RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 PRTN3P24158 256 aa9.91□□□□□ -0.82
PPP4R1-202ENST00000400555 MRPL51Q4U2R6 128 aaKnown RBP9.91□□□□□ -0.82
PPP4R1-202ENST00000400555 ZNF562Q6V9R5 426 aa9.91□□□□□ -0.82
PPP4R1-202ENST00000400555 RNASE8Q8TDE3 154 aaKnown RBP9.91□□□□□ -0.82
PPP4R1-202ENST00000400555 LRRK2Q5S007 2527 aa9.9□□□□□ -0.82
PPP4R1-202ENST00000400555 SRD5A1P18405 259 aa9.9□□□□□ -0.82
PPP4R1-202ENST00000400555 CT83Q5H943 113 aa9.9□□□□□ -0.82
PPP4R1-202ENST00000400555 ST20Q9HBF5 79 aa9.9□□□□□ -0.82
PPP4R1-202ENST00000400555 TMEM14CQ9P0S9 112 aa9.9□□□□□ -0.82
PPP4R1-202ENST00000400555 GAS8-AS1O95177 125 aa9.9□□□□□ -0.82
PPP4R1-202ENST00000400555 PRR25Q96S07 402 aa9.9□□□□□ -0.82
PPP4R1-202ENST00000400555 ATP6V0E1O15342 81 aa9.9□□□□□ -0.83
PPP4R1-202ENST00000400555 GOSR1O95249 250 aa9.9□□□□□ -0.83
PPP4R1-202ENST00000400555 PLP1P60201 277 aa9.9□□□□□ -0.83
PPP4R1-202ENST00000400555 FOXE3Q13461 319 aa9.9□□□□□ -0.83
PPP4R1-202ENST00000400555 PET117Q6UWS5 81 aa9.9□□□□□ -0.83
PPP4R1-202ENST00000400555 LCNL1Q6ZST4 164 aa9.9□□□□□ -0.83
PPP4R1-202ENST00000400555 IL17RELQ6ZVW7 336 aa9.9□□□□□ -0.83
PPP4R1-202ENST00000400555 GFRA4Q9GZZ7 299 aa9.9□□□□□ -0.83
PPP4R1-202ENST00000400555 TRAV26-2A0A0B4J265 109 aa9.89□□□□□ -0.83
PPP4R1-202ENST00000400555 K7EMI3 77 aa9.89□□□□□ -0.83
PPP4R1-202ENST00000400555 S100A4P26447 101 aaKnown RBP9.89□□□□□ -0.83
PPP4R1-202ENST00000400555 PSG9Q00887 426 aa9.89□□□□□ -0.83
PPP4R1-202ENST00000400555 UBE2V1Q13404 147 aa9.89□□□□□ -0.83
PPP4R1-202ENST00000400555 ANKRD39Q53RE8 183 aa9.89□□□□□ -0.83
PPP4R1-202ENST00000400555 SPANXN1Q5VSR9 72 aa9.89□□□□□ -0.83
PPP4R1-202ENST00000400555 C12orf54Q6X4T0 127 aa9.89□□□□□ -0.83
PPP4R1-202ENST00000400555 LEPP41159 167 aa9.89□□□□□ -0.83
PPP4R1-202ENST00000400555 SAPCD1Q5SSQ6 148 aa9.89□□□□□ -0.83
PPP4R1-202ENST00000400555 ZNF747Q9BV97 191 aa9.89□□□□□ -0.83
PPP4R1-202ENST00000400555 CTSGP08311 255 aa9.89□□□□□ -0.83
PPP4R1-202ENST00000400555 SAA4P35542 130 aa9.89□□□□□ -0.83
PPP4R1-202ENST00000400555 BPESC1Q9GZL8 116 aa9.89□□□□□ -0.83
PPP4R1-202ENST00000400555 ABCA12Q86UK0 2595 aa9.88□□□□□ -0.83
PPP4R1-202ENST00000400555 BMI1P35226 326 aa9.88□□□□□ -0.83
PPP4R1-202ENST00000400555 FAM104BQ5XKR9 115 aa9.88□□□□□ -0.83
PPP4R1-202ENST00000400555 SMIM15Q7Z3B0 74 aa9.88□□□□□ -0.83
PPP4R1-202ENST00000400555 C16orf92Q96LL3 132 aa9.88□□□□□ -0.83
PPP4R1-202ENST00000400555 CELSR1Q9NYQ6 3014 aa9.88□□□□□ -0.83
PPP4R1-202ENST00000400555 M0R381 172 aa9.88□□□□□ -0.83
PPP4R1-202ENST00000400555 GCSHP23434 173 aa9.88□□□□□ -0.83
PPP4R1-202ENST00000400555 TMEM160Q9NX00 188 aa9.88□□□□□ -0.83
PPP4R1-202ENST00000400555 DKK2Q9UBU2 259 aa9.88□□□□□ -0.83
PPP4R1-202ENST00000400555 ADORA2A-AS1P86434 159 aa9.88□□□□□ -0.83
PPP4R1-202ENST00000400555 TMEM78Q5T7P6 136 aa9.88□□□□□ -0.83
PPP4R1-202ENST00000400555 Q6ZQT7 251 aa9.88□□□□□ -0.83
PPP4R1-202ENST00000400555 IFI27L1Q96BM0 104 aa9.88□□□□□ -0.83
PPP4R1-202ENST00000400555 IGLV11-55A0A075B6I3 123 aa9.87□□□□□ -0.83
PPP4R1-202ENST00000400555 BVES-AS1Q5T3Y7 98 aa9.87□□□□□ -0.83
PPP4R1-202ENST00000400555 CFHR4Q92496 578 aa9.87□□□□□ -0.83
PPP4R1-202ENST00000400555 SMIM12Q96EX1 92 aa9.87□□□□□ -0.83
PPP4R1-202ENST00000400555 FABP5P3A8MUU1 101 aa9.87□□□□□ -0.83
PPP4R1-202ENST00000400555 H3BUT2 72 aa9.87□□□□□ -0.83
PPP4R1-202ENST00000400555 IGHV7-81A0A0B4J1V7 117 aa9.87□□□□□ -0.83
PPP4R1-202ENST00000400555 LY6LH3BQJ8 138 aa9.87□□□□□ -0.83
PPP4R1-202ENST00000400555 ORAOV1Q8WV07 137 aa9.87□□□□□ -0.83
PPP4R1-202ENST00000400555 FOXC2Q99958 501 aa9.87□□□□□ -0.83
PPP4R1-202ENST00000400555 MAP1LC3AQ9H492 121 aa9.87□□□□□ -0.83
PPP4R1-202ENST00000400555 GAGE1Q13065 139 aa9.86□□□□□ -0.83
PPP4R1-202ENST00000400555 PCP2Q8IVA1 136 aa9.86□□□□□ -0.83
PPP4R1-202ENST00000400555 TRAV8-6A0A0B4J262 113 aa9.86□□□□□ -0.83
PPP4R1-202ENST00000400555 HBDP02042 147 aa9.86□□□□□ -0.83
PPP4R1-202ENST00000400555 RNF5Q99942 180 aa9.86□□□□□ -0.83
PPP4R1-202ENST00000400555 NACAE9PAV3 2078 aa9.86□□□□□ -0.83
PPP4R1-202ENST00000400555 PKD1L2Q7Z442 2459 aa9.86□□□□□ -0.83
PPP4R1-202ENST00000400555 HRNRQ86YZ3 2850 aaPredicted RBP9.86□□□□□ -0.83
PPP4R1-202ENST00000400555 IGKV3-20P01619 116 aa9.86□□□□□ -0.83
PPP4R1-202ENST00000400555 MGPP08493 103 aa9.86□□□□□ -0.83
PPP4R1-202ENST00000400555 KLRB1Q12918 225 aa9.86□□□□□ -0.83
PPP4R1-202ENST00000400555 FAM231BA6NCW3 169 aa9.85□□□□□ -0.83
PPP4R1-202ENST00000400555 GAGE10A6NGK3 116 aa9.85□□□□□ -0.83
PPP4R1-202ENST00000400555 GTSCR1Q86UQ5 136 aa9.85□□□□□ -0.83
PPP4R1-202ENST00000400555 OR11H6Q8NGC7 330 aa9.85□□□□□ -0.83
PPP4R1-202ENST00000400555 METTL26Q96S19 204 aa9.85□□□□□ -0.83
PPP4R1-202ENST00000400555 H3BVH4 76 aa9.85□□□□□ -0.83
PPP4R1-202ENST00000400555 TRGV3P03979 118 aa9.85□□□□□ -0.83
PPP4R1-202ENST00000400555 PF4V1P10720 104 aa9.85□□□□□ -0.83
PPP4R1-202ENST00000400555 TMEM97Q5BJF2 176 aa9.85□□□□□ -0.83
PPP4R1-202ENST00000400555 NPIPB6E9PJ23 425 aa9.84□□□□□ -0.83
PPP4R1-202ENST00000400555 LYPD1Q8N2G4 141 aa9.84□□□□□ -0.83
PPP4R1-202ENST00000400555 A0A1W2PPR1 153 aa9.84□□□□□ -0.83
PPP4R1-202ENST00000400555 WI2-2373I1.2A0A1W2PRP0 233 aa9.84□□□□□ -0.83
PPP4R1-202ENST00000400555 A1L4Q6 167 aa9.84□□□□□ -0.83
PPP4R1-202ENST00000400555 MRPL52Q86TS9 123 aaKnown RBP9.84□□□□□ -0.83
PPP4R1-202ENST00000400555 K7EP13 123 aa9.84□□□□□ -0.83
PPP4R1-202ENST00000400555 HOXB4P17483 251 aaPredicted RBP9.84□□□□□ -0.83
PPP4R1-202ENST00000400555 SMAD5-AS1Q9Y6J3 95 aa9.84□□□□□ -0.83
PPP4R1-202ENST00000400555 Q6AWC8 147 aa9.83□□□□□ -0.84
PPP4R1-202ENST00000400555 NAV2Q8IVL1 2488 aa9.83□□□□□ -0.84
PPP4R1-202ENST00000400555 HIST1H1AQ02539 215 aaPredicted RBP9.83□□□□□ -0.84
PPP4R1-202ENST00000400555 SCGB2A2Q13296 93 aa9.83□□□□□ -0.84
PPP4R1-202ENST00000400555 SCRT2Q9NQ03 307 aa9.83□□□□□ -0.84
PPP4R1-202ENST00000400555 M0R1W7 72 aa9.83□□□□□ -0.84
PPP4R1-202ENST00000400555 TAX1BP3O14907 124 aa9.83□□□□□ -0.84
PPP4R1-202ENST00000400555 NDUFA3O95167 84 aa9.83□□□□□ -0.84
PPP4R1-202ENST00000400555 TMEM158Q8WZ71 300 aa9.83□□□□□ -0.84
PPP4R1-202ENST00000400555 TRAV40A0A0B4J280 105 aa9.82□□□□□ -0.84
PPP4R1-202ENST00000400555 ATP5G2Q06055 141 aa9.82□□□□□ -0.84
PPP4R1-202ENST00000400555 Q8N9W7 124 aa9.82□□□□□ -0.84
PPP4R1-202ENST00000400555 AGPAT4-IT1Q9H0P7 198 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms