RNA–Protein interactions for RNA: ENST00000394989.6

SNCA-204, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,167 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-204ENST00000394989 DAZAP1Q96EP5 407 aaKnown RBP10.82□□□□□ -0.68
SNCA-204ENST00000394989 PGLYRP4Q96LB8 373 aa10.82□□□□□ -0.68
SNCA-204ENST00000394989 SPOCK3Q9BQ16 436 aa10.82□□□□□ -0.68
SNCA-204ENST00000394989 GFRA4Q9GZZ7 299 aa10.82□□□□□ -0.68
SNCA-204ENST00000394989 RABAC1Q9UI14 185 aa10.82□□□□□ -0.68
SNCA-204ENST00000394989 UBR5O95071 2799 aaPredicted RBP10.82□□□□□ -0.68
SNCA-204ENST00000394989 TRAV8-6A0A0B4J262 113 aa10.81□□□□□ -0.68
SNCA-204ENST00000394989 TMEM190Q8WZ59 177 aa10.81□□□□□ -0.68
SNCA-204ENST00000394989 NDUFS8O00217 210 aa10.81□□□□□ -0.68
SNCA-204ENST00000394989 IGHG4P01861 327 aa10.81□□□□□ -0.68
SNCA-204ENST00000394989 PSG9Q00887 426 aa10.81□□□□□ -0.68
SNCA-204ENST00000394989 CLEC2AQ6UVW9 174 aa10.81□□□□□ -0.68
SNCA-204ENST00000394989 NRGNQ92686 78 aa10.81□□□□□ -0.68
SNCA-204ENST00000394989 RPL7P18124 248 aaKnown RBP10.81□□□□□ -0.68
SNCA-204ENST00000394989 C8orf49Q96NF6 230 aa10.81□□□□□ -0.68
SNCA-204ENST00000394989 CENPEQ02224 2701 aa10.8□□□□□ -0.68
SNCA-204ENST00000394989 APOHP02749 345 aaPredicted RBP10.8□□□□□ -0.68
SNCA-204ENST00000394989 PRB1P04280 392 aa10.8□□□□□ -0.68
SNCA-204ENST00000394989 HBBP68871 147 aa10.8□□□□□ -0.68
SNCA-204ENST00000394989 C19orf54Q5BKX5 351 aa10.8□□□□□ -0.68
SNCA-204ENST00000394989 AAMDCQ9H7C9 122 aa10.8□□□□□ -0.68
SNCA-204ENST00000394989 CLPSL1A2RUU4 121 aa10.8□□□□□ -0.68
SNCA-204ENST00000394989 IGFL4Q6B9Z1 124 aa10.8□□□□□ -0.68
SNCA-204ENST00000394989 CLEC19AQ6UXS0 136 aa10.8□□□□□ -0.68
SNCA-204ENST00000394989 RBPMS2Q6ZRY4 209 aaKnown RBP10.8□□□□□ -0.68
SNCA-204ENST00000394989 RAB37Q96AX2 223 aa10.8□□□□□ -0.68
SNCA-204ENST00000394989 TMEM70Q9BUB7 260 aa10.8□□□□□ -0.68
SNCA-204ENST00000394989 CSTL1Q9H114 145 aa10.8□□□□□ -0.68
SNCA-204ENST00000394989 LINC00527Q9UJ94 153 aa10.8□□□□□ -0.68
SNCA-204ENST00000394989 ZNF462Q96JM2 2506 aa10.8□□□□□ -0.68
SNCA-204ENST00000394989 ZANQ9Y493 2812 aa10.79□□□□□ -0.68
SNCA-204ENST00000394989 FAM231BA6NCW3 169 aa10.79□□□□□ -0.68
SNCA-204ENST00000394989 K7EQM0 130 aa10.79□□□□□ -0.68
SNCA-204ENST00000394989 MOB4Q9Y3A3 225 aa10.79□□□□□ -0.68
SNCA-204ENST00000394989 SCGB2A1O75556 95 aa10.79□□□□□ -0.68
SNCA-204ENST00000394989 HLA-DMBP28068 263 aa10.79□□□□□ -0.68
SNCA-204ENST00000394989 IGKV2-40A0A087WW87 121 aaPredicted RBP10.79□□□□□ -0.68
SNCA-204ENST00000394989 C2orf70A6NJV1 201 aa10.79□□□□□ -0.68
SNCA-204ENST00000394989 TMEM238C9JI98 176 aa10.79□□□□□ -0.68
SNCA-204ENST00000394989 IGKV2D-40P01614 121 aaPredicted RBP10.79□□□□□ -0.68
SNCA-204ENST00000394989 BVES-AS1Q5T3Y7 98 aa10.79□□□□□ -0.68
SNCA-204ENST00000394989 BUB3O43684 328 aa10.78□□□□□ -0.68
SNCA-204ENST00000394989 FBLL1A6NHQ2 334 aaKnown RBP10.78□□□□□ -0.68
SNCA-204ENST00000394989 KLF5Q13887 457 aaPredicted RBP10.78□□□□□ -0.68
SNCA-204ENST00000394989 SLC25A34Q6PIV7 304 aa10.78□□□□□ -0.68
SNCA-204ENST00000394989 BBC3Q96PG8 261 aaPredicted RBP10.78□□□□□ -0.68
SNCA-204ENST00000394989 HSBP1L1C9JCN9 74 aa10.77□□□□□ -0.68
SNCA-204ENST00000394989 CHEK1O14757 476 aa10.77□□□□□ -0.69
SNCA-204ENST00000394989 LEPROTL1O95214 131 aa10.77□□□□□ -0.69
SNCA-204ENST00000394989 TRAV41A0A0B4J266 112 aa10.77□□□□□ -0.69
SNCA-204ENST00000394989 MSMBP08118 114 aa10.77□□□□□ -0.69
SNCA-204ENST00000394989 Q5PR19 223 aa10.77□□□□□ -0.69
SNCA-204ENST00000394989 IGHV3-66A0A0C4DH42 116 aa10.76□□□□□ -0.69
SNCA-204ENST00000394989 K7ERU9 68 aa10.76□□□□□ -0.69
SNCA-204ENST00000394989 AVPP01185 164 aa10.76□□□□□ -0.69
SNCA-204ENST00000394989 CRIP2P52943 208 aaPredicted RBP10.76□□□□□ -0.69
SNCA-204ENST00000394989 EEF1AKMT3Q96AZ1 226 aa10.76□□□□□ -0.69
SNCA-204ENST00000394989 TRBV7-1A0A0A6YYK4 115 aa10.76□□□□□ -0.69
SNCA-204ENST00000394989 GAGE10A6NGK3 116 aa10.76□□□□□ -0.69
SNCA-204ENST00000394989 CSN1S1P47710 185 aa10.76□□□□□ -0.69
SNCA-204ENST00000394989 FXYD7P58549 80 aa10.76□□□□□ -0.69
SNCA-204ENST00000394989 TM4SF20Q53R12 229 aa10.76□□□□□ -0.69
SNCA-204ENST00000394989 URB1-AS1Q96HZ7 61 aa10.76□□□□□ -0.69
SNCA-204ENST00000394989 VGLL1Q99990 258 aa10.76□□□□□ -0.69
SNCA-204ENST00000394989 HAX1O00165 279 aa10.75□□□□□ -0.69
SNCA-204ENST00000394989 PPBPP02775 128 aa10.75□□□□□ -0.69
SNCA-204ENST00000394989 LY6EQ16553 131 aa10.75□□□□□ -0.69
SNCA-204ENST00000394989 Q8TAT8 98 aa10.75□□□□□ -0.69
SNCA-204ENST00000394989 LRRK2Q5S007 2527 aa10.75□□□□□ -0.69
SNCA-204ENST00000394989 IGHV3OR16-13A0A075B7E8 117 aa10.75□□□□□ -0.69
SNCA-204ENST00000394989 IGHV3-74A0A0B4J1X5 117 aa10.75□□□□□ -0.69
SNCA-204ENST00000394989 SERTM2A0A1B0GWG4 89 aa10.75□□□□□ -0.69
SNCA-204ENST00000394989 ARMS2P0C7Q2 107 aa10.75□□□□□ -0.69
SNCA-204ENST00000394989 COX8CQ7Z4L0 72 aa10.75□□□□□ -0.69
SNCA-204ENST00000394989 AP1S3Q96PC3 154 aa10.75□□□□□ -0.69
SNCA-204ENST00000394989 C7orf71A4D174 169 aa10.75□□□□□ -0.69
SNCA-204ENST00000394989 PRR25Q96S07 402 aa10.75□□□□□ -0.69
SNCA-204ENST00000394989 POLQO75417 2590 aa10.74□□□□□ -0.69
SNCA-204ENST00000394989 H3BUX3 64 aa10.74□□□□□ -0.69
SNCA-204ENST00000394989 TPPP3Q9BW30 176 aa10.74□□□□□ -0.69
SNCA-204ENST00000394989 HIF1ANQ9NWT6 349 aa10.74□□□□□ -0.69
SNCA-204ENST00000394989 SYS1-DBNDD2H3BUS1 97 aa10.74□□□□□ -0.69
SNCA-204ENST00000394989 H3BUT2 72 aa10.74□□□□□ -0.69
SNCA-204ENST00000394989 ZNF207O43670 478 aaKnown RBP10.74□□□□□ -0.69
SNCA-204ENST00000394989 ATP5G2Q06055 141 aa10.74□□□□□ -0.69
SNCA-204ENST00000394989 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.74□□□□□ -0.69
SNCA-204ENST00000394989 Q6ZS46 218 aa10.74□□□□□ -0.69
SNCA-204ENST00000394989 IGHV3-49A0A0A0MS15 119 aa10.73□□□□□ -0.69
SNCA-204ENST00000394989 IGF1P05019 195 aa10.73□□□□□ -0.69
SNCA-204ENST00000394989 ZNF80P51504 273 aaPredicted RBP10.73□□□□□ -0.69
SNCA-204ENST00000394989 ZNF575Q86XF7 245 aa10.73□□□□□ -0.69
SNCA-204ENST00000394989 RNF182Q8N6D2 247 aa10.73□□□□□ -0.69
SNCA-204ENST00000394989 ANKRD17O75179 2603 aaKnown RBP10.73□□□□□ -0.69
SNCA-204ENST00000394989 IGHV1-24A0A0C4DH33 117 aa10.73□□□□□ -0.69
SNCA-204ENST00000394989 A6NDX4 124 aa10.73□□□□□ -0.69
SNCA-204ENST00000394989 PRAC2D3DTV9 90 aa10.73□□□□□ -0.69
SNCA-204ENST00000394989 SH2D1AO60880 128 aa10.73□□□□□ -0.69
SNCA-204ENST00000394989 SRSF1Q07955 248 aaKnown RBP eCLIP10.73□□□□□ -0.69
SNCA-204ENST00000394989 A0A1B0GUT8 65 aa10.73□□□□□ -0.69
SNCA-204ENST00000394989 CT45A10P0DMU9 189 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms