RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 DAZAP1Q96EP5 407 aaKnown RBP19.37■□□□□ 0.69
CPNE1-205ENST00000401607 GPR61Q9BZJ8 451 aa19.37■□□□□ 0.69
CPNE1-205ENST00000401607 CBLN1P23435 193 aa19.37■□□□□ 0.69
CPNE1-205ENST00000401607 CT83Q5H943 113 aa19.37■□□□□ 0.69
CPNE1-205ENST00000401607 C11orf44Q8N8P7 122 aa19.37■□□□□ 0.69
CPNE1-205ENST00000401607 MTORP42345 2549 aa19.37■□□□□ 0.69
CPNE1-205ENST00000401607 TSKUQ8WUA8 353 aa19.36■□□□□ 0.69
CPNE1-205ENST00000401607 DPF1Q92782 380 aa19.36■□□□□ 0.69
CPNE1-205ENST00000401607 AGPAT4-IT1Q9H0P7 198 aa19.36■□□□□ 0.69
CPNE1-205ENST00000401607 ADAMTSL5Q6ZMM2 481 aa19.35■□□□□ 0.69
CPNE1-205ENST00000401607 ZNF738Q8NE65 137 aa19.35■□□□□ 0.69
CPNE1-205ENST00000401607 DCANP1Q8TF63 244 aa19.34■□□□□ 0.69
CPNE1-205ENST00000401607 FRZBQ92765 325 aa19.34■□□□□ 0.69
CPNE1-205ENST00000401607 FRMD6-AS1P0C7T7 363 aa19.34■□□□□ 0.69
CPNE1-205ENST00000401607 C9orf47Q6ZRZ4 202 aa19.34■□□□□ 0.69
CPNE1-205ENST00000401607 OR4B1Q8NGF8 309 aa19.34■□□□□ 0.69
CPNE1-205ENST00000401607 NEU1Q99519 415 aa19.34■□□□□ 0.69
CPNE1-205ENST00000401607 CT45A10P0DMU9 189 aa19.33■□□□□ 0.68
CPNE1-205ENST00000401607 ACTL10Q5JWF8 245 aa19.33■□□□□ 0.68
CPNE1-205ENST00000401607 CITED2Q99967 270 aaPredicted RBP19.33■□□□□ 0.68
CPNE1-205ENST00000401607 IZUMO1RA6ND01 250 aa19.32■□□□□ 0.68
CPNE1-205ENST00000401607 HAX1O00165 279 aa19.32■□□□□ 0.68
CPNE1-205ENST00000401607 SPINK4O60575 86 aa19.32■□□□□ 0.68
CPNE1-205ENST00000401607 NUP35Q8NFH5 326 aa19.32■□□□□ 0.68
CPNE1-205ENST00000401607 NDFIP1Q9BT67 221 aa19.32■□□□□ 0.68
CPNE1-205ENST00000401607 ZNF80P51504 273 aaPredicted RBP19.32■□□□□ 0.68
CPNE1-205ENST00000401607 OR2D3Q8NGH3 330 aa19.32■□□□□ 0.68
CPNE1-205ENST00000401607 DLX4Q92988 240 aaPredicted RBP19.32■□□□□ 0.68
CPNE1-205ENST00000401607 MS4A6AQ9H2W1 248 aa19.32■□□□□ 0.68
CPNE1-205ENST00000401607 A8MWL6 223 aa19.31■□□□□ 0.68
CPNE1-205ENST00000401607 HIST1H2BKO60814 126 aa19.31■□□□□ 0.68
CPNE1-205ENST00000401607 HIST1H2BJP06899 126 aa19.31■□□□□ 0.68
CPNE1-205ENST00000401607 HIST1H2BOP23527 126 aa19.31■□□□□ 0.68
CPNE1-205ENST00000401607 HIST1H2BBP33778 126 aa19.31■□□□□ 0.68
CPNE1-205ENST00000401607 ZNF138P52744 262 aa19.31■□□□□ 0.68
CPNE1-205ENST00000401607 HIST1H2BDP58876 126 aa19.31■□□□□ 0.68
CPNE1-205ENST00000401607 HIST1H2BCP62807 126 aa19.31■□□□□ 0.68
CPNE1-205ENST00000401607 HIST2H2BEQ16778 126 aa19.31■□□□□ 0.68
CPNE1-205ENST00000401607 HIST2H2BFQ5QNW6 126 aaPredicted RBP19.31■□□□□ 0.68
CPNE1-205ENST00000401607 GTSF1Q8WW33 167 aa19.31■□□□□ 0.68
CPNE1-205ENST00000401607 HIST1H2BHQ93079 126 aa19.31■□□□□ 0.68
CPNE1-205ENST00000401607 RAX2Q96IS3 184 aa19.31■□□□□ 0.68
CPNE1-205ENST00000401607 HIST1H2BNQ99877 126 aa19.31■□□□□ 0.68
CPNE1-205ENST00000401607 HIST1H2BMQ99879 126 aa19.31■□□□□ 0.68
CPNE1-205ENST00000401607 NAT8BQ9UHF3 227 aa19.31■□□□□ 0.68
CPNE1-205ENST00000401607 RNF114Q9Y508 228 aa19.31■□□□□ 0.68
CPNE1-205ENST00000401607 A0A1W2PRX2 142 aa19.3■□□□□ 0.68
CPNE1-205ENST00000401607 HIGD1CA8MV81 97 aa19.3■□□□□ 0.68
CPNE1-205ENST00000401607 SH2D1AO60880 128 aa19.3■□□□□ 0.68
CPNE1-205ENST00000401607 TRGC1P0CF51 173 aa19.3■□□□□ 0.68
CPNE1-205ENST00000401607 ZNF705DP0CH99 300 aaPredicted RBP19.3■□□□□ 0.68
CPNE1-205ENST00000401607 ZNF705BP0CI00 300 aaPredicted RBP19.3■□□□□ 0.68
CPNE1-205ENST00000401607 DEFB1P60022 68 aa19.3■□□□□ 0.68
CPNE1-205ENST00000401607 RPL19P84098 196 aaKnown RBP19.3■□□□□ 0.68
CPNE1-205ENST00000401607 TMEM78Q5T7P6 136 aa19.3■□□□□ 0.68
CPNE1-205ENST00000401607 OR9G4Q8NGQ1 327 aa19.3■□□□□ 0.68
CPNE1-205ENST00000401607 OVOL1O14753 267 aa19.29■□□□□ 0.68
CPNE1-205ENST00000401607 TCF21O43680 179 aa19.29■□□□□ 0.68
CPNE1-205ENST00000401607 PROK1P58294 105 aa19.29■□□□□ 0.68
CPNE1-205ENST00000401607 SMUG1Q53HV7 270 aa19.29■□□□□ 0.68
CPNE1-205ENST00000401607 FAM162BQ5T6X4 162 aa19.29■□□□□ 0.68
CPNE1-205ENST00000401607 SAMD13Q5VXD3 122 aa19.29■□□□□ 0.68
CPNE1-205ENST00000401607 WFDC3Q8IUB2 231 aa19.29■□□□□ 0.68
CPNE1-205ENST00000401607 PPP1R14DQ9NXH3 145 aa19.29■□□□□ 0.68
CPNE1-205ENST00000401607 TSSC4Q9Y5U2 329 aaPredicted RBP19.29■□□□□ 0.68
CPNE1-205ENST00000401607 SRSF2Q01130 221 aaKnown RBP19.29■□□□□ 0.68
CPNE1-205ENST00000401607 FABP9Q0Z7S8 132 aa19.29■□□□□ 0.68
CPNE1-205ENST00000401607 FHL3Q13643 280 aa19.29■□□□□ 0.68
CPNE1-205ENST00000401607 GFRA4Q9GZZ7 299 aa19.29■□□□□ 0.68
CPNE1-205ENST00000401607 PEMTQ9UBM1 199 aa19.29■□□□□ 0.68
CPNE1-205ENST00000401607 M0QZ24 198 aa19.28■□□□□ 0.68
CPNE1-205ENST00000401607 MRPL54Q6P161 138 aaKnown RBP19.28■□□□□ 0.68
CPNE1-205ENST00000401607 TRAPPC1Q9Y5R8 145 aa19.28■□□□□ 0.68
CPNE1-205ENST00000401607 CRLF1O75462 422 aa19.27■□□□□ 0.68
CPNE1-205ENST00000401607 GZMBP10144 247 aa19.27■□□□□ 0.68
CPNE1-205ENST00000401607 K7EQG2 157 aa19.27■□□□□ 0.67
CPNE1-205ENST00000401607 ID1P41134 155 aa19.27■□□□□ 0.67
CPNE1-205ENST00000401607 TFPI2P48307 235 aa19.27■□□□□ 0.67
CPNE1-205ENST00000401607 NF1P21359 2839 aa19.26■□□□□ 0.67
CPNE1-205ENST00000401607 FAM231BA6NCW3 169 aa19.26■□□□□ 0.67
CPNE1-205ENST00000401607 F6UB75 175 aa19.26■□□□□ 0.67
CPNE1-205ENST00000401607 S100A6P06703 90 aa19.26■□□□□ 0.67
CPNE1-205ENST00000401607 SNRPEP62304 92 aaKnown RBP19.26■□□□□ 0.67
CPNE1-205ENST00000401607 C5orf52A6NGY3 159 aa19.25■□□□□ 0.67
CPNE1-205ENST00000401607 CSN3P07498 182 aa19.25■□□□□ 0.67
CPNE1-205ENST00000401607 OR8A1Q8NGG7 326 aa19.25■□□□□ 0.67
CPNE1-205ENST00000401607 OR10J6PQ8NGY7 276 aa19.25■□□□□ 0.67
CPNE1-205ENST00000401607 HIVEP1P15822 2718 aa19.25■□□□□ 0.67
CPNE1-205ENST00000401607 CCL24O00175 119 aa19.24■□□□□ 0.67
CPNE1-205ENST00000401607 LINC00477Q96M19 166 aa19.24■□□□□ 0.67
CPNE1-205ENST00000401607 GNB1LQ9BYB4 327 aa19.24■□□□□ 0.67
CPNE1-205ENST00000401607 SNURFLB1AK76 121 aa19.24■□□□□ 0.67
CPNE1-205ENST00000401607 TMEM136Q6ZRR5 245 aa19.24■□□□□ 0.67
CPNE1-205ENST00000401607 SAV1Q9H4B6 383 aaPredicted RBP19.24■□□□□ 0.67
CPNE1-205ENST00000401607 FOXA3P55318 350 aaPredicted RBP19.23■□□□□ 0.67
CPNE1-205ENST00000401607 HIST1H1AQ02539 215 aaPredicted RBP19.23■□□□□ 0.67
CPNE1-205ENST00000401607 RBPMS2Q6ZRY4 209 aaKnown RBP19.23■□□□□ 0.67
CPNE1-205ENST00000401607 PGLYRP4Q96LB8 373 aa19.23■□□□□ 0.67
CPNE1-205ENST00000401607 LENEPQ9Y5L5 61 aa19.23■□□□□ 0.67
CPNE1-205ENST00000401607 TMEM189A5PLL7 270 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms