RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 ZNF833PQ6ZTB9 187 aa14.15□□□□□ -0.14
SMPD4-202ENST00000409031 LY6G5BQ8NDX9 201 aa14.15□□□□□ -0.14
SMPD4-202ENST00000409031 SMIM2Q9BVW6 85 aa14.15□□□□□ -0.14
SMPD4-202ENST00000409031 PROK2Q9HC23 129 aa14.15□□□□□ -0.14
SMPD4-202ENST00000409031 USF3Q68DE3 2245 aa14.14□□□□□ -0.15
SMPD4-202ENST00000409031 ZNF134P52741 427 aa14.14□□□□□ -0.15
SMPD4-202ENST00000409031 KLRD1Q13241 179 aa14.14□□□□□ -0.15
SMPD4-202ENST00000409031 C17orf58Q2M2W7 97 aa14.14□□□□□ -0.15
SMPD4-202ENST00000409031 C15orf53Q8NAA6 179 aa14.14□□□□□ -0.15
SMPD4-202ENST00000409031 DTX2Q86UW9 622 aa14.14□□□□□ -0.15
SMPD4-202ENST00000409031 SMIM20Q8N5G0 67 aa14.14□□□□□ -0.15
SMPD4-202ENST00000409031 SPTBN2O15020 2390 aa14.14□□□□□ -0.15
SMPD4-202ENST00000409031 BUB1B-PAK6H3BSN5 160 aa14.14□□□□□ -0.15
SMPD4-202ENST00000409031 TP53TG1Q9Y2A0 90 aa14.14□□□□□ -0.15
SMPD4-202ENST00000409031 OOSP1A8MZH6 123 aa14.13□□□□□ -0.15
SMPD4-202ENST00000409031 NTN5Q8WTR8 489 aaPredicted RBP14.13□□□□□ -0.15
SMPD4-202ENST00000409031 COLQQ9Y215 455 aaPredicted RBP14.13□□□□□ -0.15
SMPD4-202ENST00000409031 DOPEY2Q9Y3R5 2298 aa14.13□□□□□ -0.15
SMPD4-202ENST00000409031 SRRM4A7MD48 611 aaKnown RBP14.13□□□□□ -0.15
SMPD4-202ENST00000409031 CRPP02741 224 aa14.13□□□□□ -0.15
SMPD4-202ENST00000409031 FXYD2P54710 66 aa14.13□□□□□ -0.15
SMPD4-202ENST00000409031 ERCC8Q13216 396 aa14.13□□□□□ -0.15
SMPD4-202ENST00000409031 IGHV3-11P01762 117 aa14.13□□□□□ -0.15
SMPD4-202ENST00000409031 CTRLP40313 264 aa14.13□□□□□ -0.15
SMPD4-202ENST00000409031 CRYBA4P53673 196 aa14.13□□□□□ -0.15
SMPD4-202ENST00000409031 GAGE2AQ6NT46 116 aa14.12□□□□□ -0.15
SMPD4-202ENST00000409031 H3BRN7 92 aa14.12□□□□□ -0.15
SMPD4-202ENST00000409031 TEN1Q86WV5 123 aa14.12□□□□□ -0.15
SMPD4-202ENST00000409031 SPXQ9BT56 116 aa14.12□□□□□ -0.15
SMPD4-202ENST00000409031 ZNRD1Q9P1U0 126 aa14.12□□□□□ -0.15
SMPD4-202ENST00000409031 ALPK3Q96L96 1907 aa14.11□□□□□ -0.15
SMPD4-202ENST00000409031 ANAPC1Q9H1A4 1944 aa14.11□□□□□ -0.15
SMPD4-202ENST00000409031 UTF1Q5T230 341 aa14.11□□□□□ -0.15
SMPD4-202ENST00000409031 Q6ZR03 302 aa14.11□□□□□ -0.15
SMPD4-202ENST00000409031 LINC01560Q8TB33 94 aa14.11□□□□□ -0.15
SMPD4-202ENST00000409031 RASL10AQ92737 203 aa14.11□□□□□ -0.15
SMPD4-202ENST00000409031 EFNA4P52798 201 aa14.11□□□□□ -0.15
SMPD4-202ENST00000409031 ZNF503-AS2A6NEH8 195 aa14.1□□□□□ -0.15
SMPD4-202ENST00000409031 SPATA12Q7Z6I5 190 aa14.1□□□□□ -0.15
SMPD4-202ENST00000409031 SRD5A1P18405 259 aa14.1□□□□□ -0.15
SMPD4-202ENST00000409031 ODF3L1Q8IXM7 274 aa14.1□□□□□ -0.15
SMPD4-202ENST00000409031 MDS2Q8NDY4 140 aa14.1□□□□□ -0.15
SMPD4-202ENST00000409031 LINC01587Q99440 93 aa14.1□□□□□ -0.15
SMPD4-202ENST00000409031 FOXI1Q12951 378 aa14.09□□□□□ -0.15
SMPD4-202ENST00000409031 SPTAN1Q13813 2472 aaKnown RBP14.09□□□□□ -0.15
SMPD4-202ENST00000409031 TMEM86BQ8N661 226 aa14.09□□□□□ -0.15
SMPD4-202ENST00000409031 YLPM1P49750 1951 aaKnown RBP14.09□□□□□ -0.15
SMPD4-202ENST00000409031 GATA4P43694 442 aa14.09□□□□□ -0.15
SMPD4-202ENST00000409031 C20orf78Q9BR46 151 aa14.09□□□□□ -0.15
SMPD4-202ENST00000409031 CADP27708 2225 aa14.09□□□□□ -0.15
SMPD4-202ENST00000409031 DEFB104AQ8WTQ1 72 aa14.09□□□□□ -0.15
SMPD4-202ENST00000409031 FGF23Q9GZV9 251 aaPredicted RBP14.09□□□□□ -0.15
SMPD4-202ENST00000409031 TRBV7-1A0A0A6YYK4 115 aa14.08□□□□□ -0.15
SMPD4-202ENST00000409031 PRSS29PA6NIE9 313 aa14.08□□□□□ -0.15
SMPD4-202ENST00000409031 IL17RELQ6ZVW7 336 aa14.08□□□□□ -0.16
SMPD4-202ENST00000409031 LINC00311Q8N616 119 aa14.08□□□□□ -0.16
SMPD4-202ENST00000409031 PLXNB3Q9ULL4 1909 aa14.08□□□□□ -0.16
SMPD4-202ENST00000409031 J3QQQ9 107 aa14.08□□□□□ -0.16
SMPD4-202ENST00000409031 K7EMI3 77 aa14.08□□□□□ -0.16
SMPD4-202ENST00000409031 CFC1BP0CG36 223 aa14.08□□□□□ -0.16
SMPD4-202ENST00000409031 CFC1P0CG37 223 aa14.08□□□□□ -0.16
SMPD4-202ENST00000409031 KRTAP27-1Q3LI81 207 aa14.08□□□□□ -0.16
SMPD4-202ENST00000409031 RNF138Q8WVD3 245 aa14.08□□□□□ -0.16
SMPD4-202ENST00000409031 ARHGAP21Q5T5U3 1957 aa14.07□□□□□ -0.16
SMPD4-202ENST00000409031 LINC00158P58513 81 aa14.07□□□□□ -0.16
SMPD4-202ENST00000409031 ANXA2RQ3ZCQ2 193 aa14.07□□□□□ -0.16
SMPD4-202ENST00000409031 LYNX1G3V0Z9 82 aa14.07□□□□□ -0.16
SMPD4-202ENST00000409031 LYNX1P0DP58 116 aa14.07□□□□□ -0.16
SMPD4-202ENST00000409031 MINOS1Q5TGZ0 78 aa14.07□□□□□ -0.16
SMPD4-202ENST00000409031 MORN5Q5VZ52 161 aa14.07□□□□□ -0.16
SMPD4-202ENST00000409031 MINOS1-NBL1R4GNA1 71 aa14.07□□□□□ -0.16
SMPD4-202ENST00000409031 LEPROTO15243 131 aa14.07□□□□□ -0.16
SMPD4-202ENST00000409031 GATD1Q8NB37 220 aa14.07□□□□□ -0.16
SMPD4-202ENST00000409031 GTSF1Q8WW33 167 aa14.07□□□□□ -0.16
SMPD4-202ENST00000409031 DNAJC30Q96LL9 226 aa14.07□□□□□ -0.16
SMPD4-202ENST00000409031 TCTEX1D4Q5JR98 221 aa14.06□□□□□ -0.16
SMPD4-202ENST00000409031 FAM167A-AS1Q96KT0 104 aa14.06□□□□□ -0.16
SMPD4-202ENST00000409031 IGHV3OR16-10A0A075B7F0 116 aa14.06□□□□□ -0.16
SMPD4-202ENST00000409031 ANKRD29Q8N6D5 301 aa14.06□□□□□ -0.16
SMPD4-202ENST00000409031 IGHG4P01861 327 aa14.06□□□□□ -0.16
SMPD4-202ENST00000409031 TRAV26-2A0A0B4J265 109 aa14.06□□□□□ -0.16
SMPD4-202ENST00000409031 ATP6V0E2Q8NHE4 81 aa14.06□□□□□ -0.16
SMPD4-202ENST00000409031 TRACP01848 142 aa14.05□□□□□ -0.16
SMPD4-202ENST00000409031 CARD19Q96LW7 228 aa14.05□□□□□ -0.16
SMPD4-202ENST00000409031 TRPT1Q86TN4 253 aaKnown RBP14.05□□□□□ -0.16
SMPD4-202ENST00000409031 TP53TG3Q9ULZ0 132 aa14.05□□□□□ -0.16
SMPD4-202ENST00000409031 A0A087WWL8 130 aa14.04□□□□□ -0.16
SMPD4-202ENST00000409031 TRAV41A0A0B4J266 112 aa14.04□□□□□ -0.16
SMPD4-202ENST00000409031 NOTCH3Q9UM47 2321 aa14.04□□□□□ -0.16
SMPD4-202ENST00000409031 PIMREGQ9BSJ6 248 aa14.04□□□□□ -0.16
SMPD4-202ENST00000409031 COL4A3Q01955 1670 aa14.04□□□□□ -0.16
SMPD4-202ENST00000409031 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.04□□□□□ -0.16
SMPD4-202ENST00000409031 IGHG3P01860 377 aa14.04□□□□□ -0.16
SMPD4-202ENST00000409031 PRIMA1Q86XR5 153 aa14.04□□□□□ -0.16
SMPD4-202ENST00000409031 Q8TCH9 128 aa14.04□□□□□ -0.16
SMPD4-202ENST00000409031 NDPQ00604 133 aa14.03□□□□□ -0.16
SMPD4-202ENST00000409031 CFAP161Q6P656 301 aa14.03□□□□□ -0.16
SMPD4-202ENST00000409031 SDHAF1A6NFY7 115 aa14.03□□□□□ -0.16
SMPD4-202ENST00000409031 ADARB2-AS1A8MUL3 147 aa14.03□□□□□ -0.16
SMPD4-202ENST00000409031 VMO1Q7Z5L0 202 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms