RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 TRAV3A0A0B4J244 114 aa4.55□□□□□ -1.68
RFFL-202ENST00000394597 IGLL5B9A064 214 aa4.55□□□□□ -1.68
RFFL-202ENST00000394597 FCN3O75636 299 aa4.55□□□□□ -1.68
RFFL-202ENST00000394597 LOXL3P58215 753 aa4.55□□□□□ -1.68
RFFL-202ENST00000394597 SPANXN1Q5VSR9 72 aa4.55□□□□□ -1.68
RFFL-202ENST00000394597 C22orf34Q6ZV56 151 aa4.55□□□□□ -1.68
RFFL-202ENST00000394597 Q8N976 141 aa4.55□□□□□ -1.68
RFFL-202ENST00000394597 TMEM167AQ8TBQ9 72 aa4.55□□□□□ -1.68
RFFL-202ENST00000394597 WIPF2Q8TF74 440 aaPredicted RBP4.55□□□□□ -1.68
RFFL-202ENST00000394597 Q9H3A6 140 aa4.55□□□□□ -1.68
RFFL-202ENST00000394597 IGF2RP11717 2491 aa4.55□□□□□ -1.68
RFFL-202ENST00000394597 CHD8Q9HCK8 2581 aa4.55□□□□□ -1.68
RFFL-202ENST00000394597 IGKV3-7A0A075B6H7 116 aa4.55□□□□□ -1.68
RFFL-202ENST00000394597 TRAV2A0A0B4J234 112 aa4.55□□□□□ -1.68
RFFL-202ENST00000394597 ZNF815PA8K554 130 aa4.55□□□□□ -1.68
RFFL-202ENST00000394597 C9JAW5 83 aa4.55□□□□□ -1.68
RFFL-202ENST00000394597 NCR2O95944 276 aa4.55□□□□□ -1.68
RFFL-202ENST00000394597 ZNF134P52741 427 aa4.55□□□□□ -1.68
RFFL-202ENST00000394597 FOXI1Q12951 378 aa4.55□□□□□ -1.68
RFFL-202ENST00000394597 C12orf74Q32Q52 190 aa4.55□□□□□ -1.68
RFFL-202ENST00000394597 FAM231DQ6ZW35 169 aa4.55□□□□□ -1.68
RFFL-202ENST00000394597 CEND1Q8N111 149 aa4.55□□□□□ -1.68
RFFL-202ENST00000394597 LINC00311Q8N616 119 aa4.55□□□□□ -1.68
RFFL-202ENST00000394597 SMPXQ9UHP9 88 aa4.55□□□□□ -1.68
RFFL-202ENST00000394597 PRR14LQ5THK1 2151 aa4.55□□□□□ -1.68
RFFL-202ENST00000394597 LINC01549A6NIU2 74 aa4.54□□□□□ -1.68
RFFL-202ENST00000394597 K7EMI3 77 aa4.54□□□□□ -1.68
RFFL-202ENST00000394597 IGHV4-39P01824 125 aa4.54□□□□□ -1.68
RFFL-202ENST00000394597 MT-ATP8P03928 68 aa4.54□□□□□ -1.68
RFFL-202ENST00000394597 CIARTQ8N365 385 aaPredicted RBP4.54□□□□□ -1.68
RFFL-202ENST00000394597 SIGLEC8Q9NYZ4 499 aa4.54□□□□□ -1.68
RFFL-202ENST00000394597 PIEZO2Q9H5I5 2752 aa4.54□□□□□ -1.68
RFFL-202ENST00000394597 TCRBV4S1A1TA0A5B7 111 aa4.54□□□□□ -1.68
RFFL-202ENST00000394597 B4DSR2 109 aa4.54□□□□□ -1.68
RFFL-202ENST00000394597 C3orf56Q8N813 242 aa4.54□□□□□ -1.68
RFFL-202ENST00000394597 ERG28Q9UKR5 140 aa4.54□□□□□ -1.68
RFFL-202ENST00000394597 KMT2EQ8IZD2 1858 aa4.54□□□□□ -1.68
RFFL-202ENST00000394597 IGKV1-16P04430 117 aa4.54□□□□□ -1.68
RFFL-202ENST00000394597 ARMS2P0C7Q2 107 aa4.54□□□□□ -1.68
RFFL-202ENST00000394597 SLC25A16P16260 332 aa4.54□□□□□ -1.68
RFFL-202ENST00000394597 LGALS3P17931 250 aaKnown RBP4.54□□□□□ -1.68
RFFL-202ENST00000394597 DAZAP2Q15038 168 aaPredicted RBP4.54□□□□□ -1.68
RFFL-202ENST00000394597 C5orf64Q2M2E5 130 aa4.54□□□□□ -1.68
RFFL-202ENST00000394597 SHISA2Q6UWI4 295 aa4.54□□□□□ -1.68
RFFL-202ENST00000394597 ZNF833PQ6ZTB9 187 aa4.54□□□□□ -1.68
RFFL-202ENST00000394597 GLMPQ8WWB7 406 aa4.54□□□□□ -1.68
RFFL-202ENST00000394597 NXT2Q9NPJ8 142 aaKnown RBP4.54□□□□□ -1.68
RFFL-202ENST00000394597 SPANXB1Q9NS25 103 aaPredicted RBP4.54□□□□□ -1.68
RFFL-202ENST00000394597 ZNRD1Q9P1U0 126 aa4.54□□□□□ -1.68
RFFL-202ENST00000394597 CTSZQ9UBR2 303 aa4.54□□□□□ -1.68
RFFL-202ENST00000394597 MALRD1Q5VYJ5 2156 aa4.54□□□□□ -1.68
RFFL-202ENST00000394597 CD69Q07108 199 aa4.54□□□□□ -1.68
RFFL-202ENST00000394597 RRN3P1Q2M238 152 aa4.54□□□□□ -1.68
RFFL-202ENST00000394597 Q6ZUT4 128 aa4.54□□□□□ -1.68
RFFL-202ENST00000394597 SCGB3A1Q96QR1 104 aa4.54□□□□□ -1.68
RFFL-202ENST00000394597 FNDC10F2Z333 226 aa4.53□□□□□ -1.68
RFFL-202ENST00000394597 PRB1P04280 392 aa4.53□□□□□ -1.68
RFFL-202ENST00000394597 PRB4P10163 310 aaPredicted RBP4.53□□□□□ -1.68
RFFL-202ENST00000394597 TMEM170BQ5T4T1 132 aa4.53□□□□□ -1.68
RFFL-202ENST00000394597 AMN1Q8IY45 258 aa4.53□□□□□ -1.68
RFFL-202ENST00000394597 NAV3Q8IVL0 2385 aa4.53□□□□□ -1.68
RFFL-202ENST00000394597 TRAV40A0A0B4J280 105 aa4.53□□□□□ -1.68
RFFL-202ENST00000394597 F5H697 171 aa4.53□□□□□ -1.68
RFFL-202ENST00000394597 MGPP08493 103 aa4.53□□□□□ -1.68
RFFL-202ENST00000394597 RPL32P62910 135 aaKnown RBP4.53□□□□□ -1.68
RFFL-202ENST00000394597 ZNF56Q15929 161 aa4.53□□□□□ -1.68
RFFL-202ENST00000394597 EEF1AKMT3Q96AZ1 226 aa4.53□□□□□ -1.68
RFFL-202ENST00000394597 DKK2Q9UBU2 259 aa4.53□□□□□ -1.68
RFFL-202ENST00000394597 ANKHD1Q8IWZ3 2542 aaKnown RBP4.53□□□□□ -1.68
RFFL-202ENST00000394597 TRBV25-1A0A075B6N4 114 aa4.53□□□□□ -1.68
RFFL-202ENST00000394597 SMKR1H3BMG3 65 aa4.53□□□□□ -1.68
RFFL-202ENST00000394597 NPFFO15130 113 aa4.53□□□□□ -1.68
RFFL-202ENST00000394597 PLXNB1O43157 2135 aa4.53□□□□□ -1.68
RFFL-202ENST00000394597 TNFRSF6BO95407 300 aa4.53□□□□□ -1.68
RFFL-202ENST00000394597 C10orf55Q5SWW7 151 aa4.53□□□□□ -1.68
RFFL-202ENST00000394597 UFSP1Q6NVU6 142 aa4.53□□□□□ -1.68
RFFL-202ENST00000394597 C8orf31Q8N9H6 132 aa4.53□□□□□ -1.68
RFFL-202ENST00000394597 OR10J6PQ8NGY7 276 aa4.53□□□□□ -1.68
RFFL-202ENST00000394597 TTTY13Q9BZ97 58 aa4.53□□□□□ -1.68
RFFL-202ENST00000394597 SIGLEC9Q9Y336 463 aa4.53□□□□□ -1.68
RFFL-202ENST00000394597 DSCAML1Q8TD84 2053 aa4.53□□□□□ -1.68
RFFL-202ENST00000394597 VCANP13611 3396 aa4.53□□□□□ -1.68
RFFL-202ENST00000394597 NCKAP5O14513 1909 aa4.53□□□□□ -1.69
RFFL-202ENST00000394597 NDUFS7O75251 213 aa4.52□□□□□ -1.69
RFFL-202ENST00000394597 MYOD1P15172 320 aa4.52□□□□□ -1.69
RFFL-202ENST00000394597 UBE2E1P51965 193 aa4.52□□□□□ -1.69
RFFL-202ENST00000394597 CR1LQ2VPA4 569 aa4.52□□□□□ -1.69
RFFL-202ENST00000394597 ZNF329Q86UD4 541 aa4.52□□□□□ -1.69
RFFL-202ENST00000394597 EDA2RQ9HAV5 297 aa4.52□□□□□ -1.69
RFFL-202ENST00000394597 C21orf62Q9NYP8 219 aa4.52□□□□□ -1.69
RFFL-202ENST00000394597 TCRAP04437 139 aa4.52□□□□□ -1.69
RFFL-202ENST00000394597 SPATA25Q9BR10 227 aa4.52□□□□□ -1.69
RFFL-202ENST00000394597 CPAMD8Q8IZJ3 1885 aa4.52□□□□□ -1.69
RFFL-202ENST00000394597 J3QKU1 62 aa4.52□□□□□ -1.69
RFFL-202ENST00000394597 MLANAQ16655 118 aa4.52□□□□□ -1.69
RFFL-202ENST00000394597 LYZL1Q6UWQ5 148 aa4.52□□□□□ -1.69
RFFL-202ENST00000394597 DTX2Q86UW9 622 aa4.52□□□□□ -1.69
RFFL-202ENST00000394597 C15orf53Q8NAA6 179 aa4.52□□□□□ -1.69
RFFL-202ENST00000394597 GFRA4Q9GZZ7 299 aa4.52□□□□□ -1.69
RFFL-202ENST00000394597 TMEM14BQ9NUH8 114 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms