 DEFB108AA8MXU0 73 aa8.38□□□□□ -1.07
NIF3L1-204ENST00000409357 D6R8Y8 96 aa8.38□□□□□ -1.07
NIF3L1-204ENST00000409357 ARL3P36405 182 aa8.38□□□□□ -1.07
NIF3L1-204ENST00000409357 SRSF2Q01130 221 aaKnown RBP8.38□□□□□ -1.07
NIF3L1-204ENST00000409357 FHL3Q13643 280 aa8.38□□□□□ -1.07
NIF3L1-204ENST00000409357 MRPL23Q16540 153 aaKnown RBP8.38□□□□□ -1.07
NIF3L1-204ENST00000409357 CIARTQ8N365 385 aaPredicted RBP8.38□□□□□ -1.07
NIF3L1-204ENST00000409357 RFESDQ8TAC1 157 aa8.38□□□□□ -1.07
NIF3L1-204ENST00000409357 SRSF12Q8WXF0 261 aaKnown RBP8.38□□□□□ -1.07
NIF3L1-204ENST00000409357 CARD19Q96LW7 228 aa8.38□□□□□ -1.07
NIF3L1-204ENST00000409357 MAP1LC3AQ9H492 121 aa8.38□□□□□ -1.07
NIF3L1-204ENST00000409357 LINC00574Q9H8X3 128 aa8.38□□□□□ -1.07
NIF3L1-204ENST00000409357 ACANP16112 2415 aa8.38□□□□□ -1.07
NIF3L1-204ENST00000409357 IL4P05112 153 aa8.37□□□□□ -1.07
NIF3L1-204ENST00000409357 ZNF134P52741 427 aa8.37□□□□□ -1.07
NIF3L1-204ENST00000409357 NDUFV3P56181 108 aaKnown RBP8.37□□□□□ -1.07
NIF3L1-204ENST00000409357 TM4SF20Q53R12 229 aa8.37□□□□□ -1.07
NIF3L1-204ENST00000409357 NRGNQ92686 78 aa8.37□□□□□ -1.07
NIF3L1-204ENST00000409357 NF1P21359 2839 aa8.37□□□□□ -1.07
NIF3L1-204ENST00000409357 FREM1Q5H8C1 2179 aa8.37□□□□□ -1.07
NIF3L1-204ENST00000409357 MRPL51Q4U2R6 128 aaKnown RBP8.37□□□□□ -1.07
NIF3L1-204ENST00000409357 AMTNQ6UX39 209 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms