RNA–Protein interactions for RNA: ENST00000405240.5

RTN4-209, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,061 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-209ENST00000405240 ZNF580Q9UK33 172 aa2.96□□□□□ -1.94
RTN4-209ENST00000405240 HHLA3Q9XRX5 114 aa2.96□□□□□ -1.94
RTN4-209ENST00000405240 LENEPQ9Y5L5 61 aa2.96□□□□□ -1.94
RTN4-209ENST00000405240 ATP6V0E1O15342 81 aa2.96□□□□□ -1.94
RTN4-209ENST00000405240 FCER1GP30273 86 aa2.96□□□□□ -1.94
RTN4-209ENST00000405240 GPR183P32249 361 aa2.96□□□□□ -1.94
RTN4-209ENST00000405240 C15orf32Q32M92 178 aa2.96□□□□□ -1.94
RTN4-209ENST00000405240 ANKRD39Q53RE8 183 aa2.96□□□□□ -1.94
RTN4-209ENST00000405240 UFSP1Q6NVU6 142 aa2.96□□□□□ -1.94
RTN4-209ENST00000405240 Q6ZVH6 145 aa2.96□□□□□ -1.94
RTN4-209ENST00000405240 GPHB5Q86YW7 130 aa2.96□□□□□ -1.94
RTN4-209ENST00000405240 PRSS3P2Q8NHM4 247 aa2.96□□□□□ -1.94
RTN4-209ENST00000405240 GLMPQ8WWB7 406 aa2.96□□□□□ -1.94
RTN4-209ENST00000405240 AGPAT4-IT1Q9H0P7 198 aa2.96□□□□□ -1.94
RTN4-209ENST00000405240 ADGRG4Q8IZF6 3080 aa2.96□□□□□ -1.94
RTN4-209ENST00000405240 MUC21A0A0G2JKD1 596 aa2.95□□□□□ -1.94
RTN4-209ENST00000405240 MUC21A0A140T8X8 626 aa2.95□□□□□ -1.94
RTN4-209ENST00000405240 LINC01548A6NM66 108 aa2.95□□□□□ -1.94
RTN4-209ENST00000405240 NUDT3O95989 172 aa2.95□□□□□ -1.94
RTN4-209ENST00000405240 IGF1P05019 195 aa2.95□□□□□ -1.94
RTN4-209ENST00000405240 EVI2AP22794 236 aa2.95□□□□□ -1.94
RTN4-209ENST00000405240 SEC11AP67812 179 aa2.95□□□□□ -1.94
RTN4-209ENST00000405240 MUC21Q5SSG8 566 aa2.95□□□□□ -1.94
RTN4-209ENST00000405240 OR9G4Q8NGQ1 327 aa2.95□□□□□ -1.94
RTN4-209ENST00000405240 HIGD1BQ9P298 99 aa2.95□□□□□ -1.94
RTN4-209ENST00000405240 FAM223BA6NKX1 122 aa2.95□□□□□ -1.94
RTN4-209ENST00000405240 NCBP2LA6PVI3 153 aaKnown RBP2.95□□□□□ -1.94
RTN4-209ENST00000405240 GAS8-AS1O95177 125 aa2.95□□□□□ -1.94
RTN4-209ENST00000405240 IGHV3-23P01764 117 aa2.95□□□□□ -1.94
RTN4-209ENST00000405240 ERCC8Q13216 396 aa2.95□□□□□ -1.94
RTN4-209ENST00000405240 FAM223AQ8IWN6 122 aa2.95□□□□□ -1.94
RTN4-209ENST00000405240 Q8N8P6 123 aa2.95□□□□□ -1.94
RTN4-209ENST00000405240 Q8TAT8 98 aa2.95□□□□□ -1.94
RTN4-209ENST00000405240 MSRB1Q9NZV6 116 aa2.95□□□□□ -1.94
RTN4-209ENST00000405240 POLEQ07864 2286 aa2.95□□□□□ -1.94
RTN4-209ENST00000405240 TRBV7-9A0A0J9YWB2 115 aa2.95□□□□□ -1.94
RTN4-209ENST00000405240 HSBP1L1C9JCN9 74 aa2.95□□□□□ -1.94
RTN4-209ENST00000405240 RNF223E7ERA6 249 aa2.95□□□□□ -1.94
RTN4-209ENST00000405240 H3BRM9 83 aa2.95□□□□□ -1.94
RTN4-209ENST00000405240 H3BUA1 57 aa2.95□□□□□ -1.94
RTN4-209ENST00000405240 SMAD7O15105 426 aaKnown RBP2.95□□□□□ -1.94
RTN4-209ENST00000405240 NPFFO15130 113 aa2.95□□□□□ -1.94
RTN4-209ENST00000405240 CLEC3BP05452 202 aa2.95□□□□□ -1.94
RTN4-209ENST00000405240 CSN3P07498 182 aa2.95□□□□□ -1.94
RTN4-209ENST00000405240 MED14OSP0DP75 135 aa2.95□□□□□ -1.94
RTN4-209ENST00000405240 SAA4P35542 130 aa2.95□□□□□ -1.94
RTN4-209ENST00000405240 CDKN1BP46527 198 aa2.95□□□□□ -1.94
RTN4-209ENST00000405240 HES1Q14469 280 aa2.95□□□□□ -1.94
RTN4-209ENST00000405240 ODF1Q14990 250 aa2.95□□□□□ -1.94
RTN4-209ENST00000405240 EEF1AKMT3Q96AZ1 226 aa2.95□□□□□ -1.94
RTN4-209ENST00000405240 IFI27L1Q96BM0 104 aa2.95□□□□□ -1.94
RTN4-209ENST00000405240 MCRIP2Q9BUT9 160 aaKnown RBP2.95□□□□□ -1.94
RTN4-209ENST00000405240 PRORYQ9H606 182 aa2.95□□□□□ -1.94
RTN4-209ENST00000405240 NXT2Q9NPJ8 142 aaKnown RBP2.95□□□□□ -1.94
RTN4-209ENST00000405240 RAXQ9Y2V3 346 aa2.95□□□□□ -1.94
RTN4-209ENST00000405240 NXPH4O95158 308 aa2.94□□□□□ -1.94
RTN4-209ENST00000405240 GOSR1O95249 250 aa2.94□□□□□ -1.94
RTN4-209ENST00000405240 TNFRSF6BO95407 300 aa2.94□□□□□ -1.94
RTN4-209ENST00000405240 PPIFP30405 207 aaKnown RBP2.94□□□□□ -1.94
RTN4-209ENST00000405240 CACNG7P62955 275 aa2.94□□□□□ -1.94
RTN4-209ENST00000405240 CFHR3Q02985 330 aa2.94□□□□□ -1.94
RTN4-209ENST00000405240 TWIST1Q15672 202 aa2.94□□□□□ -1.94
RTN4-209ENST00000405240 TMEM97Q5BJF2 176 aa2.94□□□□□ -1.94
RTN4-209ENST00000405240 PRSS57Q6UWY2 283 aa2.94□□□□□ -1.94
RTN4-209ENST00000405240 RNASE8Q8TDE3 154 aaKnown RBP2.94□□□□□ -1.94
RTN4-209ENST00000405240 SMPXQ9UHP9 88 aa2.94□□□□□ -1.94
RTN4-209ENST00000405240 CSMD1Q96PZ7 3565 aa2.94□□□□□ -1.94
RTN4-209ENST00000405240 LRBAP50851 2863 aa2.94□□□□□ -1.94
RTN4-209ENST00000405240 CKS2P33552 79 aa2.94□□□□□ -1.94
RTN4-209ENST00000405240 IGFL4Q6B9Z1 124 aa2.94□□□□□ -1.94
RTN4-209ENST00000405240 C8orf86Q6ZUL3 223 aa2.94□□□□□ -1.94
RTN4-209ENST00000405240 OR4X2Q8NGF9 303 aa2.94□□□□□ -1.94
RTN4-209ENST00000405240 C20orf173Q96LM9 149 aa2.94□□□□□ -1.94
RTN4-209ENST00000405240 MAP1LC3AQ9H492 121 aa2.94□□□□□ -1.94
RTN4-209ENST00000405240 APC2O95996 2303 aa2.94□□□□□ -1.94
RTN4-209ENST00000405240 LINC01619G3V211 115 aa2.94□□□□□ -1.94
RTN4-209ENST00000405240 SMKR1H3BMG3 65 aa2.94□□□□□ -1.94
RTN4-209ENST00000405240 SRSF1Q07955 248 aaKnown RBP eCLIP2.94□□□□□ -1.946e-8■■□□□ 14
RTN4-209ENST00000405240 HSD52Q0P140 79 aa2.94□□□□□ -1.94
RTN4-209ENST00000405240 RNF182Q8N6D2 247 aa2.94□□□□□ -1.94
RTN4-209ENST00000405240 CBY1Q9Y3M2 126 aa2.94□□□□□ -1.94
RTN4-209ENST00000405240 TRAV12-1A0A0B4J245 112 aa2.93□□□□□ -1.94
RTN4-209ENST00000405240 TRAV8-6A0A0B4J262 113 aa2.93□□□□□ -1.94
RTN4-209ENST00000405240 C9orf118A6NHY6 69 aa2.93□□□□□ -1.94
RTN4-209ENST00000405240 G3V318 75 aa2.93□□□□□ -1.94
RTN4-209ENST00000405240 K7EMI3 77 aa2.93□□□□□ -1.94
RTN4-209ENST00000405240 PRB4P10163 310 aaPredicted RBP2.93□□□□□ -1.94
RTN4-209ENST00000405240 PRR9Q5T870 116 aa2.93□□□□□ -1.94
RTN4-209ENST00000405240 ZFAND2AQ8N6M9 145 aa2.93□□□□□ -1.94
RTN4-209ENST00000405240 PHLDA1Q8WV24 401 aaPredicted RBP2.93□□□□□ -1.94
RTN4-209ENST00000405240 MRAP2Q96G30 205 aa2.93□□□□□ -1.94
RTN4-209ENST00000405240 DKK2Q9UBU2 259 aa2.93□□□□□ -1.94
RTN4-209ENST00000405240 MOB4Q9Y3A3 225 aa2.93□□□□□ -1.94
RTN4-209ENST00000405240 TMSB15BA0A087X1C1 80 aa2.93□□□□□ -1.94
RTN4-209ENST00000405240 LOC389332A0A1B0GUA5 103 aa2.93□□□□□ -1.94
RTN4-209ENST00000405240 C7orf71A4D174 169 aa2.93□□□□□ -1.94
RTN4-209ENST00000405240 NDUFA4O00483 81 aa2.93□□□□□ -1.94
RTN4-209ENST00000405240 IGLV1-40P01703 118 aa2.93□□□□□ -1.94
RTN4-209ENST00000405240 RPL32P62910 135 aaKnown RBP2.93□□□□□ -1.94
RTN4-209ENST00000405240 CLEC19AQ6UXS0 136 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms