RNA–Protein interactions for RNA: ENST00000394092.6

SMAD1-202, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,658 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-202ENST00000394092 Q8TAT8 98 aa5.55□□□□□ -1.52
SMAD1-202ENST00000394092 PIFOQ8TCI5 191 aa5.55□□□□□ -1.52
SMAD1-202ENST00000394092 URB1-AS1Q96HZ7 61 aa5.55□□□□□ -1.52
SMAD1-202ENST00000394092 VGLL1Q99990 258 aa5.55□□□□□ -1.52
SMAD1-202ENST00000394092 MAP1LC3CQ9BXW4 147 aa5.55□□□□□ -1.52
SMAD1-202ENST00000394092 TMEM191AQ9H0A3 160 aa5.55□□□□□ -1.52
SMAD1-202ENST00000394092 AP5S1Q9NUS5 200 aa5.55□□□□□ -1.52
SMAD1-202ENST00000394092 U3KQE9 123 aa5.55□□□□□ -1.52
SMAD1-202ENST00000394092 CACNA1BQ00975 2339 aa5.54□□□□□ -1.52
SMAD1-202ENST00000394092 IGHV3OR16-8A0A075B7F1 116 aa5.54□□□□□ -1.52
SMAD1-202ENST00000394092 TRAV9-2A0A087WT02 112 aa5.54□□□□□ -1.52
SMAD1-202ENST00000394092 TMSB15BA0A087X1C1 80 aa5.54□□□□□ -1.52
SMAD1-202ENST00000394092 A0A1B0GV90 55 aa5.54□□□□□ -1.52
SMAD1-202ENST00000394092 LINC01548A6NM66 108 aa5.54□□□□□ -1.52
SMAD1-202ENST00000394092 IGHG4P01861 327 aa5.54□□□□□ -1.52
SMAD1-202ENST00000394092 ORM1P02763 201 aa5.54□□□□□ -1.52
SMAD1-202ENST00000394092 IGLC6P0CF74 106 aa5.54□□□□□ -1.52
SMAD1-202ENST00000394092 IGHV4-38-2P0DP08 117 aa5.54□□□□□ -1.52
SMAD1-202ENST00000394092 TDRG1Q3Y452 100 aa5.54□□□□□ -1.52
SMAD1-202ENST00000394092 FAM104BQ5XKR9 115 aa5.54□□□□□ -1.52
SMAD1-202ENST00000394092 EBLN2Q6P2I7 272 aa5.54□□□□□ -1.52
SMAD1-202ENST00000394092 PET117Q6UWS5 81 aa5.54□□□□□ -1.52
SMAD1-202ENST00000394092 C8orf86Q6ZUL3 223 aa5.54□□□□□ -1.52
SMAD1-202ENST00000394092 Q71RC1 249 aaPredicted RBP5.54□□□□□ -1.52
SMAD1-202ENST00000394092 OR10AG1Q8NH19 301 aa5.54□□□□□ -1.52
SMAD1-202ENST00000394092 PRSS3P2Q8NHM4 247 aa5.54□□□□□ -1.52
SMAD1-202ENST00000394092 SNHG12Q9BXW3 62 aa5.54□□□□□ -1.52
SMAD1-202ENST00000394092 PPP1R14DQ9NXH3 145 aa5.54□□□□□ -1.52
SMAD1-202ENST00000394092 ZNF580Q9UK33 172 aa5.54□□□□□ -1.52
SMAD1-202ENST00000394092 HSBP1L1C9JCN9 74 aa5.53□□□□□ -1.52
SMAD1-202ENST00000394092 SYS1-DBNDD2H3BUS1 97 aa5.53□□□□□ -1.52
SMAD1-202ENST00000394092 PPBPP02775 128 aa5.53□□□□□ -1.52
SMAD1-202ENST00000394092 IGLC3P0DOY3 106 aa5.53□□□□□ -1.52
SMAD1-202ENST00000394092 HLA-DMBP28068 263 aa5.53□□□□□ -1.52
SMAD1-202ENST00000394092 HNRNPA3P51991 378 aaKnown RBP5.53□□□□□ -1.52
SMAD1-202ENST00000394092 ZNF138P52744 262 aa5.53□□□□□ -1.52
SMAD1-202ENST00000394092 NUTF2P61970 127 aaKnown RBP5.53□□□□□ -1.52
SMAD1-202ENST00000394092 LY6EQ16553 131 aa5.53□□□□□ -1.52
SMAD1-202ENST00000394092 GLMPQ8WWB7 406 aa5.53□□□□□ -1.52
SMAD1-202ENST00000394092 C16orf92Q96LL3 132 aa5.53□□□□□ -1.52
SMAD1-202ENST00000394092 CNFNQ9BYD5 112 aa5.53□□□□□ -1.52
SMAD1-202ENST00000394092 LAMTOR2Q9Y2Q5 125 aa5.53□□□□□ -1.52
SMAD1-202ENST00000394092 LENEPQ9Y5L5 61 aa5.53□□□□□ -1.52
SMAD1-202ENST00000394092 U3KQK5 164 aa5.53□□□□□ -1.52
SMAD1-202ENST00000394092 DOPEY1Q5JWR5 2465 aa5.53□□□□□ -1.52
SMAD1-202ENST00000394092 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.53□□□□□ -1.527e-8■■■□□ 16.4
SMAD1-202ENST00000394092 IGHV3-66A0A0C4DH42 116 aa5.53□□□□□ -1.52
SMAD1-202ENST00000394092 OR4C46A6NHA9 309 aa5.53□□□□□ -1.52
SMAD1-202ENST00000394092 D6R8Y8 96 aa5.53□□□□□ -1.52
SMAD1-202ENST00000394092 J3QLI3 93 aa5.53□□□□□ -1.52
SMAD1-202ENST00000394092 M0QZ24 198 aa5.53□□□□□ -1.52
SMAD1-202ENST00000394092 RPLP1P05386 114 aaKnown RBP5.53□□□□□ -1.52
SMAD1-202ENST00000394092 CSN3P07498 182 aa5.53□□□□□ -1.52
SMAD1-202ENST00000394092 PPIFP30405 207 aaKnown RBP5.53□□□□□ -1.52
SMAD1-202ENST00000394092 ZNF80P51504 273 aaPredicted RBP5.53□□□□□ -1.52
SMAD1-202ENST00000394092 TWIST1Q15672 202 aa5.53□□□□□ -1.52
SMAD1-202ENST00000394092 SAMD13Q5VXD3 122 aa5.53□□□□□ -1.52
SMAD1-202ENST00000394092 IGFL4Q6B9Z1 124 aa5.53□□□□□ -1.52
SMAD1-202ENST00000394092 C9orf47Q6ZRZ4 202 aa5.53□□□□□ -1.52
SMAD1-202ENST00000394092 KRTAP1-3Q8IUG1 177 aa5.53□□□□□ -1.52
SMAD1-202ENST00000394092 RNF182Q8N6D2 247 aa5.53□□□□□ -1.52
SMAD1-202ENST00000394092 PRELID3AQ96N28 172 aa5.53□□□□□ -1.52
SMAD1-202ENST00000394092 ST20Q9HBF5 79 aa5.53□□□□□ -1.52
SMAD1-202ENST00000394092 IGHV3OR16-13A0A075B7E8 117 aa5.52□□□□□ -1.53
SMAD1-202ENST00000394092 IGHV3-74A0A0B4J1X5 117 aa5.52□□□□□ -1.53
SMAD1-202ENST00000394092 TRAV8-2A0A0B4J237 113 aa5.52□□□□□ -1.53
SMAD1-202ENST00000394092 TMEM213A2RRL7 107 aa5.52□□□□□ -1.53
SMAD1-202ENST00000394092 OVOL1O14753 267 aa5.52□□□□□ -1.53
SMAD1-202ENST00000394092 ZNF207O43670 478 aaKnown RBP5.52□□□□□ -1.53
SMAD1-202ENST00000394092 PF4V1P10720 104 aa5.52□□□□□ -1.53
SMAD1-202ENST00000394092 COX6B1P14854 86 aa5.52□□□□□ -1.53
SMAD1-202ENST00000394092 CKS2P33552 79 aa5.52□□□□□ -1.53
SMAD1-202ENST00000394092 ERCC8Q13216 396 aa5.52□□□□□ -1.53
SMAD1-202ENST00000394092 Q6ZN92 141 aa5.52□□□□□ -1.53
SMAD1-202ENST00000394092 IL17RELQ6ZVW7 336 aa5.52□□□□□ -1.53
SMAD1-202ENST00000394092 SMIM15Q7Z3B0 74 aa5.52□□□□□ -1.53
SMAD1-202ENST00000394092 AMN1Q8IY45 258 aa5.52□□□□□ -1.53
SMAD1-202ENST00000394092 LINC01356Q8N9X3 169 aa5.52□□□□□ -1.53
SMAD1-202ENST00000394092 LINC00527Q9UJ94 153 aa5.52□□□□□ -1.53
SMAD1-202ENST00000394092 TMEM89A2RUT3 159 aa5.51□□□□□ -1.53
SMAD1-202ENST00000394092 PRAC2D3DTV9 90 aa5.51□□□□□ -1.53
SMAD1-202ENST00000394092 PRB4P10163 310 aaPredicted RBP5.51□□□□□ -1.53
SMAD1-202ENST00000394092 CACNG7P62955 275 aa5.51□□□□□ -1.53
SMAD1-202ENST00000394092 MRPL51Q4U2R6 128 aaKnown RBP5.51□□□□□ -1.53
SMAD1-202ENST00000394092 PRR31Q5SQ13 230 aa5.51□□□□□ -1.53
SMAD1-202ENST00000394092 COL5A1-AS1Q5SY13 56 aa5.51□□□□□ -1.53
SMAD1-202ENST00000394092 SPATA12Q7Z6I5 190 aa5.51□□□□□ -1.53
SMAD1-202ENST00000394092 ATOH7Q8N100 152 aa5.51□□□□□ -1.53
SMAD1-202ENST00000394092 ZNF738Q8NE65 137 aa5.51□□□□□ -1.53
SMAD1-202ENST00000394092 OR10J6PQ8NGY7 276 aa5.51□□□□□ -1.53
SMAD1-202ENST00000394092 NPFFR1Q9GZQ6 430 aa5.51□□□□□ -1.53
SMAD1-202ENST00000394092 AGPAT4-IT1Q9H0P7 198 aa5.51□□□□□ -1.53
SMAD1-202ENST00000394092 MRPS16Q9Y3D3 137 aaKnown RBP5.51□□□□□ -1.53
SMAD1-202ENST00000394092 IGHV3-49A0A0A0MS15 119 aa5.5□□□□□ -1.53
SMAD1-202ENST00000394092 IGLV1-40P01703 118 aa5.5□□□□□ -1.53
SMAD1-202ENST00000394092 HBDP02042 147 aa5.5□□□□□ -1.53
SMAD1-202ENST00000394092 OR4X2Q8NGF9 303 aa5.5□□□□□ -1.53
SMAD1-202ENST00000394092 LINC00477Q96M19 166 aa5.5□□□□□ -1.53
SMAD1-202ENST00000394092 MS4A6AQ9H2W1 248 aa5.5□□□□□ -1.53
SMAD1-202ENST00000394092 MAP1LC3AQ9H492 121 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms