RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 ATAD5Q96QE3 1844 aa2.7□□□□□ -1.98
HMGB1P13-201ENST00000406019 MYH1P12882 1939 aa2.7□□□□□ -1.98
HMGB1P13-201ENST00000406019 ALPK3Q96L96 1907 aa2.7□□□□□ -1.98
HMGB1P13-201ENST00000406019 DOCK6Q96HP0 2047 aa2.7□□□□□ -1.98
HMGB1P13-201ENST00000406019 ABCC2Q92887 1545 aa2.7□□□□□ -1.98
HMGB1P13-201ENST00000406019 TRBV20OR9-2A0A075B6H5 130 aa2.7□□□□□ -1.98
HMGB1P13-201ENST00000406019 TRAV12-2A0A075B6T6 113 aa2.7□□□□□ -1.98
HMGB1P13-201ENST00000406019 C3orf85A0A1B0GTC6 90 aa2.7□□□□□ -1.98
HMGB1P13-201ENST00000406019 TPT1P13693 172 aaKnown RBP2.7□□□□□ -1.98
HMGB1P13-201ENST00000406019 TAS2R45P59539 299 aa2.7□□□□□ -1.98
HMGB1P13-201ENST00000406019 Q6ZQT7 251 aa2.7□□□□□ -1.98
HMGB1P13-201ENST00000406019 LCA10Q71F78 164 aa2.7□□□□□ -1.98
HMGB1P13-201ENST00000406019 ATP6V0E2Q8NHE4 81 aa2.7□□□□□ -1.98
HMGB1P13-201ENST00000406019 MRPL30Q8TCC3 161 aaKnown RBP2.7□□□□□ -1.98
HMGB1P13-201ENST00000406019 C10orf105Q8TEF2 133 aa2.7□□□□□ -1.98
HMGB1P13-201ENST00000406019 MUCL1Q96DR8 90 aa2.7□□□□□ -1.98
HMGB1P13-201ENST00000406019 RMI2Q96E14 147 aa2.7□□□□□ -1.98
HMGB1P13-201ENST00000406019 S100A16Q96FQ6 103 aaKnown RBP2.7□□□□□ -1.98
HMGB1P13-201ENST00000406019 IMUPQ9GZP8 106 aa2.7□□□□□ -1.98
HMGB1P13-201ENST00000406019 AK3Q9UIJ7 227 aa2.7□□□□□ -1.98
HMGB1P13-201ENST00000406019 PHLDA3Q9Y5J5 127 aa2.7□□□□□ -1.98
HMGB1P13-201ENST00000406019 LAMC1P11047 1609 aa2.7□□□□□ -1.98
HMGB1P13-201ENST00000406019 PRR14LQ5THK1 2151 aa2.7□□□□□ -1.98
HMGB1P13-201ENST00000406019 ABCA8O94911 1581 aa2.7□□□□□ -1.98
HMGB1P13-201ENST00000406019 GLI2P10070 1586 aa2.7□□□□□ -1.98
HMGB1P13-201ENST00000406019 MYH6P13533 1939 aa2.7□□□□□ -1.98
HMGB1P13-201ENST00000406019 CEP170Q5SW79 1584 aa2.7□□□□□ -1.98
HMGB1P13-201ENST00000406019 DENND4CQ5VZ89 1909 aa2.7□□□□□ -1.98
HMGB1P13-201ENST00000406019 LAMC3Q9Y6N6 1575 aa2.7□□□□□ -1.98
HMGB1P13-201ENST00000406019 IGKV1-9A0A0C4DH69 117 aa2.69□□□□□ -1.98
HMGB1P13-201ENST00000406019 MUC21A0A140T8X8 626 aa2.69□□□□□ -1.98
HMGB1P13-201ENST00000406019 H3BMG7 143 aa2.69□□□□□ -1.98
HMGB1P13-201ENST00000406019 BUB1B-PAK6H3BSN5 160 aa2.69□□□□□ -1.98
HMGB1P13-201ENST00000406019 OR1I1O60431 355 aa2.69□□□□□ -1.98
HMGB1P13-201ENST00000406019 IGLV3-27P01718 113 aa2.69□□□□□ -1.98
HMGB1P13-201ENST00000406019 C1QAP02745 245 aa2.69□□□□□ -1.98
HMGB1P13-201ENST00000406019 LINC00032P0C843 101 aa2.69□□□□□ -1.98
HMGB1P13-201ENST00000406019 POLR2JP52435 117 aaKnown RBP2.69□□□□□ -1.98
HMGB1P13-201ENST00000406019 SS18Q15532 418 aa2.69□□□□□ -1.98
HMGB1P13-201ENST00000406019 HMGN3Q15651 99 aa2.69□□□□□ -1.98
HMGB1P13-201ENST00000406019 LGALS9BQ3B8N2 356 aa2.69□□□□□ -1.98
HMGB1P13-201ENST00000406019 SPATA45Q537H7 98 aa2.69□□□□□ -1.98
HMGB1P13-201ENST00000406019 Q56UQ5 140 aa2.69□□□□□ -1.98
HMGB1P13-201ENST00000406019 LGALS9CQ6DKI2 356 aa2.69□□□□□ -1.98
HMGB1P13-201ENST00000406019 IGFL1Q6UW32 110 aa2.69□□□□□ -1.98
HMGB1P13-201ENST00000406019 TEN1Q86WV5 123 aa2.69□□□□□ -1.98
HMGB1P13-201ENST00000406019 H1FXQ92522 213 aaKnown RBP2.69□□□□□ -1.98
HMGB1P13-201ENST00000406019 POP5Q969H6 163 aaKnown RBP2.69□□□□□ -1.98
HMGB1P13-201ENST00000406019 PRELID3AQ96N28 172 aa2.69□□□□□ -1.98
HMGB1P13-201ENST00000406019 EIF5A2Q9GZV4 153 aaKnown RBP2.69□□□□□ -1.98
HMGB1P13-201ENST00000406019 ST20Q9HBF5 79 aa2.69□□□□□ -1.98
HMGB1P13-201ENST00000406019 NDUFB11Q9NX14 153 aa2.69□□□□□ -1.98
HMGB1P13-201ENST00000406019 OR5V1Q9UGF6 321 aa2.69□□□□□ -1.98
HMGB1P13-201ENST00000406019 DNAJC15Q9Y5T4 150 aa2.69□□□□□ -1.98
HMGB1P13-201ENST00000406019 SPCS1Q9Y6A9 102 aa2.69□□□□□ -1.98
HMGB1P13-201ENST00000406019 U3KQK5 164 aa2.69□□□□□ -1.98
HMGB1P13-201ENST00000406019 PLXNC1O60486 1568 aa2.69□□□□□ -1.98
HMGB1P13-201ENST00000406019 ROBO1Q9Y6N7 1651 aa2.69□□□□□ -1.98
HMGB1P13-201ENST00000406019 STRCQ7RTU9 1775 aa2.69□□□□□ -1.98
HMGB1P13-201ENST00000406019 DSCAML1Q8TD84 2053 aa2.69□□□□□ -1.98
HMGB1P13-201ENST00000406019 SEC16AO15027 2179 aa2.68□□□□□ -1.98
HMGB1P13-201ENST00000406019 ABCC6O95255 1503 aa2.68□□□□□ -1.98
HMGB1P13-201ENST00000406019 RNF17Q9BXT8 1623 aaKnown RBP2.68□□□□□ -1.98
HMGB1P13-201ENST00000406019 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.68□□□□□ -1.98
HMGB1P13-201ENST00000406019 TRAV9-1A0A075B6T8 112 aa2.68□□□□□ -1.98
HMGB1P13-201ENST00000406019 MCRIP1C9JLW8 97 aa2.68□□□□□ -1.98
HMGB1P13-201ENST00000406019 F8W1H4 67 aa2.68□□□□□ -1.98
HMGB1P13-201ENST00000406019 H3BRM9 83 aa2.68□□□□□ -1.98
HMGB1P13-201ENST00000406019 H3BT86 120 aa2.68□□□□□ -1.98
HMGB1P13-201ENST00000406019 GNGT2O14610 69 aa2.68□□□□□ -1.98
HMGB1P13-201ENST00000406019 PLA2G10O15496 165 aa2.68□□□□□ -1.98
HMGB1P13-201ENST00000406019 SYNGR2O43760 224 aa2.68□□□□□ -1.98
HMGB1P13-201ENST00000406019 TCL1BO95988 128 aa2.68□□□□□ -1.98
HMGB1P13-201ENST00000406019 SOD1P00441 154 aa2.68□□□□□ -1.98
HMGB1P13-201ENST00000406019 IGHV3-53P01767 116 aa2.68□□□□□ -1.98
HMGB1P13-201ENST00000406019 TRACP01848 142 aa2.68□□□□□ -1.98
HMGB1P13-201ENST00000406019 RBP4P02753 201 aa2.68□□□□□ -1.98
HMGB1P13-201ENST00000406019 SFTA3P0C7M3 94 aa2.68□□□□□ -1.98
HMGB1P13-201ENST00000406019 HLA-DRB4P13762 266 aa2.68□□□□□ -1.98
HMGB1P13-201ENST00000406019 CBLN1P23435 193 aa2.68□□□□□ -1.98
HMGB1P13-201ENST00000406019 WFDC2Q14508 124 aa2.68□□□□□ -1.98
HMGB1P13-201ENST00000406019 TMEM91Q6ZNR0 172 aa2.68□□□□□ -1.98
HMGB1P13-201ENST00000406019 BPIFA4PQ86YQ2 179 aa2.68□□□□□ -1.98
HMGB1P13-201ENST00000406019 GPHB5Q86YW7 130 aa2.68□□□□□ -1.98
HMGB1P13-201ENST00000406019 Q8N2B8 174 aa2.68□□□□□ -1.98
HMGB1P13-201ENST00000406019 OR10AG1Q8NH19 301 aa2.68□□□□□ -1.98
HMGB1P13-201ENST00000406019 VSTM2AQ8TAG5 236 aa2.68□□□□□ -1.98
HMGB1P13-201ENST00000406019 WFDC5Q8TCV5 224 aa2.68□□□□□ -1.98
HMGB1P13-201ENST00000406019 NAA60Q9H7X0 242 aa2.68□□□□□ -1.98
HMGB1P13-201ENST00000406019 FIS1Q9Y3D6 152 aa2.68□□□□□ -1.98
HMGB1P13-201ENST00000406019 SERP1Q9Y6X1 66 aa2.68□□□□□ -1.98
HMGB1P13-201ENST00000406019 HLA-DRB4X5D2U9 266 aa2.68□□□□□ -1.98
HMGB1P13-201ENST00000406019 PLIN4Q96Q06 1357 aa2.68□□□□□ -1.98
HMGB1P13-201ENST00000406019 CFTRP13569 1480 aa2.68□□□□□ -1.98
HMGB1P13-201ENST00000406019 CDK12Q9NYV4 1490 aaPredicted RBP2.68□□□□□ -1.98
HMGB1P13-201ENST00000406019 SBF2Q86WG5 1849 aa2.68□□□□□ -1.98
HMGB1P13-201ENST00000406019 MARF1Q9Y4F3 1742 aaKnown RBP2.68□□□□□ -1.98
HMGB1P13-201ENST00000406019 KIF14Q15058 1648 aa2.68□□□□□ -1.98
HMGB1P13-201ENST00000406019 ADGRB1O14514 1584 aa2.67□□□□□ -1.98
HMGB1P13-201ENST00000406019 NCOA2Q15596 1464 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms