RNA–Protein interactions for RNA: ENST00000394055.7

CDH16-202, Transcript of cadherin 16, humanhuman

TSL 1 (best) BASIC

Gene CDH16, Length 2,821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16-202ENST00000394055 G3V4G9 280 aa11.4□□□□□ -0.59
CDH16-202ENST00000394055 ZNF207O43670 478 aaKnown RBP11.4□□□□□ -0.59
CDH16-202ENST00000394055 DOPEY1Q5JWR5 2465 aa11.39□□□□□ -0.59
CDH16-202ENST00000394055 UTP20O75691 2785 aaKnown RBP11.39□□□□□ -0.59
CDH16-202ENST00000394055 C3orf79P0CE67 100 aa11.39□□□□□ -0.59
CDH16-202ENST00000394055 PAX8Q06710 450 aa11.39□□□□□ -0.59
CDH16-202ENST00000394055 KLF5Q13887 457 aaPredicted RBP11.39□□□□□ -0.59
CDH16-202ENST00000394055 PMCHL1Q16048 86 aa11.39□□□□□ -0.59
CDH16-202ENST00000394055 ZFYVE26Q68DK2 2539 aa11.39□□□□□ -0.59
CDH16-202ENST00000394055 MYO18BQ8IUG5 2567 aa11.39□□□□□ -0.59
CDH16-202ENST00000394055 APOHP02749 345 aaPredicted RBP11.39□□□□□ -0.59
CDH16-202ENST00000394055 CT45A10P0DMU9 189 aa11.39□□□□□ -0.59
CDH16-202ENST00000394055 ATP5J2P56134 94 aa11.39□□□□□ -0.59
CDH16-202ENST00000394055 PSG9Q00887 426 aa11.39□□□□□ -0.59
CDH16-202ENST00000394055 OR1N2Q8NGR9 330 aa11.39□□□□□ -0.59
CDH16-202ENST00000394055 CRYBG3Q68DQ2 2970 aa11.39□□□□□ -0.59
CDH16-202ENST00000394055 IGHV1-69DA0A0B4J2H0 117 aa11.38□□□□□ -0.59
CDH16-202ENST00000394055 M0R2Z0 102 aa11.38□□□□□ -0.59
CDH16-202ENST00000394055 IGHV1-69P01742 117 aa11.38□□□□□ -0.59
CDH16-202ENST00000394055 IGHV4-38-2P0DP08 117 aa11.38□□□□□ -0.59
CDH16-202ENST00000394055 FER1L6-AS1Q8NA97 138 aa11.38□□□□□ -0.59
CDH16-202ENST00000394055 VGLL1Q99990 258 aa11.38□□□□□ -0.59
CDH16-202ENST00000394055 SMPXQ9UHP9 88 aa11.38□□□□□ -0.59
CDH16-202ENST00000394055 IGHV4-30-2A0A087WSY4 118 aa11.38□□□□□ -0.59
CDH16-202ENST00000394055 LY6EQ16553 131 aa11.38□□□□□ -0.59
CDH16-202ENST00000394055 NRGNQ92686 78 aa11.38□□□□□ -0.59
CDH16-202ENST00000394055 BORCS7Q96B45 105 aa11.38□□□□□ -0.59
CDH16-202ENST00000394055 URB1-AS1Q96HZ7 61 aa11.38□□□□□ -0.59
CDH16-202ENST00000394055 ZFAND3Q9H8U3 227 aa11.38□□□□□ -0.59
CDH16-202ENST00000394055 MUC21A0A0G2JKD1 596 aa11.37□□□□□ -0.59
CDH16-202ENST00000394055 MUC21A0A140T8X8 626 aa11.37□□□□□ -0.59
CDH16-202ENST00000394055 FAM231BA6NCW3 169 aa11.37□□□□□ -0.59
CDH16-202ENST00000394055 MUC21Q5SSG8 566 aa11.37□□□□□ -0.59
CDH16-202ENST00000394055 LCN12Q6JVE5 192 aa11.37□□□□□ -0.59
CDH16-202ENST00000394055 C10orf105Q8TEF2 133 aa11.37□□□□□ -0.59
CDH16-202ENST00000394055 A0A1B0GUT8 65 aa11.37□□□□□ -0.59
CDH16-202ENST00000394055 CELSR2Q9HCU4 2923 aa11.37□□□□□ -0.59
CDH16-202ENST00000394055 SH2D1AO60880 128 aa11.36□□□□□ -0.59
CDH16-202ENST00000394055 IGHG4P01861 327 aa11.36□□□□□ -0.59
CDH16-202ENST00000394055 ZNF138P52744 262 aa11.36□□□□□ -0.59
CDH16-202ENST00000394055 MPV17L2Q567V2 206 aa11.36□□□□□ -0.59
CDH16-202ENST00000394055 RNF182Q8N6D2 247 aa11.36□□□□□ -0.59
CDH16-202ENST00000394055 PIFOQ8TCI5 191 aa11.36□□□□□ -0.59
CDH16-202ENST00000394055 MOB4Q9Y3A3 225 aa11.36□□□□□ -0.59
CDH16-202ENST00000394055 HAX1O00165 279 aa11.36□□□□□ -0.59
CDH16-202ENST00000394055 EEF1AKMT3Q96AZ1 226 aa11.36□□□□□ -0.59
CDH16-202ENST00000394055 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.36□□□□□ -0.596e-12■■■■□ 24.4
CDH16-202ENST00000394055 SERTM2A0A1B0GWG4 89 aa11.36□□□□□ -0.59
CDH16-202ENST00000394055 CLPSL1A2RUU4 121 aa11.35□□□□□ -0.59
CDH16-202ENST00000394055 BUB3O43684 328 aa11.35□□□□□ -0.59
CDH16-202ENST00000394055 PRR25Q96S07 402 aa11.35□□□□□ -0.59
CDH16-202ENST00000394055 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.35□□□□□ -0.59
CDH16-202ENST00000394055 TRAV41A0A0B4J266 112 aa11.35□□□□□ -0.59
CDH16-202ENST00000394055 FAM181BA6NEQ2 426 aa11.35□□□□□ -0.59
CDH16-202ENST00000394055 PRAC2D3DTV9 90 aa11.35□□□□□ -0.59
CDH16-202ENST00000394055 CSN3P07498 182 aa11.35□□□□□ -0.59
CDH16-202ENST00000394055 ERCC8Q13216 396 aa11.35□□□□□ -0.59
CDH16-202ENST00000394055 EBLN2Q6P2I7 272 aa11.35□□□□□ -0.59
CDH16-202ENST00000394055 CSMD2Q7Z408 3487 aa11.34□□□□□ -0.59
CDH16-202ENST00000394055 TMEM189A5PLL7 270 aa11.34□□□□□ -0.59
CDH16-202ENST00000394055 ZNF80P51504 273 aaPredicted RBP11.34□□□□□ -0.59
CDH16-202ENST00000394055 DEFB125Q8N687 156 aa11.34□□□□□ -0.59
CDH16-202ENST00000394055 ATP6V0BQ99437 205 aa11.34□□□□□ -0.59
CDH16-202ENST00000394055 SCGB1A1P11684 91 aa11.34□□□□□ -0.59
CDH16-202ENST00000394055 RIGQ13278 110 aa11.34□□□□□ -0.59
CDH16-202ENST00000394055 TMEM190Q8WZ59 177 aa11.34□□□□□ -0.59
CDH16-202ENST00000394055 PRB1P04280 392 aa11.33□□□□□ -0.6
CDH16-202ENST00000394055 ATP5G2Q06055 141 aa11.33□□□□□ -0.6
CDH16-202ENST00000394055 FAM162BQ5T6X4 162 aa11.33□□□□□ -0.6
CDH16-202ENST00000394055 LYZL1Q6UWQ5 148 aa11.33□□□□□ -0.6
CDH16-202ENST00000394055 TRAV9-2A0A087WT02 112 aa11.33□□□□□ -0.6
CDH16-202ENST00000394055 NUDT3O95989 172 aa11.33□□□□□ -0.6
CDH16-202ENST00000394055 TRGV3P03979 118 aa11.33□□□□□ -0.6
CDH16-202ENST00000394055 TIMM8BQ9Y5J9 83 aaPredicted RBP11.33□□□□□ -0.6
CDH16-202ENST00000394055 CSPG4Q6UVK1 2322 aa11.33□□□□□ -0.6
CDH16-202ENST00000394055 FAM208BQ5VWN6 2430 aa11.33□□□□□ -0.6
CDH16-202ENST00000394055 TRAV8-6A0A0B4J262 113 aa11.32□□□□□ -0.6
CDH16-202ENST00000394055 TMEM213A2RRL7 107 aa11.32□□□□□ -0.6
CDH16-202ENST00000394055 H3BUX3 64 aa11.32□□□□□ -0.6
CDH16-202ENST00000394055 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.32□□□□□ -0.6
CDH16-202ENST00000394055 TRBV7-1A0A0A6YYK4 115 aa11.32□□□□□ -0.6
CDH16-202ENST00000394055 IGLL1P15814 213 aa11.32□□□□□ -0.6
CDH16-202ENST00000394055 LINC00173Q6ZV60 143 aa11.32□□□□□ -0.6
CDH16-202ENST00000394055 GAGE10A6NGK3 116 aa11.31□□□□□ -0.6
CDH16-202ENST00000394055 AZU1P20160 251 aa11.31□□□□□ -0.6
CDH16-202ENST00000394055 BVES-AS1Q5T3Y7 98 aa11.31□□□□□ -0.6
CDH16-202ENST00000394055 NDFIP1Q9BT67 221 aa11.31□□□□□ -0.6
CDH16-202ENST00000394055 IGHV1-24A0A0C4DH33 117 aa11.31□□□□□ -0.6
CDH16-202ENST00000394055 TRBV12-3P01733 135 aa11.31□□□□□ -0.6
CDH16-202ENST00000394055 KLK9Q2XQG4 91 aa11.31□□□□□ -0.6
CDH16-202ENST00000394055 SPATA12Q7Z6I5 190 aa11.31□□□□□ -0.6
CDH16-202ENST00000394055 METTL26Q96S19 204 aa11.31□□□□□ -0.6
CDH16-202ENST00000394055 PEF1Q9UBV8 284 aaKnown RBP11.31□□□□□ -0.6
CDH16-202ENST00000394055 KLK9Q9UKQ9 250 aa11.31□□□□□ -0.6
CDH16-202ENST00000394055 POLQO75417 2590 aa11.31□□□□□ -0.6
CDH16-202ENST00000394055 TRAV26-1A0A087WT03 109 aa11.31□□□□□ -0.6
CDH16-202ENST00000394055 MSMBP08118 114 aa11.31□□□□□ -0.6
CDH16-202ENST00000394055 RAB9AP51151 201 aa11.31□□□□□ -0.6
CDH16-202ENST00000394055 CRYBA4P53673 196 aa11.31□□□□□ -0.6
CDH16-202ENST00000394055 SMAGPQ0VAQ4 97 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms