RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 TRBV20-1A0A075B6N2 111 aa9.75□□□□□ -0.85
SMCR8-201ENST00000406438 GTSF1LQ9H1H1 148 aa9.75□□□□□ -0.85
SMCR8-201ENST00000406438 PNRC2Q9NPJ4 139 aaKnown RBP9.75□□□□□ -0.85
SMCR8-201ENST00000406438 IGKV1-5P01602 117 aa9.75□□□□□ -0.85
SMCR8-201ENST00000406438 XCL2Q9UBD3 114 aa9.75□□□□□ -0.85
SMCR8-201ENST00000406438 PKIGQ9Y2B9 76 aa9.75□□□□□ -0.85
SMCR8-201ENST00000406438 IGKV1-16P04430 117 aa9.75□□□□□ -0.85
SMCR8-201ENST00000406438 SPINK8P0C7L1 97 aa9.75□□□□□ -0.85
SMCR8-201ENST00000406438 COL8A2P25067 703 aa9.75□□□□□ -0.85
SMCR8-201ENST00000406438 ARMS2P0C7Q2 107 aa9.75□□□□□ -0.85
SMCR8-201ENST00000406438 TMEM243Q9BU79 118 aa9.75□□□□□ -0.85
SMCR8-201ENST00000406438 LYPD3O95274 346 aa9.75□□□□□ -0.85
SMCR8-201ENST00000406438 LYPD2Q6UXB3 125 aa9.75□□□□□ -0.85
SMCR8-201ENST00000406438 MDS2Q8NDY4 140 aa9.75□□□□□ -0.85
SMCR8-201ENST00000406438 UBL5Q9BZL1 73 aa9.75□□□□□ -0.85
SMCR8-201ENST00000406438 IGKV1D-17A0A075B6S4 117 aa9.75□□□□□ -0.85
SMCR8-201ENST00000406438 ZC2HC1BQ5TFG8 222 aa9.75□□□□□ -0.85
SMCR8-201ENST00000406438 Q96MF0 132 aa9.75□□□□□ -0.85
SMCR8-201ENST00000406438 DKK4Q9UBT3 224 aa9.75□□□□□ -0.85
SMCR8-201ENST00000406438 PTPRBP23467 1997 aa9.75□□□□□ -0.85
SMCR8-201ENST00000406438 UBE2E1P51965 193 aa9.75□□□□□ -0.85
SMCR8-201ENST00000406438 NAA38Q9BRA0 125 aaKnown RBP9.75□□□□□ -0.85
SMCR8-201ENST00000406438 MCRIP2Q9BUT9 160 aaKnown RBP9.74□□□□□ -0.85
SMCR8-201ENST00000406438 TP53TG1Q9Y2A0 90 aa9.74□□□□□ -0.85
SMCR8-201ENST00000406438 PFN2P35080 140 aa9.74□□□□□ -0.85
SMCR8-201ENST00000406438 VWC2Q2TAL6 325 aa9.74□□□□□ -0.85
SMCR8-201ENST00000406438 MRPL52Q86TS9 123 aaKnown RBP9.74□□□□□ -0.85
SMCR8-201ENST00000406438 SHANK2-AS3Q9BTD1 123 aa9.74□□□□□ -0.85
SMCR8-201ENST00000406438 OVOL3O00110 214 aa9.74□□□□□ -0.85
SMCR8-201ENST00000406438 ANXA2RQ3ZCQ2 193 aa9.74□□□□□ -0.85
SMCR8-201ENST00000406438 IGFL4Q6B9Z1 124 aa9.74□□□□□ -0.85
SMCR8-201ENST00000406438 E7EQL1 145 aa9.74□□□□□ -0.85
SMCR8-201ENST00000406438 TMEM14BQ9NUH8 114 aa9.74□□□□□ -0.85
SMCR8-201ENST00000406438 C15orf62A8K5M9 175 aa9.74□□□□□ -0.85
SMCR8-201ENST00000406438 RNASE2P10153 161 aaKnown RBP9.74□□□□□ -0.85
SMCR8-201ENST00000406438 THSD7BQ9C0I4 1608 aa9.74□□□□□ -0.85
SMCR8-201ENST00000406438 IGHV3-16A0A0C4DH30 117 aa9.73□□□□□ -0.85
SMCR8-201ENST00000406438 EFNA2O43921 213 aa9.73□□□□□ -0.85
SMCR8-201ENST00000406438 LY6HO94772 140 aa9.73□□□□□ -0.85
SMCR8-201ENST00000406438 MUC6Q6W4X9 2439 aa9.73□□□□□ -0.85
SMCR8-201ENST00000406438 Q86TA4 180 aa9.73□□□□□ -0.85
SMCR8-201ENST00000406438 SRSF2Q01130 221 aaKnown RBP9.73□□□□□ -0.85
SMCR8-201ENST00000406438 KLF5Q13887 457 aaPredicted RBP9.73□□□□□ -0.85
SMCR8-201ENST00000406438 Q0VFX4 171 aa9.73□□□□□ -0.85
SMCR8-201ENST00000406438 A0A1W2PPI3 338 aa9.73□□□□□ -0.85
SMCR8-201ENST00000406438 CLPSP04118 112 aa9.73□□□□□ -0.85
SMCR8-201ENST00000406438 PFN1P07737 140 aaKnown RBP9.73□□□□□ -0.85
SMCR8-201ENST00000406438 FAM110DQ8TAY7 271 aaPredicted RBP9.73□□□□□ -0.85
SMCR8-201ENST00000406438 CDKN1BP46527 198 aa9.72□□□□□ -0.85
SMCR8-201ENST00000406438 RUSC1-AS1Q66K80 236 aa9.72□□□□□ -0.85
SMCR8-201ENST00000406438 SP5Q6BEB4 398 aaPredicted RBP9.72□□□□□ -0.85
SMCR8-201ENST00000406438 FOXG1P55316 489 aaPredicted RBP9.72□□□□□ -0.85
SMCR8-201ENST00000406438 UBE2V1Q13404 147 aa9.72□□□□□ -0.85
SMCR8-201ENST00000406438 ADAMTSL5Q6ZMM2 481 aa9.72□□□□□ -0.85
SMCR8-201ENST00000406438 TMEM256Q8N2U0 113 aa9.72□□□□□ -0.85
SMCR8-201ENST00000406438 RAI1Q7Z5J4 1906 aaPredicted RBP9.72□□□□□ -0.85
SMCR8-201ENST00000406438 GAS1P54826 345 aa9.72□□□□□ -0.85
SMCR8-201ENST00000406438 TCTEX1D4Q5JR98 221 aa9.72□□□□□ -0.85
SMCR8-201ENST00000406438 MRAPQ8TCY5 172 aa9.72□□□□□ -0.85
SMCR8-201ENST00000406438 C8orf49Q96NF6 230 aa9.72□□□□□ -0.85
SMCR8-201ENST00000406438 TAL2Q16559 108 aa9.72□□□□□ -0.85
SMCR8-201ENST00000406438 COLCA2A8K830 154 aa9.72□□□□□ -0.85
SMCR8-201ENST00000406438 ATP6V0E1O15342 81 aa9.72□□□□□ -0.85
SMCR8-201ENST00000406438 Q6ZS49 121 aa9.72□□□□□ -0.85
SMCR8-201ENST00000406438 GAGE12JA6NER3 117 aa9.72□□□□□ -0.85
SMCR8-201ENST00000406438 GAGE1Q13065 139 aa9.72□□□□□ -0.85
SMCR8-201ENST00000406438 GAGE4Q13068 117 aa9.72□□□□□ -0.85
SMCR8-201ENST00000406438 GAGE5Q13069 117 aa9.72□□□□□ -0.85
SMCR8-201ENST00000406438 PRSS46E5RG02 174 aa9.71□□□□□ -0.85
SMCR8-201ENST00000406438 C3orf79P0CE67 100 aa9.71□□□□□ -0.85
SMCR8-201ENST00000406438 SCRT2Q9NQ03 307 aa9.71□□□□□ -0.85
SMCR8-201ENST00000406438 NEUROG3Q9Y4Z2 214 aa9.71□□□□□ -0.85
SMCR8-201ENST00000406438 TRAV13-2A0A0B4J235 113 aa9.71□□□□□ -0.85
SMCR8-201ENST00000406438 MPV17L2Q567V2 206 aa9.71□□□□□ -0.85
SMCR8-201ENST00000406438 CFHR2P36980 270 aa9.71□□□□□ -0.86
SMCR8-201ENST00000406438 C9orf153Q5TBE3 101 aa9.71□□□□□ -0.86
SMCR8-201ENST00000406438 IGHV1-69DA0A0B4J2H0 117 aa9.71□□□□□ -0.86
SMCR8-201ENST00000406438 IGHV1-69P01742 117 aa9.71□□□□□ -0.86
SMCR8-201ENST00000406438 ANGP03950 147 aaKnown RBP9.71□□□□□ -0.86
SMCR8-201ENST00000406438 UBE2BP63146 152 aa9.71□□□□□ -0.86
SMCR8-201ENST00000406438 TCF15Q12870 199 aa9.71□□□□□ -0.86
SMCR8-201ENST00000406438 PRR31Q5SQ13 230 aa9.71□□□□□ -0.86
SMCR8-201ENST00000406438 Q6ZS92 163 aa9.7□□□□□ -0.86
SMCR8-201ENST00000406438 C8orf86Q6ZUL3 223 aa9.7□□□□□ -0.86
SMCR8-201ENST00000406438 HS3ST6Q96QI5 342 aa9.7□□□□□ -0.86
SMCR8-201ENST00000406438 SPANXDQ9BXN6 97 aa9.7□□□□□ -0.86
SMCR8-201ENST00000406438 KLK9Q9UKQ9 250 aa9.7□□□□□ -0.86
SMCR8-201ENST00000406438 J3QLI3 93 aa9.7□□□□□ -0.86
SMCR8-201ENST00000406438 EGR2P11161 476 aaPredicted RBP9.7□□□□□ -0.86
SMCR8-201ENST00000406438 HGFACQ04756 655 aa9.7□□□□□ -0.86
SMCR8-201ENST00000406438 MST1LQ2TV78 715 aa9.7□□□□□ -0.86
SMCR8-201ENST00000406438 MESP1Q9BRJ9 268 aa9.7□□□□□ -0.86
SMCR8-201ENST00000406438 IGF2BP2-AS1Q96M15 143 aa9.7□□□□□ -0.86
SMCR8-201ENST00000406438 IGHG4P01861 327 aa9.69□□□□□ -0.86
SMCR8-201ENST00000406438 IGHV2-70DA0A0C4DH43 119 aa9.69□□□□□ -0.86
SMCR8-201ENST00000406438 SLAQ13239 276 aa9.69□□□□□ -0.86
SMCR8-201ENST00000406438 STPG4Q8N801 248 aa9.69□□□□□ -0.86
SMCR8-201ENST00000406438 PAX9P55771 341 aa9.69□□□□□ -0.86
SMCR8-201ENST00000406438 HLA-DRB4P13762 266 aa9.69□□□□□ -0.86
SMCR8-201ENST00000406438 MST1P26927 711 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms