RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 OR10J3Q5JRS4 329 aa11.47□□□□□ -0.57
MKS1-202ENST00000393119 PRNTQ86SH4 94 aa11.47□□□□□ -0.57
MKS1-202ENST00000393119 C5orf17Q8NAS9 161 aa11.47□□□□□ -0.57
MKS1-202ENST00000393119 ESM1Q9NQ30 184 aa11.47□□□□□ -0.57
MKS1-202ENST00000393119 OTORQ9NRC9 128 aa11.47□□□□□ -0.57
MKS1-202ENST00000393119 UBE2G1P62253 170 aa11.47□□□□□ -0.57
MKS1-202ENST00000393119 BAGE3Q86Y29 109 aa11.47□□□□□ -0.57
MKS1-202ENST00000393119 FOXC2Q99958 501 aa11.47□□□□□ -0.57
MKS1-202ENST00000393119 SAMD10Q9BYL1 202 aa11.47□□□□□ -0.57
MKS1-202ENST00000393119 NRN1Q9NPD7 142 aa11.47□□□□□ -0.57
MKS1-202ENST00000393119 SERTAD4Q9NUC0 356 aa11.47□□□□□ -0.57
MKS1-202ENST00000393119 IGKV3-7A0A075B6H7 116 aa11.46□□□□□ -0.57
MKS1-202ENST00000393119 IGKV2-40A0A087WW87 121 aaPredicted RBP11.46□□□□□ -0.57
MKS1-202ENST00000393119 C20orf202A1L168 122 aa11.46□□□□□ -0.57
MKS1-202ENST00000393119 IGKV2D-40P01614 121 aaPredicted RBP11.46□□□□□ -0.57
MKS1-202ENST00000393119 TM4SF20Q53R12 229 aa11.46□□□□□ -0.57
MKS1-202ENST00000393119 ZNF785A8K8V0 405 aa11.46□□□□□ -0.58
MKS1-202ENST00000393119 ZNF253O75346 499 aa11.46□□□□□ -0.58
MKS1-202ENST00000393119 PTTG1IPP53801 180 aa11.46□□□□□ -0.58
MKS1-202ENST00000393119 COTL1Q14019 142 aa11.46□□□□□ -0.58
MKS1-202ENST00000393119 NIT1Q86X76 327 aa11.46□□□□□ -0.58
MKS1-202ENST00000393119 KCNS1Q96KK3 526 aa11.46□□□□□ -0.58
MKS1-202ENST00000393119 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.45□□□□□ -0.58
MKS1-202ENST00000393119 A0A1W2PS18 150 aa11.45□□□□□ -0.58
MKS1-202ENST00000393119 PRAC2D3DTV9 90 aa11.45□□□□□ -0.58
MKS1-202ENST00000393119 MRPS16Q9Y3D3 137 aaKnown RBP11.45□□□□□ -0.58
MKS1-202ENST00000393119 FAM181BA6NEQ2 426 aa11.45□□□□□ -0.58
MKS1-202ENST00000393119 SNURFLB1AK76 121 aa11.45□□□□□ -0.58
MKS1-202ENST00000393119 MT-ND6P03923 174 aa11.45□□□□□ -0.58
MKS1-202ENST00000393119 DEFB1P60022 68 aa11.45□□□□□ -0.58
MKS1-202ENST00000393119 UBE2V1Q13404 147 aa11.45□□□□□ -0.58
MKS1-202ENST00000393119 IBA57Q5T440 356 aaKnown RBP11.45□□□□□ -0.58
MKS1-202ENST00000393119 RCHY1Q96PM5 261 aa11.45□□□□□ -0.58
MKS1-202ENST00000393119 KLF12Q9Y4X4 402 aa11.45□□□□□ -0.58
MKS1-202ENST00000393119 RPL7P18124 248 aaKnown RBP11.44□□□□□ -0.58
MKS1-202ENST00000393119 SRD5A1P18405 259 aa11.44□□□□□ -0.58
MKS1-202ENST00000393119 KRTDAPP60985 99 aa11.44□□□□□ -0.58
MKS1-202ENST00000393119 TMEM136Q6ZRR5 245 aa11.44□□□□□ -0.58
MKS1-202ENST00000393119 NUDT10Q8NFP7 164 aa11.44□□□□□ -0.58
MKS1-202ENST00000393119 NUDT11Q96G61 164 aa11.44□□□□□ -0.58
MKS1-202ENST00000393119 PRSS22Q9GZN4 317 aa11.44□□□□□ -0.58
MKS1-202ENST00000393119 COX11Q9Y6N1 276 aa11.44□□□□□ -0.58
MKS1-202ENST00000393119 SCGB2A1O75556 95 aa11.43□□□□□ -0.58
MKS1-202ENST00000393119 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.43□□□□□ -0.58
MKS1-202ENST00000393119 Q8TAT8 98 aa11.43□□□□□ -0.58
MKS1-202ENST00000393119 USMG5Q96IX5 58 aa11.43□□□□□ -0.58
MKS1-202ENST00000393119 C8orf49Q96NF6 230 aa11.43□□□□□ -0.58
MKS1-202ENST00000393119 METTL26Q96S19 204 aa11.43□□□□□ -0.58
MKS1-202ENST00000393119 ZNF324O75467 553 aaPredicted RBP11.43□□□□□ -0.58
MKS1-202ENST00000393119 C3orf79P0CE67 100 aa11.43□□□□□ -0.58
MKS1-202ENST00000393119 SRSF2Q01130 221 aaKnown RBP11.43□□□□□ -0.58
MKS1-202ENST00000393119 ERCC8Q13216 396 aa11.43□□□□□ -0.58
MKS1-202ENST00000393119 RPEL1Q2QD12 228 aa11.43□□□□□ -0.58
MKS1-202ENST00000393119 DEFB136Q30KP8 78 aa11.43□□□□□ -0.58
MKS1-202ENST00000393119 C11orf44Q8N8P7 122 aa11.43□□□□□ -0.58
MKS1-202ENST00000393119 DUX3Q96PT4 197 aa11.43□□□□□ -0.58
MKS1-202ENST00000393119 VGLL1Q99990 258 aa11.43□□□□□ -0.58
MKS1-202ENST00000393119 MLST8Q9BVC4 326 aa11.43□□□□□ -0.58
MKS1-202ENST00000393119 DNAJC9-AS1A6NH13 148 aa11.42□□□□□ -0.58
MKS1-202ENST00000393119 LTAP01374 205 aa11.42□□□□□ -0.58
MKS1-202ENST00000393119 TSPOP30536 169 aa11.42□□□□□ -0.58
MKS1-202ENST00000393119 HNRNPA3P51991 378 aaKnown RBP11.42□□□□□ -0.58
MKS1-202ENST00000393119 Q6ZN92 141 aa11.42□□□□□ -0.58
MKS1-202ENST00000393119 Q86TA4 180 aa11.42□□□□□ -0.58
MKS1-202ENST00000393119 GPR82Q96P67 336 aa11.42□□□□□ -0.58
MKS1-202ENST00000393119 AMTP48728 403 aa11.42□□□□□ -0.58
MKS1-202ENST00000393119 COX19Q49B96 90 aa11.42□□□□□ -0.58
MKS1-202ENST00000393119 WDR73Q6P4I2 378 aa11.42□□□□□ -0.58
MKS1-202ENST00000393119 NPFFR1Q9GZQ6 430 aa11.42□□□□□ -0.58
MKS1-202ENST00000393119 TRAV8-2A0A0B4J237 113 aa11.41□□□□□ -0.58
MKS1-202ENST00000393119 H3BUA1 57 aa11.41□□□□□ -0.58
MKS1-202ENST00000393119 ZNF331Q9NQX6 463 aaPredicted RBP11.41□□□□□ -0.58
MKS1-202ENST00000393119 U3KQE9 123 aa11.41□□□□□ -0.58
MKS1-202ENST00000393119 NIPBLQ6KC79 2804 aaeCLIP11.41□□□□□ -0.58
MKS1-202ENST00000393119 CHEK1O14757 476 aa11.41□□□□□ -0.58
MKS1-202ENST00000393119 CD5LO43866 347 aa11.41□□□□□ -0.58
MKS1-202ENST00000393119 RPL19P84098 196 aaKnown RBP11.41□□□□□ -0.58
MKS1-202ENST00000393119 OR2D3Q8NGH3 330 aa11.41□□□□□ -0.58
MKS1-202ENST00000393119 ZC2HC1AQ96GY0 325 aa11.41□□□□□ -0.58
MKS1-202ENST00000393119 PEF1Q9UBV8 284 aaKnown RBP11.41□□□□□ -0.58
MKS1-202ENST00000393119 TCTEX1D4Q5JR98 221 aa11.4□□□□□ -0.58
MKS1-202ENST00000393119 GPHB5Q86YW7 130 aa11.4□□□□□ -0.58
MKS1-202ENST00000393119 KLHDC1Q8N7A1 406 aa11.4□□□□□ -0.58
MKS1-202ENST00000393119 FMC1Q96HJ9 113 aa11.4□□□□□ -0.58
MKS1-202ENST00000393119 AAMDCQ9H7C9 122 aa11.4□□□□□ -0.58
MKS1-202ENST00000393119 PSG8Q9UQ74 426 aa11.4□□□□□ -0.58
MKS1-202ENST00000393119 FLNBO75369 2602 aaKnown RBP11.4□□□□□ -0.58
MKS1-202ENST00000393119 A0A0G2JLM5 398 aa11.4□□□□□ -0.58
MKS1-202ENST00000393119 PPBPP02775 128 aa11.4□□□□□ -0.58
MKS1-202ENST00000393119 CRIP1P50238 77 aa11.4□□□□□ -0.58
MKS1-202ENST00000393119 OSTCQ9NRP0 149 aa11.4□□□□□ -0.58
MKS1-202ENST00000393119 NDUFA4O00483 81 aa11.39□□□□□ -0.59
MKS1-202ENST00000393119 BRI3O95415 125 aa11.39□□□□□ -0.59
MKS1-202ENST00000393119 RPL11P62913 178 aaKnown RBP11.39□□□□□ -0.59
MKS1-202ENST00000393119 PSG3Q16557 428 aa11.39□□□□□ -0.59
MKS1-202ENST00000393119 LCN12Q6JVE5 192 aa11.39□□□□□ -0.59
MKS1-202ENST00000393119 ZNF738Q8NE65 137 aa11.39□□□□□ -0.59
MKS1-202ENST00000393119 TSKUQ8WUA8 353 aa11.39□□□□□ -0.59
MKS1-202ENST00000393119 C20orf173Q96LM9 149 aa11.39□□□□□ -0.59
MKS1-202ENST00000393119 NAT8BQ9UHF3 227 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms