RNA–Protein interactions for RNA: ENST00000399127.5

COL25A1-202, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-202ENST00000399127 NUDT3O95989 172 aa9.15□□□□□ -0.94
COL25A1-202ENST00000399127 CAMPP49913 170 aa9.15□□□□□ -0.94
COL25A1-202ENST00000399127 IGFL4Q6B9Z1 124 aa9.15□□□□□ -0.94
COL25A1-202ENST00000399127 PEF1Q9UBV8 284 aaKnown RBP9.15□□□□□ -0.94
COL25A1-202ENST00000399127 P01737 135 aa9.14□□□□□ -0.95
COL25A1-202ENST00000399127 IGLL1P15814 213 aa9.14□□□□□ -0.95
COL25A1-202ENST00000399127 LCN12Q6JVE5 192 aa9.14□□□□□ -0.95
COL25A1-202ENST00000399127 CLEC19AQ6UXS0 136 aa9.14□□□□□ -0.95
COL25A1-202ENST00000399127 NEGR1Q7Z3B1 354 aa9.14□□□□□ -0.95
COL25A1-202ENST00000399127 PIFOQ8TCI5 191 aa9.14□□□□□ -0.95
COL25A1-202ENST00000399127 TSKUQ8WUA8 353 aa9.14□□□□□ -0.95
COL25A1-202ENST00000399127 SSBP4Q9BWG4 385 aaPredicted RBP9.14□□□□□ -0.95
COL25A1-202ENST00000399127 ZNF331Q9NQX6 463 aaPredicted RBP9.14□□□□□ -0.95
COL25A1-202ENST00000399127 NBPF19A0A087WUL8 3843 aa9.14□□□□□ -0.95
COL25A1-202ENST00000399127 IGHV3OR16-13A0A075B7E8 117 aa9.14□□□□□ -0.95
COL25A1-202ENST00000399127 TRAV9-2A0A087WT02 112 aa9.14□□□□□ -0.95
COL25A1-202ENST00000399127 IGHV3-74A0A0B4J1X5 117 aa9.14□□□□□ -0.95
COL25A1-202ENST00000399127 ODF1Q14990 250 aa9.14□□□□□ -0.95
COL25A1-202ENST00000399127 GDF5OSQ5U4N7 250 aa9.14□□□□□ -0.95
COL25A1-202ENST00000399127 UFSP1Q6NVU6 142 aa9.14□□□□□ -0.95
COL25A1-202ENST00000399127 RPP21Q9H633 154 aaKnown RBP9.14□□□□□ -0.95
COL25A1-202ENST00000399127 PGPEP1Q9NXJ5 209 aa9.14□□□□□ -0.95
COL25A1-202ENST00000399127 TRBV9A0A0B4J1U6 114 aa9.13□□□□□ -0.95
COL25A1-202ENST00000399127 IGHV3-66A0A0C4DH42 116 aa9.13□□□□□ -0.95
COL25A1-202ENST00000399127 PMCHL1Q16048 86 aa9.13□□□□□ -0.95
COL25A1-202ENST00000399127 ZNF502Q8TBZ5 544 aa9.13□□□□□ -0.95
COL25A1-202ENST00000399127 DAZAP1Q96EP5 407 aaKnown RBP9.13□□□□□ -0.95
COL25A1-202ENST00000399127 CHD6Q8TD26 2715 aa9.13□□□□□ -0.95
COL25A1-202ENST00000399127 NAV2Q8IVL1 2488 aa9.13□□□□□ -0.95
COL25A1-202ENST00000399127 MXRA5Q9NR99 2828 aa9.13□□□□□ -0.95
COL25A1-202ENST00000399127 BMPR1BO00238 502 aa9.13□□□□□ -0.95
COL25A1-202ENST00000399127 SRIP30626 198 aa9.13□□□□□ -0.95
COL25A1-202ENST00000399127 MAPK1IP1LQ8NDC0 245 aa9.13□□□□□ -0.95
COL25A1-202ENST00000399127 GTSF1Q8WW33 167 aa9.13□□□□□ -0.95
COL25A1-202ENST00000399127 KCNS1Q96KK3 526 aa9.13□□□□□ -0.95
COL25A1-202ENST00000399127 CCDC140Q96MF4 163 aa9.13□□□□□ -0.95
COL25A1-202ENST00000399127 RABAC1Q9UI14 185 aa9.13□□□□□ -0.95
COL25A1-202ENST00000399127 IGHV3-49A0A0A0MS15 119 aa9.12□□□□□ -0.95
COL25A1-202ENST00000399127 C19orf71A6NCJ1 209 aa9.12□□□□□ -0.95
COL25A1-202ENST00000399127 CD5LO43866 347 aa9.12□□□□□ -0.95
COL25A1-202ENST00000399127 MT-ND6P03923 174 aa9.12□□□□□ -0.95
COL25A1-202ENST00000399127 HIF1ANQ9NWT6 349 aa9.12□□□□□ -0.95
COL25A1-202ENST00000399127 MOB4Q9Y3A3 225 aa9.12□□□□□ -0.95
COL25A1-202ENST00000399127 KMT2BQ9UMN6 2715 aaPredicted RBP9.12□□□□□ -0.95
COL25A1-202ENST00000399127 A0A1W2PS18 150 aa9.12□□□□□ -0.95
COL25A1-202ENST00000399127 J3KRW8 73 aa9.12□□□□□ -0.95
COL25A1-202ENST00000399127 ZNF207O43670 478 aaKnown RBP9.12□□□□□ -0.95
COL25A1-202ENST00000399127 HLA-DQA1P01909 254 aa9.12□□□□□ -0.95
COL25A1-202ENST00000399127 APCSP02743 223 aa9.12□□□□□ -0.95
COL25A1-202ENST00000399127 MSMBP08118 114 aa9.12□□□□□ -0.95
COL25A1-202ENST00000399127 DSCR9P59020 149 aa9.12□□□□□ -0.95
COL25A1-202ENST00000399127 PGLYRP4Q96LB8 373 aa9.12□□□□□ -0.95
COL25A1-202ENST00000399127 RCHY1Q96PM5 261 aa9.12□□□□□ -0.95
COL25A1-202ENST00000399127 PRSS22Q9GZN4 317 aa9.12□□□□□ -0.95
COL25A1-202ENST00000399127 AAMDCQ9H7C9 122 aa9.12□□□□□ -0.95
COL25A1-202ENST00000399127 ZNF785A8K8V0 405 aa9.11□□□□□ -0.95
COL25A1-202ENST00000399127 H3BUX3 64 aa9.11□□□□□ -0.95
COL25A1-202ENST00000399127 AVPP01185 164 aa9.11□□□□□ -0.95
COL25A1-202ENST00000399127 HLA-DMBP28068 263 aa9.11□□□□□ -0.95
COL25A1-202ENST00000399127 PET117Q6UWS5 81 aa9.11□□□□□ -0.95
COL25A1-202ENST00000399127 PSG8Q9UQ74 426 aa9.11□□□□□ -0.95
COL25A1-202ENST00000399127 SMAD5-AS1Q9Y6J3 95 aa9.11□□□□□ -0.95
COL25A1-202ENST00000399127 IGKV2-40A0A087WW87 121 aaPredicted RBP9.11□□□□□ -0.95
COL25A1-202ENST00000399127 ZNF324O75467 553 aaPredicted RBP9.11□□□□□ -0.95
COL25A1-202ENST00000399127 SCGB2A1O75556 95 aa9.11□□□□□ -0.95
COL25A1-202ENST00000399127 IGKV2D-40P01614 121 aaPredicted RBP9.11□□□□□ -0.95
COL25A1-202ENST00000399127 RPL7P18124 248 aaKnown RBP9.11□□□□□ -0.95
COL25A1-202ENST00000399127 GTF2H5Q6ZYL4 71 aa9.11□□□□□ -0.95
COL25A1-202ENST00000399127 TRAV41A0A0B4J266 112 aa9.1□□□□□ -0.95
COL25A1-202ENST00000399127 A8MWL6 223 aa9.1□□□□□ -0.95
COL25A1-202ENST00000399127 K7EQM0 130 aa9.1□□□□□ -0.95
COL25A1-202ENST00000399127 C12orf54Q6X4T0 127 aa9.1□□□□□ -0.95
COL25A1-202ENST00000399127 LYPD1Q8N2G4 141 aa9.1□□□□□ -0.95
COL25A1-202ENST00000399127 TMEM75Q8N9X5 138 aa9.1□□□□□ -0.95
COL25A1-202ENST00000399127 BORCS7Q96B45 105 aa9.1□□□□□ -0.95
COL25A1-202ENST00000399127 C8orf49Q96NF6 230 aa9.1□□□□□ -0.95
COL25A1-202ENST00000399127 ZNF492Q9P255 531 aa9.1□□□□□ -0.95
COL25A1-202ENST00000399127 SMIM17P0DL12 118 aa9.1□□□□□ -0.95
COL25A1-202ENST00000399127 TCTEX1D4Q5JR98 221 aa9.1□□□□□ -0.95
COL25A1-202ENST00000399127 FAM19A2Q8N3H0 131 aa9.1□□□□□ -0.95
COL25A1-202ENST00000399127 ZFAND3Q9H8U3 227 aa9.1□□□□□ -0.95
COL25A1-202ENST00000399127 TEX15Q9BXT5 2789 aa9.1□□□□□ -0.95
COL25A1-202ENST00000399127 FAM231BA6NCW3 169 aa9.09□□□□□ -0.95
COL25A1-202ENST00000399127 APOHP02749 345 aaPredicted RBP9.09□□□□□ -0.95
COL25A1-202ENST00000399127 SLC25A16P16260 332 aa9.09□□□□□ -0.95
COL25A1-202ENST00000399127 HSD52Q0P140 79 aa9.09□□□□□ -0.95
COL25A1-202ENST00000399127 PDE6HQ13956 83 aa9.09□□□□□ -0.95
COL25A1-202ENST00000399127 Q6ZS46 218 aa9.09□□□□□ -0.95
COL25A1-202ENST00000399127 GEMIN7Q9H840 131 aaKnown RBP9.09□□□□□ -0.95
COL25A1-202ENST00000399127 DOPEY2Q9Y3R5 2298 aa9.09□□□□□ -0.95
COL25A1-202ENST00000399127 C7orf71A4D174 169 aa9.09□□□□□ -0.95
COL25A1-202ENST00000399127 RNF223E7ERA6 249 aa9.09□□□□□ -0.95
COL25A1-202ENST00000399127 CRIP1P50238 77 aa9.09□□□□□ -0.95
COL25A1-202ENST00000399127 BLCAPP62952 87 aa9.09□□□□□ -0.95
COL25A1-202ENST00000399127 DEFB113Q30KQ7 82 aa9.09□□□□□ -0.95
COL25A1-202ENST00000399127 COX19Q49B96 90 aa9.09□□□□□ -0.95
COL25A1-202ENST00000399127 Q8TAT8 98 aa9.09□□□□□ -0.95
COL25A1-202ENST00000399127 WIPF2Q8TF74 440 aaPredicted RBP9.09□□□□□ -0.95
COL25A1-202ENST00000399127 EEF1AKMT3Q96AZ1 226 aa9.09□□□□□ -0.95
COL25A1-202ENST00000399127 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms