RNA–Protein interactions for RNA: ENST00000399848.7

LDLRAD4-203, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD4, Length 8,633 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-203ENST00000399848 NOTCH2Q04721 2471 aa10.89□□□□□ -0.67
LDLRAD4-203ENST00000399848 COL4A5P29400 1685 aa10.89□□□□□ -0.67
LDLRAD4-203ENST00000399848 RNF223E7ERA6 249 aa10.89□□□□□ -0.67
LDLRAD4-203ENST00000399848 ZNF664Q8N3J9 261 aa10.89□□□□□ -0.67
LDLRAD4-203ENST00000399848 RHPN1-AS1Q9BWJ2 59 aa10.89□□□□□ -0.67
LDLRAD4-203ENST00000399848 ZFYVE26Q68DK2 2539 aa10.89□□□□□ -0.67
LDLRAD4-203ENST00000399848 PMVKQ15126 192 aa10.89□□□□□ -0.67
LDLRAD4-203ENST00000399848 SHANK2-AS3Q9BTD1 123 aa10.89□□□□□ -0.67
LDLRAD4-203ENST00000399848 MMP23AO75900 390 aa10.89□□□□□ -0.67
LDLRAD4-203ENST00000399848 TP53TG1Q9Y2A0 90 aa10.89□□□□□ -0.67
LDLRAD4-203ENST00000399848 ARHGAP32A7KAX9 2087 aa10.88□□□□□ -0.67
LDLRAD4-203ENST00000399848 FLVCR1-AS1Q8TAF5 88 aa10.88□□□□□ -0.67
LDLRAD4-203ENST00000399848 LINC00473A8K010 186 aa10.88□□□□□ -0.67
LDLRAD4-203ENST00000399848 PRRC2AP48634 2157 aaKnown RBP10.88□□□□□ -0.67
LDLRAD4-203ENST00000399848 A8MWP6 167 aa10.88□□□□□ -0.67
LDLRAD4-203ENST00000399848 PRSS46E5RG02 174 aa10.88□□□□□ -0.67
LDLRAD4-203ENST00000399848 DEFB104AQ8WTQ1 72 aa10.88□□□□□ -0.67
LDLRAD4-203ENST00000399848 UBE2E2Q96LR5 201 aa10.88□□□□□ -0.67
LDLRAD4-203ENST00000399848 C9orf118A6NHY6 69 aa10.88□□□□□ -0.67
LDLRAD4-203ENST00000399848 C4orf48Q5BLP8 95 aa10.88□□□□□ -0.67
LDLRAD4-203ENST00000399848 SELENOKQ9Y6D0 94 aa10.88□□□□□ -0.67
LDLRAD4-203ENST00000399848 TEX48A0A1B0GUV7 120 aa10.88□□□□□ -0.67
LDLRAD4-203ENST00000399848 SRSF2Q01130 221 aaKnown RBP10.88□□□□□ -0.67
LDLRAD4-203ENST00000399848 Q6P435 159 aa10.87□□□□□ -0.67
LDLRAD4-203ENST00000399848 THAP8Q8NA92 274 aa10.87□□□□□ -0.67
LDLRAD4-203ENST00000399848 TRACP01848 142 aa10.87□□□□□ -0.67
LDLRAD4-203ENST00000399848 ARMS2P0C7Q2 107 aa10.87□□□□□ -0.67
LDLRAD4-203ENST00000399848 STPG4Q8N801 248 aa10.87□□□□□ -0.67
LDLRAD4-203ENST00000399848 PFN1P07737 140 aaKnown RBP10.87□□□□□ -0.67
LDLRAD4-203ENST00000399848 RNASE2P10153 161 aaKnown RBP10.87□□□□□ -0.67
LDLRAD4-203ENST00000399848 PRB4P10163 310 aaPredicted RBP10.87□□□□□ -0.67
LDLRAD4-203ENST00000399848 GAS1P54826 345 aa10.87□□□□□ -0.67
LDLRAD4-203ENST00000399848 PNRC2Q9NPJ4 139 aaKnown RBP10.87□□□□□ -0.67
LDLRAD4-203ENST00000399848 OR11H6Q8NGC7 330 aa10.87□□□□□ -0.67
LDLRAD4-203ENST00000399848 PINLYPA6NC86 204 aa10.87□□□□□ -0.67
LDLRAD4-203ENST00000399848 DEFB130BP0DP73 79 aa10.87□□□□□ -0.67
LDLRAD4-203ENST00000399848 DEFB130AP0DP74 79 aa10.87□□□□□ -0.67
LDLRAD4-203ENST00000399848 TCF15Q12870 199 aa10.87□□□□□ -0.67
LDLRAD4-203ENST00000399848 SLAQ13239 276 aa10.87□□□□□ -0.67
LDLRAD4-203ENST00000399848 ZNF492Q9P255 531 aa10.87□□□□□ -0.67
LDLRAD4-203ENST00000399848 PCDH15Q96QU1 1955 aa10.87□□□□□ -0.67
LDLRAD4-203ENST00000399848 IGHG3P01860 377 aa10.87□□□□□ -0.67
LDLRAD4-203ENST00000399848 GAFA1Q96PS6 74 aa10.87□□□□□ -0.67
LDLRAD4-203ENST00000399848 TRAV13-2A0A0B4J235 113 aa10.86□□□□□ -0.67
LDLRAD4-203ENST00000399848 HGFACQ04756 655 aa10.86□□□□□ -0.67
LDLRAD4-203ENST00000399848 MAJINQ3KP22 176 aa10.86□□□□□ -0.67
LDLRAD4-203ENST00000399848 C20orf144Q9BQM9 153 aa10.86□□□□□ -0.67
LDLRAD4-203ENST00000399848 TANC1Q9C0D5 1861 aa10.86□□□□□ -0.67
LDLRAD4-203ENST00000399848 Q8NFD4 153 aa10.86□□□□□ -0.67
LDLRAD4-203ENST00000399848 SAA4P35542 130 aa10.86□□□□□ -0.67
LDLRAD4-203ENST00000399848 CITED1Q99966 193 aa10.86□□□□□ -0.67
LDLRAD4-203ENST00000399848 TMEM14BQ9NUH8 114 aa10.86□□□□□ -0.67
LDLRAD4-203ENST00000399848 DAD1P61803 113 aa10.85□□□□□ -0.67
LDLRAD4-203ENST00000399848 NOTCH4Q99466 2003 aa10.85□□□□□ -0.67
LDLRAD4-203ENST00000399848 IGHV1-24A0A0C4DH33 117 aa10.85□□□□□ -0.67
LDLRAD4-203ENST00000399848 TCTEX1D4Q5JR98 221 aa10.85□□□□□ -0.67
LDLRAD4-203ENST00000399848 Q8N8P6 123 aa10.85□□□□□ -0.67
LDLRAD4-203ENST00000399848 NTN3O00634 580 aaPredicted RBP10.85□□□□□ -0.67
LDLRAD4-203ENST00000399848 BOD1L2Q8IYS8 172 aa10.84□□□□□ -0.67
LDLRAD4-203ENST00000399848 FGF6P10767 208 aa10.84□□□□□ -0.67
LDLRAD4-203ENST00000399848 BRD3OSQ6XYD6 125 aa10.84□□□□□ -0.67
LDLRAD4-203ENST00000399848 CFHR2P36980 270 aa10.84□□□□□ -0.67
LDLRAD4-203ENST00000399848 FAM104BQ5XKR9 115 aa10.84□□□□□ -0.67
LDLRAD4-203ENST00000399848 KIAA1549LQ6ZVL6 1849 aa10.84□□□□□ -0.67
LDLRAD4-203ENST00000399848 QRFPP83859 136 aa10.84□□□□□ -0.67
LDLRAD4-203ENST00000399848 C2orf66Q6UXQ4 117 aa10.84□□□□□ -0.67
LDLRAD4-203ENST00000399848 A0A0G2JNJ9 132 aa10.84□□□□□ -0.67
LDLRAD4-203ENST00000399848 IGKV1-16P04430 117 aa10.84□□□□□ -0.67
LDLRAD4-203ENST00000399848 Q9UFV3 132 aa10.84□□□□□ -0.67
LDLRAD4-203ENST00000399848 C18orf32Q8TCD1 76 aa10.83□□□□□ -0.68
LDLRAD4-203ENST00000399848 DKK1O94907 266 aa10.83□□□□□ -0.68
LDLRAD4-203ENST00000399848 PRO1854Q9UHT4 67 aa10.83□□□□□ -0.68
LDLRAD4-203ENST00000399848 TMEM243Q9BU79 118 aa10.83□□□□□ -0.68
LDLRAD4-203ENST00000399848 LRRK2Q5S007 2527 aa10.83□□□□□ -0.68
LDLRAD4-203ENST00000399848 GAGE1Q13065 139 aa10.83□□□□□ -0.68
LDLRAD4-203ENST00000399848 IGHG4P01861 327 aa10.83□□□□□ -0.68
LDLRAD4-203ENST00000399848 TMEM258P61165 79 aa10.83□□□□□ -0.68
LDLRAD4-203ENST00000399848 CSPG4Q6UVK1 2322 aa10.83□□□□□ -0.68
LDLRAD4-203ENST00000399848 IGKV1D-17A0A075B6S4 117 aa10.83□□□□□ -0.68
LDLRAD4-203ENST00000399848 A0A1W2PPI3 338 aa10.83□□□□□ -0.68
LDLRAD4-203ENST00000399848 MST1P26927 711 aa10.82□□□□□ -0.68
LDLRAD4-203ENST00000399848 POLR3KQ9Y2Y1 108 aaPredicted RBP10.82□□□□□ -0.68
LDLRAD4-203ENST00000399848 SYNJ2BPP57105 145 aa10.82□□□□□ -0.68
LDLRAD4-203ENST00000399848 HAMPP81172 84 aa10.82□□□□□ -0.68
LDLRAD4-203ENST00000399848 TRAV25A0A0B4J276 109 aa10.82□□□□□ -0.68
LDLRAD4-203ENST00000399848 F5H768 121 aa10.82□□□□□ -0.68
LDLRAD4-203ENST00000399848 MSMBP08118 114 aa10.82□□□□□ -0.68
LDLRAD4-203ENST00000399848 HLA-DMBP28068 263 aa10.82□□□□□ -0.68
LDLRAD4-203ENST00000399848 PFN2P35080 140 aa10.82□□□□□ -0.68
LDLRAD4-203ENST00000399848 NBL1P41271 181 aa10.82□□□□□ -0.68
LDLRAD4-203ENST00000399848 YPEL3P61236 119 aaPredicted RBP10.82□□□□□ -0.68
LDLRAD4-203ENST00000399848 CD59P13987 128 aa10.82□□□□□ -0.68
LDLRAD4-203ENST00000399848 PRR31Q5SQ13 230 aa10.82□□□□□ -0.68
LDLRAD4-203ENST00000399848 hADV29S1A0JD25 119 aa10.82□□□□□ -0.68
LDLRAD4-203ENST00000399848 HS3ST6Q96QI5 342 aa10.82□□□□□ -0.68
LDLRAD4-203ENST00000399848 PCNX3Q9H6A9 2034 aa10.82□□□□□ -0.68
LDLRAD4-203ENST00000399848 AZU1P20160 251 aa10.82□□□□□ -0.68
LDLRAD4-203ENST00000399848 COX8AP10176 69 aa10.81□□□□□ -0.68
LDLRAD4-203ENST00000399848 CACNA1AO00555 2505 aa10.81□□□□□ -0.68
LDLRAD4-203ENST00000399848 EGR2P11161 476 aaPredicted RBP10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms