RNA–Protein interactions for RNA: ENST00000393459.5

SFXN3-202, Transcript of sideroflexin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SFXN3, Length 3,098 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-202ENST00000393459 GLMPQ8WWB7 406 aa11.43□□□□□ -0.58
SFXN3-202ENST00000393459 RAB9BQ9NP90 201 aa11.43□□□□□ -0.58
SFXN3-202ENST00000393459 ZNF492Q9P255 531 aa11.43□□□□□ -0.58
SFXN3-202ENST00000393459 IGKV3-7A0A075B6H7 116 aa11.42□□□□□ -0.58
SFXN3-202ENST00000393459 IGFL2Q6UWQ7 119 aa11.42□□□□□ -0.58
SFXN3-202ENST00000393459 PPP1R27Q86WC6 154 aa11.42□□□□□ -0.58
SFXN3-202ENST00000393459 THAP8Q8NA92 274 aa11.42□□□□□ -0.58
SFXN3-202ENST00000393459 SPAG8Q99932 426 aaPredicted RBP11.42□□□□□ -0.58
SFXN3-202ENST00000393459 MRPL35Q9NZE8 188 aaKnown RBP11.42□□□□□ -0.58
SFXN3-202ENST00000393459 CRYBG3Q68DQ2 2970 aa11.42□□□□□ -0.58
SFXN3-202ENST00000393459 TRBV19A0A075B6N1 114 aa11.42□□□□□ -0.58
SFXN3-202ENST00000393459 TRAV26-1A0A087WT03 109 aa11.42□□□□□ -0.58
SFXN3-202ENST00000393459 PRRG2O14669 202 aa11.42□□□□□ -0.58
SFXN3-202ENST00000393459 SCGB2A2Q13296 93 aa11.42□□□□□ -0.58
SFXN3-202ENST00000393459 DYNLRB1Q9NP97 96 aa11.42□□□□□ -0.58
SFXN3-202ENST00000393459 LINC01548A6NM66 108 aa11.41□□□□□ -0.58
SFXN3-202ENST00000393459 C16orf54Q6UWD8 224 aa11.41□□□□□ -0.58
SFXN3-202ENST00000393459 AAMDCQ9H7C9 122 aa11.41□□□□□ -0.58
SFXN3-202ENST00000393459 PLSCR4Q9NRQ2 329 aa11.41□□□□□ -0.58
SFXN3-202ENST00000393459 NACAE9PAV3 2078 aa11.41□□□□□ -0.58
SFXN3-202ENST00000393459 CSPG4Q6UVK1 2322 aa11.41□□□□□ -0.58
SFXN3-202ENST00000393459 TRAV17A0A0B4J275 112 aa11.41□□□□□ -0.58
SFXN3-202ENST00000393459 CCDC144NLQ6NUI1 221 aa11.41□□□□□ -0.58
SFXN3-202ENST00000393459 SIGLEC15Q6ZMC9 328 aa11.41□□□□□ -0.58
SFXN3-202ENST00000393459 SOX21Q9Y651 276 aaPredicted RBP11.41□□□□□ -0.58
SFXN3-202ENST00000393459 NCBP2LA6PVI3 153 aaKnown RBP11.41□□□□□ -0.58
SFXN3-202ENST00000393459 H3BVH4 76 aa11.41□□□□□ -0.58
SFXN3-202ENST00000393459 IGHG3P01860 377 aa11.41□□□□□ -0.58
SFXN3-202ENST00000393459 CKS1BP61024 79 aa11.41□□□□□ -0.58
SFXN3-202ENST00000393459 RNF125Q96EQ8 232 aa11.41□□□□□ -0.58
SFXN3-202ENST00000393459 SIGLEC9Q9Y336 463 aa11.41□□□□□ -0.58
SFXN3-202ENST00000393459 K7EM74 188 aa11.4□□□□□ -0.58
SFXN3-202ENST00000393459 TRGV3P03979 118 aa11.4□□□□□ -0.58
SFXN3-202ENST00000393459 CD40P25942 277 aa11.4□□□□□ -0.58
SFXN3-202ENST00000393459 RPEQ96AT9 228 aa11.4□□□□□ -0.58
SFXN3-202ENST00000393459 TRGV9Q99603 122 aa11.4□□□□□ -0.58
SFXN3-202ENST00000393459 SCNM1Q9BWG6 230 aa11.4□□□□□ -0.58
SFXN3-202ENST00000393459 APOMO95445 188 aa11.4□□□□□ -0.58
SFXN3-202ENST00000393459 CT83Q5H943 113 aa11.4□□□□□ -0.58
SFXN3-202ENST00000393459 GFRA4Q9GZZ7 299 aa11.4□□□□□ -0.58
SFXN3-202ENST00000393459 ONECUT1Q9UBC0 465 aa11.4□□□□□ -0.58
SFXN3-202ENST00000393459 OVOL3O00110 214 aa11.39□□□□□ -0.59
SFXN3-202ENST00000393459 NBL1P41271 181 aa11.39□□□□□ -0.59
SFXN3-202ENST00000393459 DEFB1P60022 68 aa11.39□□□□□ -0.59
SFXN3-202ENST00000393459 MRGPRG-AS1Q2M3A8 158 aa11.39□□□□□ -0.59
SFXN3-202ENST00000393459 LGALS9BQ3B8N2 356 aa11.39□□□□□ -0.59
SFXN3-202ENST00000393459 LGALS9CQ6DKI2 356 aa11.39□□□□□ -0.59
SFXN3-202ENST00000393459 COL25A1Q9BXS0 654 aaPredicted RBP11.39□□□□□ -0.59
SFXN3-202ENST00000393459 HIF1ANQ9NWT6 349 aa11.39□□□□□ -0.59
SFXN3-202ENST00000393459 H7C2G1 150 aa11.39□□□□□ -0.59
SFXN3-202ENST00000393459 ZNF562Q6V9R5 426 aa11.39□□□□□ -0.59
SFXN3-202ENST00000393459 OR4X2Q8NGF9 303 aa11.39□□□□□ -0.59
SFXN3-202ENST00000393459 WI2-2373I1.2A0A1W2PRP0 233 aa11.39□□□□□ -0.59
SFXN3-202ENST00000393459 BSPH1Q075Z2 132 aa11.39□□□□□ -0.59
SFXN3-202ENST00000393459 KLRD1Q13241 179 aa11.39□□□□□ -0.59
SFXN3-202ENST00000393459 OR5A1Q8NGJ0 315 aa11.39□□□□□ -0.59
SFXN3-202ENST00000393459 OR9G4Q8NGQ1 327 aa11.39□□□□□ -0.59
SFXN3-202ENST00000393459 SETD2Q9BYW2 2564 aaPredicted RBP11.38□□□□□ -0.59
SFXN3-202ENST00000393459 PRAC2D3DTV9 90 aa11.38□□□□□ -0.59
SFXN3-202ENST00000393459 IGKCP01834 107 aa11.38□□□□□ -0.59
SFXN3-202ENST00000393459 RPS20P60866 119 aaKnown RBP11.38□□□□□ -0.59
SFXN3-202ENST00000393459 MAP1LC3AQ9H492 121 aa11.38□□□□□ -0.59
SFXN3-202ENST00000393459 CUL9Q8IWT3 2517 aa11.38□□□□□ -0.59
SFXN3-202ENST00000393459 TNFRSF6BO95407 300 aa11.37□□□□□ -0.59
SFXN3-202ENST00000393459 IGHV1-8P0DP01 117 aa11.37□□□□□ -0.59
SFXN3-202ENST00000393459 ZNF491Q8N8L2 437 aa11.37□□□□□ -0.59
SFXN3-202ENST00000393459 LOXP28300 417 aaPredicted RBP11.37□□□□□ -0.59
SFXN3-202ENST00000393459 ODF1Q14990 250 aa11.37□□□□□ -0.59
SFXN3-202ENST00000393459 IGLL5B9A064 214 aa11.36□□□□□ -0.59
SFXN3-202ENST00000393459 TM4SF5O14894 197 aa11.36□□□□□ -0.59
SFXN3-202ENST00000393459 TIMM23O14925 209 aa11.36□□□□□ -0.59
SFXN3-202ENST00000393459 CEACAM4O75871 244 aa11.36□□□□□ -0.59
SFXN3-202ENST00000393459 PSMB2P49721 201 aa11.36□□□□□ -0.59
SFXN3-202ENST00000393459 SYT8Q8NBV8 401 aa11.36□□□□□ -0.59
SFXN3-202ENST00000393459 ZNF502Q8TBZ5 544 aa11.36□□□□□ -0.59
SFXN3-202ENST00000393459 VKORC1Q9BQB6 163 aa11.36□□□□□ -0.59
SFXN3-202ENST00000393459 NCOR2Q9Y618 2525 aa11.36□□□□□ -0.59
SFXN3-202ENST00000393459 IGLV3-9A0A075B6K5 115 aa11.36□□□□□ -0.59
SFXN3-202ENST00000393459 C17orf100A8MU93 164 aa11.36□□□□□ -0.59
SFXN3-202ENST00000393459 GATA3P23771 443 aa11.36□□□□□ -0.59
SFXN3-202ENST00000393459 ADIPOQQ15848 244 aa11.36□□□□□ -0.59
SFXN3-202ENST00000393459 CD300EQ496F6 205 aaPredicted RBP11.36□□□□□ -0.59
SFXN3-202ENST00000393459 FAM215AQ9Y5M1 114 aa11.36□□□□□ -0.59
SFXN3-202ENST00000393459 CENPEQ02224 2701 aa11.36□□□□□ -0.59
SFXN3-202ENST00000393459 IGHV1-3A0A0C4DH29 117 aa11.35□□□□□ -0.59
SFXN3-202ENST00000393459 TEX22C9J3V5 150 aa11.35□□□□□ -0.59
SFXN3-202ENST00000393459 SMIM17P0DL12 118 aa11.35□□□□□ -0.59
SFXN3-202ENST00000393459 GAGE13Q4V321 117 aa11.35□□□□□ -0.59
SFXN3-202ENST00000393459 HHLA3Q9XRX5 114 aa11.35□□□□□ -0.59
SFXN3-202ENST00000393459 SCGB1D4Q6XE38 83 aa11.35□□□□□ -0.59
SFXN3-202ENST00000393459 TNFRSF14Q92956 283 aa11.35□□□□□ -0.59
SFXN3-202ENST00000393459 ATP6V0BQ99437 205 aa11.35□□□□□ -0.59
SFXN3-202ENST00000393459 SPANXB1Q9NS25 103 aaPredicted RBP11.35□□□□□ -0.59
SFXN3-202ENST00000393459 HLA-DRB4P13762 266 aa11.34□□□□□ -0.59
SFXN3-202ENST00000393459 C12orf74Q32Q52 190 aa11.34□□□□□ -0.59
SFXN3-202ENST00000393459 IL17RELQ6ZVW7 336 aa11.34□□□□□ -0.59
SFXN3-202ENST00000393459 CEND1Q8N111 149 aa11.34□□□□□ -0.59
SFXN3-202ENST00000393459 KLHL30-AS1Q8NEE0 82 aa11.34□□□□□ -0.59
SFXN3-202ENST00000393459 C1orf162Q8NEQ5 155 aaPredicted RBP11.34□□□□□ -0.59
SFXN3-202ENST00000393459 MRPL16Q9NX20 251 aaKnown RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms