RNA–Protein interactions for RNA: ENST00000394083.6

GAPVD1-204, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5 BASIC

Gene GAPVD1, Length 4,747 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-204ENST00000394083 DUX5Q96PT3 197 aa6.33□□□□□ -1.4
GAPVD1-204ENST00000394083 PRR25Q96S07 402 aa6.33□□□□□ -1.4
GAPVD1-204ENST00000394083 FXYD7P58549 80 aa6.33□□□□□ -1.4
GAPVD1-204ENST00000394083 BAGE2Q86Y30 109 aa6.33□□□□□ -1.4
GAPVD1-204ENST00000394083 RASL11BQ9BPW5 248 aa6.33□□□□□ -1.4
GAPVD1-204ENST00000394083 GAR1Q9NY12 217 aaKnown RBP6.33□□□□□ -1.4
GAPVD1-204ENST00000394083 HIGD1AQ9Y241 93 aa6.33□□□□□ -1.4
GAPVD1-204ENST00000394083 A0A087X0K7 114 aa6.33□□□□□ -1.4
GAPVD1-204ENST00000394083 TSPAN9O75954 239 aa6.33□□□□□ -1.4
GAPVD1-204ENST00000394083 LINC00315P59091 139 aa6.33□□□□□ -1.4
GAPVD1-204ENST00000394083 ZNF580Q9UK33 172 aa6.33□□□□□ -1.4
GAPVD1-204ENST00000394083 TRAPPC1Q9Y5R8 145 aa6.33□□□□□ -1.4
GAPVD1-204ENST00000394083 HIVEP2P31629 2446 aa6.32□□□□□ -1.4
GAPVD1-204ENST00000394083 IZUMO1RA6ND01 250 aa6.32□□□□□ -1.4
GAPVD1-204ENST00000394083 SRSF2Q01130 221 aaKnown RBP6.32□□□□□ -1.4
GAPVD1-204ENST00000394083 TM4SF20Q53R12 229 aa6.32□□□□□ -1.4
GAPVD1-204ENST00000394083 TEX43Q6ZNM6 134 aa6.32□□□□□ -1.4
GAPVD1-204ENST00000394083 CNFNQ9BYD5 112 aa6.32□□□□□ -1.4
GAPVD1-204ENST00000394083 PFDN5Q99471 154 aa6.32□□□□□ -1.4
GAPVD1-204ENST00000394083 CT45A10P0DMU9 189 aa6.32□□□□□ -1.4
GAPVD1-204ENST00000394083 SRIP30626 198 aa6.32□□□□□ -1.4
GAPVD1-204ENST00000394083 C5orf17Q8NAS9 161 aa6.32□□□□□ -1.4
GAPVD1-204ENST00000394083 ENY2Q9NPA8 101 aa6.32□□□□□ -1.4
GAPVD1-204ENST00000394083 RPH3ALQ9UNE2 315 aa6.32□□□□□ -1.4
GAPVD1-204ENST00000394083 RBMY1BA6NDE4 496 aaKnown RBP6.31□□□□□ -1.4
GAPVD1-204ENST00000394083 RBMY1EA6NEQ0 496 aaKnown RBP6.31□□□□□ -1.4
GAPVD1-204ENST00000394083 FAM181BA6NEQ2 426 aa6.31□□□□□ -1.4
GAPVD1-204ENST00000394083 CNIH1O95406 144 aa6.31□□□□□ -1.4
GAPVD1-204ENST00000394083 IGHV3-11P01762 117 aa6.31□□□□□ -1.4
GAPVD1-204ENST00000394083 RBMY1DP0C7P1 496 aaKnown RBP6.31□□□□□ -1.4
GAPVD1-204ENST00000394083 RAB9BQ9NP90 201 aa6.31□□□□□ -1.4
GAPVD1-204ENST00000394083 OTORQ9NRC9 128 aa6.31□□□□□ -1.4
GAPVD1-204ENST00000394083 ZNF492Q9P255 531 aa6.31□□□□□ -1.4
GAPVD1-204ENST00000394083 TMEM8BA6NDV4 472 aa6.31□□□□□ -1.4
GAPVD1-204ENST00000394083 PSG8Q9UQ74 426 aa6.31□□□□□ -1.4
GAPVD1-204ENST00000394083 U3KQK5 164 aa6.31□□□□□ -1.4
GAPVD1-204ENST00000394083 OOSP1A8MZH6 123 aa6.31□□□□□ -1.4
GAPVD1-204ENST00000394083 IFNA1P01562 189 aa6.31□□□□□ -1.4
GAPVD1-204ENST00000394083 ATP5J2P56134 94 aa6.31□□□□□ -1.4
GAPVD1-204ENST00000394083 FAM209BQ5JX69 171 aa6.31□□□□□ -1.4
GAPVD1-204ENST00000394083 PRNTQ86SH4 94 aa6.31□□□□□ -1.4
GAPVD1-204ENST00000394083 APRG1Q8IVJ8 170 aa6.31□□□□□ -1.4
GAPVD1-204ENST00000394083 IGHV1-24A0A0C4DH33 117 aa6.31□□□□□ -1.4
GAPVD1-204ENST00000394083 SMKR1H3BMG3 65 aa6.31□□□□□ -1.4
GAPVD1-204ENST00000394083 C8orf86Q6ZUL3 223 aa6.31□□□□□ -1.4
GAPVD1-204ENST00000394083 PGLYRP4Q96LB8 373 aa6.31□□□□□ -1.4
GAPVD1-204ENST00000394083 RNF2Q99496 336 aa6.31□□□□□ -1.4
GAPVD1-204ENST00000394083 FAT2Q9NYQ8 4349 aa6.31□□□□□ -1.4
GAPVD1-204ENST00000394083 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.3□□□□□ -1.4
GAPVD1-204ENST00000394083 ZNF324O75467 553 aaPredicted RBP6.3□□□□□ -1.4
GAPVD1-204ENST00000394083 OR4F17Q8NGA8 305 aa6.3□□□□□ -1.4
GAPVD1-204ENST00000394083 CLEC5AQ9NY25 188 aa6.3□□□□□ -1.4
GAPVD1-204ENST00000394083 TRAV20A0A0B4J274 112 aa6.3□□□□□ -1.4
GAPVD1-204ENST00000394083 SH2D1AO60880 128 aa6.3□□□□□ -1.4
GAPVD1-204ENST00000394083 SLC25A5P05141 298 aaKnown RBP6.3□□□□□ -1.4
GAPVD1-204ENST00000394083 MGST1P10620 155 aaKnown RBP6.3□□□□□ -1.4
GAPVD1-204ENST00000394083 UNQ5815/PRO19632Q6UWF5 114 aa6.3□□□□□ -1.4
GAPVD1-204ENST00000394083 VN1R17PQ8TDU5 208 aa6.3□□□□□ -1.4
GAPVD1-204ENST00000394083 ADARB2-AS1A8MUL3 147 aa6.3□□□□□ -1.4
GAPVD1-204ENST00000394083 RPLP1P05386 114 aaKnown RBP6.3□□□□□ -1.4
GAPVD1-204ENST00000394083 C3orf79P0CE67 100 aa6.3□□□□□ -1.4
GAPVD1-204ENST00000394083 S100PP25815 95 aa6.3□□□□□ -1.4
GAPVD1-204ENST00000394083 DEFB136Q30KP8 78 aa6.3□□□□□ -1.4
GAPVD1-204ENST00000394083 Q6ZVH6 145 aa6.3□□□□□ -1.4
GAPVD1-204ENST00000394083 DUX3Q96PT4 197 aa6.3□□□□□ -1.4
GAPVD1-204ENST00000394083 RPP21Q9H633 154 aaKnown RBP6.3□□□□□ -1.4
GAPVD1-204ENST00000394083 SRD5A1P18405 259 aa6.3□□□□□ -1.4
GAPVD1-204ENST00000394083 TMUB1Q9BVT8 246 aa6.3□□□□□ -1.4
GAPVD1-204ENST00000394083 SNHG12Q9BXW3 62 aa6.3□□□□□ -1.4
GAPVD1-204ENST00000394083 RPEL1Q2QD12 228 aa6.29□□□□□ -1.4
GAPVD1-204ENST00000394083 DMRTA1Q5VZB9 504 aa6.29□□□□□ -1.4
GAPVD1-204ENST00000394083 MORN3Q6PF18 240 aaPredicted RBP6.29□□□□□ -1.4
GAPVD1-204ENST00000394083 ZNF493Q6ZR52 646 aa6.29□□□□□ -1.4
GAPVD1-204ENST00000394083 OR1L4Q8NGR5 311 aa6.29□□□□□ -1.4
GAPVD1-204ENST00000394083 TMEM68Q96MH6 324 aa6.29□□□□□ -1.4
GAPVD1-204ENST00000394083 CRXO43186 299 aaPredicted RBP6.29□□□□□ -1.4
GAPVD1-204ENST00000394083 TIMD4Q96H15 378 aa6.29□□□□□ -1.4
GAPVD1-204ENST00000394083 FMC1Q96HJ9 113 aa6.29□□□□□ -1.4
GAPVD1-204ENST00000394083 RNASE3P12724 160 aaKnown RBP6.29□□□□□ -1.4
GAPVD1-204ENST00000394083 BTF3L4Q96K17 158 aa6.29□□□□□ -1.4
GAPVD1-204ENST00000394083 TRAV41A0A0B4J266 112 aa6.28□□□□□ -1.4
GAPVD1-204ENST00000394083 HAX1O00165 279 aa6.28□□□□□ -1.4
GAPVD1-204ENST00000394083 S100A8P05109 93 aa6.28□□□□□ -1.4
GAPVD1-204ENST00000394083 C9orf139Q6ZV77 190 aa6.28□□□□□ -1.4
GAPVD1-204ENST00000394083 RNF152Q8N8N0 203 aa6.28□□□□□ -1.4
GAPVD1-204ENST00000394083 KIF25-AS1Q9Y6Z4 181 aa6.28□□□□□ -1.4
GAPVD1-204ENST00000394083 LOC102724200A0A096LPH7 203 aaPredicted RBP6.28□□□□□ -1.4
GAPVD1-204ENST00000394083 Q6YL49 198 aa6.28□□□□□ -1.4
GAPVD1-204ENST00000394083 AMN1Q8IY45 258 aa6.28□□□□□ -1.4
GAPVD1-204ENST00000394083 NRACQ8N912 160 aa6.28□□□□□ -1.4
GAPVD1-204ENST00000394083 LINC01546A6NGU7 62 aa6.28□□□□□ -1.4
GAPVD1-204ENST00000394083 ZNF705GA8MUZ8 300 aaPredicted RBP6.28□□□□□ -1.4
GAPVD1-204ENST00000394083 PPP1R2P9O14990 202 aa6.28□□□□□ -1.4
GAPVD1-204ENST00000394083 GRAMD2BQ96HH9 432 aa6.28□□□□□ -1.4
GAPVD1-204ENST00000394083 RAB9AP51151 201 aa6.28□□□□□ -1.4
GAPVD1-204ENST00000394083 LYZL1Q6UWQ5 148 aa6.28□□□□□ -1.4
GAPVD1-204ENST00000394083 AMTNQ6UX39 209 aa6.28□□□□□ -1.4
GAPVD1-204ENST00000394083 Q8N2B8 174 aa6.28□□□□□ -1.4
GAPVD1-204ENST00000394083 GNG7O60262 68 aa6.27□□□□□ -1.41
GAPVD1-204ENST00000394083 MFAP4P55083 255 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 150.8 ms