RNA–Protein interactions for RNA: ENST00000401921.5

HDAC9-201, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-201ENST00000401921 FAM120AOSQ5T036 256 aa6.05□□□□□ -1.44
HDAC9-201ENST00000401921 SLC25A34Q6PIV7 304 aa6.05□□□□□ -1.44
HDAC9-201ENST00000401921 ZNF414Q96IQ9 312 aa6.05□□□□□ -1.44
HDAC9-201ENST00000401921 BPESC1Q9GZL8 116 aa6.05□□□□□ -1.44
HDAC9-201ENST00000401921 ZNF492Q9P255 531 aa6.05□□□□□ -1.44
HDAC9-201ENST00000401921 HSPB8Q9UJY1 196 aa6.05□□□□□ -1.44
HDAC9-201ENST00000401921 FAM231BA6NCW3 169 aa6.04□□□□□ -1.44
HDAC9-201ENST00000401921 G3V318 75 aa6.04□□□□□ -1.44
HDAC9-201ENST00000401921 LY6EQ16553 131 aa6.04□□□□□ -1.44
HDAC9-201ENST00000401921 SIGLEC15Q6ZMC9 328 aa6.04□□□□□ -1.44
HDAC9-201ENST00000401921 GEMIN7Q9H840 131 aaKnown RBP6.04□□□□□ -1.44
HDAC9-201ENST00000401921 HIF1ANQ9NWT6 349 aa6.04□□□□□ -1.44
HDAC9-201ENST00000401921 TMEM14CQ9P0S9 112 aa6.04□□□□□ -1.44
HDAC9-201ENST00000401921 SORL1Q92673 2214 aa6.04□□□□□ -1.44
HDAC9-201ENST00000401921 IGHV1-24A0A0C4DH33 117 aa6.04□□□□□ -1.44
HDAC9-201ENST00000401921 ZFP36P26651 326 aaKnown RBP6.04□□□□□ -1.44
HDAC9-201ENST00000401921 HSD52Q0P140 79 aa6.04□□□□□ -1.44
HDAC9-201ENST00000401921 AMN1Q8IY45 258 aa6.04□□□□□ -1.44
HDAC9-201ENST00000401921 OR11H6Q8NGC7 330 aa6.04□□□□□ -1.44
HDAC9-201ENST00000401921 PRELID3AQ96N28 172 aa6.04□□□□□ -1.44
HDAC9-201ENST00000401921 C19orf71A6NCJ1 209 aa6.03□□□□□ -1.44
HDAC9-201ENST00000401921 D6R8Y8 96 aa6.03□□□□□ -1.44
HDAC9-201ENST00000401921 SMKR1H3BMG3 65 aa6.03□□□□□ -1.44
HDAC9-201ENST00000401921 SH2D1AO60880 128 aa6.03□□□□□ -1.44
HDAC9-201ENST00000401921 SAA4P35542 130 aa6.03□□□□□ -1.44
HDAC9-201ENST00000401921 UQCRFS1P47985 274 aa6.03□□□□□ -1.44
HDAC9-201ENST00000401921 ERCC8Q13216 396 aa6.03□□□□□ -1.44
HDAC9-201ENST00000401921 ZNF479Q96JC4 524 aa6.03□□□□□ -1.44
HDAC9-201ENST00000401921 FANCD2OSQ96PS1 177 aa6.03□□□□□ -1.44
HDAC9-201ENST00000401921 NAA38Q9BRA0 125 aaKnown RBP6.03□□□□□ -1.44
HDAC9-201ENST00000401921 COL12A1Q99715 3063 aa6.03□□□□□ -1.44
HDAC9-201ENST00000401921 USP9YO00507 2555 aaPredicted RBP6.03□□□□□ -1.44
HDAC9-201ENST00000401921 FBLL1A6NHQ2 334 aaKnown RBP6.03□□□□□ -1.44
HDAC9-201ENST00000401921 LY6LH3BQJ8 138 aa6.03□□□□□ -1.44
HDAC9-201ENST00000401921 SYS1-DBNDD2H3BUS1 97 aa6.03□□□□□ -1.44
HDAC9-201ENST00000401921 NCR2O95944 276 aa6.03□□□□□ -1.44
HDAC9-201ENST00000401921 CT83Q5H943 113 aa6.03□□□□□ -1.44
HDAC9-201ENST00000401921 RNF182Q8N6D2 247 aa6.03□□□□□ -1.44
HDAC9-201ENST00000401921 TMEM75Q8N9X5 138 aa6.03□□□□□ -1.44
HDAC9-201ENST00000401921 OR10AG1Q8NH19 301 aa6.03□□□□□ -1.44
HDAC9-201ENST00000401921 C18orf15Q96N68 181 aa6.03□□□□□ -1.44
HDAC9-201ENST00000401921 PRSS22Q9GZN4 317 aa6.03□□□□□ -1.44
HDAC9-201ENST00000401921 UFC1Q9Y3C8 167 aa6.03□□□□□ -1.44
HDAC9-201ENST00000401921 H3BUT2 72 aa6.03□□□□□ -1.44
HDAC9-201ENST00000401921 J3QR89 54 aa6.03□□□□□ -1.44
HDAC9-201ENST00000401921 ATP6V0E1O15342 81 aa6.03□□□□□ -1.44
HDAC9-201ENST00000401921 BRD3OSQ6XYD6 125 aa6.03□□□□□ -1.44
HDAC9-201ENST00000401921 CFHR4Q92496 578 aa6.03□□□□□ -1.44
HDAC9-201ENST00000401921 CHCHD1Q96BP2 118 aaKnown RBP6.03□□□□□ -1.44
HDAC9-201ENST00000401921 SRSF8Q9BRL6 282 aaKnown RBP6.03□□□□□ -1.44
HDAC9-201ENST00000401921 GFRA4Q9GZZ7 299 aa6.03□□□□□ -1.44
HDAC9-201ENST00000401921 SS18L2Q9UHA2 77 aa6.03□□□□□ -1.44
HDAC9-201ENST00000401921 A0A087X0K7 114 aa6.02□□□□□ -1.45
HDAC9-201ENST00000401921 A0A1B0GXF2 115 aa6.02□□□□□ -1.45
HDAC9-201ENST00000401921 IFI27P40305 119 aaPredicted RBP6.02□□□□□ -1.45
HDAC9-201ENST00000401921 LYPD1Q8N2G4 141 aa6.02□□□□□ -1.45
HDAC9-201ENST00000401921 LY6G5BQ8NDX9 201 aa6.02□□□□□ -1.45
HDAC9-201ENST00000401921 OR2K2Q8NGT1 345 aa6.02□□□□□ -1.45
HDAC9-201ENST00000401921 VGLL1Q99990 258 aa6.02□□□□□ -1.45
HDAC9-201ENST00000401921 COL25A1Q9BXS0 654 aaPredicted RBP6.02□□□□□ -1.45
HDAC9-201ENST00000401921 C7orf69Q9H7B7 122 aa6.02□□□□□ -1.45
HDAC9-201ENST00000401921 TSSC4Q9Y5U2 329 aaPredicted RBP6.02□□□□□ -1.45
HDAC9-201ENST00000401921 IGLV11-55A0A075B6I3 123 aa6.02□□□□□ -1.45
HDAC9-201ENST00000401921 KLF5Q13887 457 aaPredicted RBP6.02□□□□□ -1.45
HDAC9-201ENST00000401921 ST20Q9HBF5 79 aa6.02□□□□□ -1.45
HDAC9-201ENST00000401921 IGHV7-81A0A0B4J1V7 117 aa6.01□□□□□ -1.45
HDAC9-201ENST00000401921 GAGE12HA6NDE8 117 aa6.01□□□□□ -1.45
HDAC9-201ENST00000401921 SMIM17P0DL12 118 aa6.01□□□□□ -1.45
HDAC9-201ENST00000401921 FBXL19-AS1Q494R0 122 aa6.01□□□□□ -1.45
HDAC9-201ENST00000401921 MTURNQ8N3F0 131 aa6.01□□□□□ -1.45
HDAC9-201ENST00000401921 NPBQ8NG41 125 aa6.01□□□□□ -1.45
HDAC9-201ENST00000401921 NDUFA3O95167 84 aa6.01□□□□□ -1.45
HDAC9-201ENST00000401921 IGHV3-11P01762 117 aa6.01□□□□□ -1.45
HDAC9-201ENST00000401921 PRSS1P07477 247 aa6.01□□□□□ -1.45
HDAC9-201ENST00000401921 CTSGP08311 255 aa6.01□□□□□ -1.45
HDAC9-201ENST00000401921 HOXB4P17483 251 aaPredicted RBP6.01□□□□□ -1.45
HDAC9-201ENST00000401921 TMEM78Q5T7P6 136 aa6.01□□□□□ -1.45
HDAC9-201ENST00000401921 MINOS1Q5TGZ0 78 aa6.01□□□□□ -1.45
HDAC9-201ENST00000401921 ORMDL3Q8N138 153 aa6.01□□□□□ -1.45
HDAC9-201ENST00000401921 MRAP2Q96G30 205 aa6.01□□□□□ -1.45
HDAC9-201ENST00000401921 C16orf92Q96LL3 132 aa6.01□□□□□ -1.45
HDAC9-201ENST00000401921 METTL26Q96S19 204 aa6.01□□□□□ -1.45
HDAC9-201ENST00000401921 MINOS1-NBL1R4GNA1 71 aa6.01□□□□□ -1.45
HDAC9-201ENST00000401921 TEX48A0A1B0GUV7 120 aa6.01□□□□□ -1.45
HDAC9-201ENST00000401921 C2orf70A6NJV1 201 aa6.01□□□□□ -1.45
HDAC9-201ENST00000401921 IGLV2-11P01706 119 aa6.01□□□□□ -1.45
HDAC9-201ENST00000401921 GNLYP22749 145 aa6.01□□□□□ -1.45
HDAC9-201ENST00000401921 EVI2AP22794 236 aa6.01□□□□□ -1.45
HDAC9-201ENST00000401921 S100A4P26447 101 aaKnown RBP6.01□□□□□ -1.45
HDAC9-201ENST00000401921 EFNA4P52798 201 aa6.01□□□□□ -1.45
HDAC9-201ENST00000401921 RAB37Q96AX2 223 aa6.01□□□□□ -1.45
HDAC9-201ENST00000401921 PRR25Q96S07 402 aa6.01□□□□□ -1.45
HDAC9-201ENST00000401921 CSMD1Q96PZ7 3565 aa6.01□□□□□ -1.45
HDAC9-201ENST00000401921 FABP5P3A8MUU1 101 aa6□□□□□ -1.45
HDAC9-201ENST00000401921 K7EP34 96 aa6□□□□□ -1.45
HDAC9-201ENST00000401921 TRGV3P03979 118 aa6□□□□□ -1.45
HDAC9-201ENST00000401921 CRIP1P50238 77 aa6□□□□□ -1.45
HDAC9-201ENST00000401921 HERV-K104P63124 156 aa6□□□□□ -1.45
HDAC9-201ENST00000401921 CD300EQ496F6 205 aaPredicted RBP6□□□□□ -1.45
HDAC9-201ENST00000401921 Q6AWC8 147 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms