RNA–Protein interactions for RNA: ENST00000399022.8

RPRD1A-202, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1A, Length 4,438 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-202ENST00000399022 NDUFS7O75251 213 aa11.67□□□□□ -0.54
RPRD1A-202ENST00000399022 SSBP2P81877 361 aaPredicted RBP11.67□□□□□ -0.54
RPRD1A-202ENST00000399022 NUP37Q8NFH4 326 aa11.67□□□□□ -0.54
RPRD1A-202ENST00000399022 DKK4Q9UBT3 224 aa11.67□□□□□ -0.54
RPRD1A-202ENST00000399022 ERG28Q9UKR5 140 aa11.67□□□□□ -0.54
RPRD1A-202ENST00000399022 EML5Q05BV3 1969 aa11.66□□□□□ -0.54
RPRD1A-202ENST00000399022 IGHV1-3A0A0C4DH29 117 aa11.66□□□□□ -0.54
RPRD1A-202ENST00000399022 ANXA2RQ3ZCQ2 193 aa11.66□□□□□ -0.54
RPRD1A-202ENST00000399022 CEND1Q8N111 149 aa11.66□□□□□ -0.54
RPRD1A-202ENST00000399022 NDUFA4L2Q9NRX3 87 aa11.66□□□□□ -0.54
RPRD1A-202ENST00000399022 SS18L2Q9UHA2 77 aa11.66□□□□□ -0.54
RPRD1A-202ENST00000399022 B5MCH6 92 aa11.66□□□□□ -0.54
RPRD1A-202ENST00000399022 H7C1H1 209 aa11.66□□□□□ -0.54
RPRD1A-202ENST00000399022 WT1-ASQ06250 92 aa11.66□□□□□ -0.54
RPRD1A-202ENST00000399022 DIAPH2-AS1Q14236 149 aa11.66□□□□□ -0.54
RPRD1A-202ENST00000399022 FAM120AOSQ5T036 256 aa11.66□□□□□ -0.54
RPRD1A-202ENST00000399022 RAX2Q96IS3 184 aa11.66□□□□□ -0.54
RPRD1A-202ENST00000399022 IGF2BP2-AS1Q96M15 143 aa11.66□□□□□ -0.54
RPRD1A-202ENST00000399022 SRRM4A7MD48 611 aaKnown RBP11.66□□□□□ -0.54
RPRD1A-202ENST00000399022 SCGB1A1P11684 91 aa11.66□□□□□ -0.54
RPRD1A-202ENST00000399022 FXYD2P54710 66 aa11.66□□□□□ -0.54
RPRD1A-202ENST00000399022 ATP5J2P56134 94 aa11.66□□□□□ -0.54
RPRD1A-202ENST00000399022 PIP4P1Q86T03 277 aa11.66□□□□□ -0.54
RPRD1A-202ENST00000399022 C8orf49Q96NF6 230 aa11.66□□□□□ -0.54
RPRD1A-202ENST00000399022 MRPL35Q9NZE8 188 aaKnown RBP11.66□□□□□ -0.54
RPRD1A-202ENST00000399022 ASIPP42127 132 aa11.66□□□□□ -0.54
RPRD1A-202ENST00000399022 ZNF56Q15929 161 aa11.66□□□□□ -0.54
RPRD1A-202ENST00000399022 LINC00310P59036 64 aa11.65□□□□□ -0.54
RPRD1A-202ENST00000399022 C12orf74Q32Q52 190 aa11.65□□□□□ -0.54
RPRD1A-202ENST00000399022 PPDPFLQ8WWR9 84 aa11.65□□□□□ -0.54
RPRD1A-202ENST00000399022 CHD9Q3L8U1 2897 aa11.65□□□□□ -0.54
RPRD1A-202ENST00000399022 IGHV3-64A0A075B6Q5 118 aa11.65□□□□□ -0.54
RPRD1A-202ENST00000399022 PAPPA-AS1Q5QFB9 102 aa11.65□□□□□ -0.54
RPRD1A-202ENST00000399022 LINC00527Q9UJ94 153 aa11.65□□□□□ -0.55
RPRD1A-202ENST00000399022 NEU4Q8WWR8 484 aaPredicted RBP11.64□□□□□ -0.55
RPRD1A-202ENST00000399022 NOTCH2Q04721 2471 aa11.64□□□□□ -0.55
RPRD1A-202ENST00000399022 CRXO43186 299 aaPredicted RBP11.64□□□□□ -0.55
RPRD1A-202ENST00000399022 CNTFRP26992 372 aa11.64□□□□□ -0.55
RPRD1A-202ENST00000399022 CLEC19AQ6UXS0 136 aa11.64□□□□□ -0.55
RPRD1A-202ENST00000399022 KMT2EQ8IZD2 1858 aa11.64□□□□□ -0.55
RPRD1A-202ENST00000399022 ATP5G2Q06055 141 aa11.64□□□□□ -0.55
RPRD1A-202ENST00000399022 IGLV3-9A0A075B6K5 115 aa11.63□□□□□ -0.55
RPRD1A-202ENST00000399022 GTSF1Q8WW33 167 aa11.63□□□□□ -0.55
RPRD1A-202ENST00000399022 SIGLEC9Q9Y336 463 aa11.63□□□□□ -0.55
RPRD1A-202ENST00000399022 TRBV25-1A0A075B6N4 114 aa11.63□□□□□ -0.55
RPRD1A-202ENST00000399022 GATA4P43694 442 aa11.63□□□□□ -0.55
RPRD1A-202ENST00000399022 TPSG1Q9NRR2 321 aa11.63□□□□□ -0.55
RPRD1A-202ENST00000399022 LRP4O75096 1905 aa11.63□□□□□ -0.55
RPRD1A-202ENST00000399022 TNRC6AQ8NDV7 1962 aaKnown RBP11.63□□□□□ -0.55
RPRD1A-202ENST00000399022 TRAV12-3A0A0B4J271 114 aa11.63□□□□□ -0.55
RPRD1A-202ENST00000399022 PPP1R17O96001 155 aa11.63□□□□□ -0.55
RPRD1A-202ENST00000399022 CRYBA4P53673 196 aa11.63□□□□□ -0.55
RPRD1A-202ENST00000399022 GDF5OSQ5U4N7 250 aa11.63□□□□□ -0.55
RPRD1A-202ENST00000399022 IGFL3Q6UXB1 125 aa11.63□□□□□ -0.55
RPRD1A-202ENST00000399022 IGKV1OR2-108A0A075B7D4 117 aa11.63□□□□□ -0.55
RPRD1A-202ENST00000399022 PRSS47A8MTI9 375 aa11.63□□□□□ -0.55
RPRD1A-202ENST00000399022 FAM159AQ6UWV7 190 aa11.62□□□□□ -0.55
RPRD1A-202ENST00000399022 THBDP07204 575 aa11.62□□□□□ -0.55
RPRD1A-202ENST00000399022 DSCAML1Q8TD84 2053 aa11.62□□□□□ -0.55
RPRD1A-202ENST00000399022 IGLL5B9A064 214 aa11.62□□□□□ -0.55
RPRD1A-202ENST00000399022 LTAP01374 205 aa11.62□□□□□ -0.55
RPRD1A-202ENST00000399022 KLF12Q9Y4X4 402 aa11.62□□□□□ -0.55
RPRD1A-202ENST00000399022 PRSS46E5RG02 174 aa11.61□□□□□ -0.55
RPRD1A-202ENST00000399022 TRGV3P03979 118 aa11.61□□□□□ -0.55
RPRD1A-202ENST00000399022 MSMPQ1L6U9 139 aa11.61□□□□□ -0.55
RPRD1A-202ENST00000399022 LYPD1Q8N2G4 141 aa11.61□□□□□ -0.55
RPRD1A-202ENST00000399022 PRO3102Q9H379 93 aa11.61□□□□□ -0.55
RPRD1A-202ENST00000399022 BUB1B-PAK6H3BSN5 160 aa11.61□□□□□ -0.55
RPRD1A-202ENST00000399022 IGHV3-11P01762 117 aa11.61□□□□□ -0.55
RPRD1A-202ENST00000399022 TRBV19A0A075B6N1 114 aa11.61□□□□□ -0.55
RPRD1A-202ENST00000399022 IGKV3-20P01619 116 aa11.61□□□□□ -0.55
RPRD1A-202ENST00000399022 FOXI2Q6ZQN5 318 aa11.61□□□□□ -0.55
RPRD1A-202ENST00000399022 BOD1L2Q8IYS8 172 aa11.61□□□□□ -0.55
RPRD1A-202ENST00000399022 FAM167A-AS1Q96KT0 104 aa11.61□□□□□ -0.55
RPRD1A-202ENST00000399022 LOXP28300 417 aaPredicted RBP11.6□□□□□ -0.55
RPRD1A-202ENST00000399022 CIRBPQ14011 172 aaKnown RBP11.6□□□□□ -0.55
RPRD1A-202ENST00000399022 SHANK2-AS3Q9BTD1 123 aa11.6□□□□□ -0.55
RPRD1A-202ENST00000399022 PRUNE2Q8WUY3 3088 aa11.6□□□□□ -0.55
RPRD1A-202ENST00000399022 SLC25A16P16260 332 aa11.6□□□□□ -0.55
RPRD1A-202ENST00000399022 Q8TCH9 128 aa11.6□□□□□ -0.55
RPRD1A-202ENST00000399022 IGLV2-8P01709 118 aa11.6□□□□□ -0.55
RPRD1A-202ENST00000399022 GLMPQ8WWB7 406 aa11.6□□□□□ -0.55
RPRD1A-202ENST00000399022 RRN3P1Q2M238 152 aa11.59□□□□□ -0.55
RPRD1A-202ENST00000399022 PATE2Q6UY27 113 aa11.59□□□□□ -0.55
RPRD1A-202ENST00000399022 SEM1Q6ZVN7 128 aa11.59□□□□□ -0.55
RPRD1A-202ENST00000399022 TMEM75Q8N9X5 138 aa11.59□□□□□ -0.55
RPRD1A-202ENST00000399022 EEF1AKMT3Q96AZ1 226 aa11.59□□□□□ -0.55
RPRD1A-202ENST00000399022 PIEZO1Q92508 2521 aa11.59□□□□□ -0.55
RPRD1A-202ENST00000399022 TRBV20-1A0A075B6N2 111 aa11.59□□□□□ -0.55
RPRD1A-202ENST00000399022 EFNA4P52798 201 aa11.59□□□□□ -0.55
RPRD1A-202ENST00000399022 GAGE5Q13069 117 aa11.59□□□□□ -0.55
RPRD1A-202ENST00000399022 GAGE6Q13070 117 aa11.59□□□□□ -0.55
RPRD1A-202ENST00000399022 C2orf82Q6UX34 121 aa11.59□□□□□ -0.55
RPRD1A-202ENST00000399022 P0C879 139 aa11.59□□□□□ -0.55
RPRD1A-202ENST00000399022 MEIG1Q5JSS6 88 aa11.59□□□□□ -0.55
RPRD1A-202ENST00000399022 ZNF503Q96F45 646 aa11.59□□□□□ -0.55
RPRD1A-202ENST00000399022 RNASE4P34096 147 aaKnown RBP11.58□□□□□ -0.56
RPRD1A-202ENST00000399022 BRWD1-AS2P59051 145 aa11.58□□□□□ -0.56
RPRD1A-202ENST00000399022 C17orf77Q96MU5 243 aa11.58□□□□□ -0.56
RPRD1A-202ENST00000399022 DYSFO75923 2080 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms