RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 UBE2E2Q96LR5 201 aa10.51□□□□□ -0.73
LCA5-202ENST00000392959 LOXP28300 417 aaPredicted RBP10.51□□□□□ -0.73
LCA5-202ENST00000392959 ZNF134P52741 427 aa10.51□□□□□ -0.73
LCA5-202ENST00000392959 NSUN5P1Q3KNT7 163 aa10.51□□□□□ -0.73
LCA5-202ENST00000392959 C1orf122Q6ZSJ8 110 aa10.51□□□□□ -0.73
LCA5-202ENST00000392959 NEGR1Q7Z3B1 354 aa10.51□□□□□ -0.73
LCA5-202ENST00000392959 LINC00311Q8N616 119 aa10.51□□□□□ -0.73
LCA5-202ENST00000392959 C9orf118A6NHY6 69 aa10.5□□□□□ -0.73
LCA5-202ENST00000392959 LEPROTO15243 131 aa10.5□□□□□ -0.73
LCA5-202ENST00000392959 MMP23AO75900 390 aa10.5□□□□□ -0.73
LCA5-202ENST00000392959 COX8AP10176 69 aa10.5□□□□□ -0.73
LCA5-202ENST00000392959 LGALS9BQ3B8N2 356 aa10.5□□□□□ -0.73
LCA5-202ENST00000392959 LGALS9CQ6DKI2 356 aa10.5□□□□□ -0.73
LCA5-202ENST00000392959 HELZP42694 1942 aaKnown RBP10.5□□□□□ -0.73
LCA5-202ENST00000392959 DKK1O94907 266 aa10.5□□□□□ -0.73
LCA5-202ENST00000392959 SYNJ2BPP57105 145 aa10.5□□□□□ -0.73
LCA5-202ENST00000392959 DTX1Q86Y01 620 aa10.5□□□□□ -0.73
LCA5-202ENST00000392959 SLC25A16P16260 332 aa10.5□□□□□ -0.73
LCA5-202ENST00000392959 UBE2E1P51965 193 aa10.5□□□□□ -0.73
LCA5-202ENST00000392959 ETDBQ3ZM63 59 aa10.5□□□□□ -0.73
LCA5-202ENST00000392959 TMEM14CQ9P0S9 112 aa10.5□□□□□ -0.73
LCA5-202ENST00000392959 PRR20EP86478 221 aa10.5□□□□□ -0.73
LCA5-202ENST00000392959 PRR20CP86479 221 aa10.5□□□□□ -0.73
LCA5-202ENST00000392959 PRR20DP86480 221 aa10.5□□□□□ -0.73
LCA5-202ENST00000392959 PRR20BP86481 221 aa10.5□□□□□ -0.73
LCA5-202ENST00000392959 PRR20AP86496 221 aa10.5□□□□□ -0.73
LCA5-202ENST00000392959 LAMTOR3Q9UHA4 124 aa10.5□□□□□ -0.73
LCA5-202ENST00000392959 DEFB131AP59861 70 aa10.49□□□□□ -0.73
LCA5-202ENST00000392959 C1QTNF4Q9BXJ3 329 aa10.49□□□□□ -0.73
LCA5-202ENST00000392959 LY6G6EA0A0G2JKS1 128 aa10.49□□□□□ -0.73
LCA5-202ENST00000392959 G3V318 75 aa10.49□□□□□ -0.73
LCA5-202ENST00000392959 U3KQA8 63 aa10.49□□□□□ -0.73
LCA5-202ENST00000392959 PCNX2A6NKB5 2137 aa10.49□□□□□ -0.73
LCA5-202ENST00000392959 POU2AF1Q16633 256 aa10.49□□□□□ -0.73
LCA5-202ENST00000392959 Q8NFD4 153 aa10.49□□□□□ -0.73
LCA5-202ENST00000392959 OVOL2Q9BRP0 275 aa10.49□□□□□ -0.73
LCA5-202ENST00000392959 TPSG1Q9NRR2 321 aa10.49□□□□□ -0.73
LCA5-202ENST00000392959 SIGLEC8Q9NYZ4 499 aa10.49□□□□□ -0.73
LCA5-202ENST00000392959 PLXNA4Q9HCM2 1894 aa10.48□□□□□ -0.73
LCA5-202ENST00000392959 TRBV20-1A0A075B6N2 111 aa10.48□□□□□ -0.73
LCA5-202ENST00000392959 PMVKQ15126 192 aa10.48□□□□□ -0.73
LCA5-202ENST00000392959 KLHL30-AS1Q8NEE0 82 aa10.48□□□□□ -0.73
LCA5-202ENST00000392959 FXYD5Q96DB9 178 aa10.48□□□□□ -0.73
LCA5-202ENST00000392959 IGLV3-9A0A075B6K5 115 aa10.48□□□□□ -0.73
LCA5-202ENST00000392959 KNCNA6PVL3 124 aa10.48□□□□□ -0.73
LCA5-202ENST00000392959 ZNF625Q96I27 306 aaPredicted RBP10.48□□□□□ -0.73
LCA5-202ENST00000392959 TSC2P49815 1807 aa10.48□□□□□ -0.73
LCA5-202ENST00000392959 DYSFO75923 2080 aa10.48□□□□□ -0.73
LCA5-202ENST00000392959 NOTCH2Q04721 2471 aa10.48□□□□□ -0.73
LCA5-202ENST00000392959 H3BRN7 92 aa10.48□□□□□ -0.73
LCA5-202ENST00000392959 RHODO00212 210 aa10.48□□□□□ -0.73
LCA5-202ENST00000392959 IGLC1P0CG04 106 aa10.48□□□□□ -0.73
LCA5-202ENST00000392959 RPL35AP18077 110 aaKnown RBP10.48□□□□□ -0.73
LCA5-202ENST00000392959 GNLYP22749 145 aa10.48□□□□□ -0.73
LCA5-202ENST00000392959 COL4A6Q14031 1691 aa10.48□□□□□ -0.73
LCA5-202ENST00000392959 IGLV1-44P01699 117 aa10.48□□□□□ -0.73
LCA5-202ENST00000392959 VWC2Q2TAL6 325 aa10.48□□□□□ -0.73
LCA5-202ENST00000392959 TMEM141Q96I45 108 aa10.48□□□□□ -0.73
LCA5-202ENST00000392959 VGLL1Q99990 258 aa10.48□□□□□ -0.73
LCA5-202ENST00000392959 SDHAF1A6NFY7 115 aa10.47□□□□□ -0.73
LCA5-202ENST00000392959 TEX36Q5VZQ5 186 aa10.47□□□□□ -0.73
LCA5-202ENST00000392959 C8orf86Q6ZUL3 223 aa10.47□□□□□ -0.73
LCA5-202ENST00000392959 MRPL35Q9NZE8 188 aaKnown RBP10.47□□□□□ -0.73
LCA5-202ENST00000392959 MSRB2Q9Y3D2 182 aa10.47□□□□□ -0.73
LCA5-202ENST00000392959 WDR81Q562E7 1941 aa10.47□□□□□ -0.73
LCA5-202ENST00000392959 K7EP13 123 aa10.47□□□□□ -0.73
LCA5-202ENST00000392959 NPYP01303 97 aa10.47□□□□□ -0.73
LCA5-202ENST00000392959 SPINK13Q1W4C9 94 aa10.47□□□□□ -0.73
LCA5-202ENST00000392959 ZC2HC1AQ96GY0 325 aa10.47□□□□□ -0.73
LCA5-202ENST00000392959 THSD7BQ9C0I4 1608 aa10.47□□□□□ -0.73
LCA5-202ENST00000392959 THAP8Q8NA92 274 aa10.46□□□□□ -0.73
LCA5-202ENST00000392959 DNAJC30Q96LL9 226 aa10.46□□□□□ -0.73
LCA5-202ENST00000392959 BVES-AS1Q5T3Y7 98 aa10.46□□□□□ -0.73
LCA5-202ENST00000392959 K7EM74 188 aa10.46□□□□□ -0.74
LCA5-202ENST00000392959 CEACAM8P31997 349 aaPredicted RBP10.46□□□□□ -0.74
LCA5-202ENST00000392959 GAGE1Q13065 139 aa10.46□□□□□ -0.74
LCA5-202ENST00000392959 KLF12Q9Y4X4 402 aa10.46□□□□□ -0.74
LCA5-202ENST00000392959 ZNF48Q96MX3 618 aaPredicted RBP10.45□□□□□ -0.74
LCA5-202ENST00000392959 SMIM2Q9BVW6 85 aa10.45□□□□□ -0.74
LCA5-202ENST00000392959 F8VRH5 84 aa10.45□□□□□ -0.74
LCA5-202ENST00000392959 RUSC1-AS1Q66K80 236 aa10.45□□□□□ -0.74
LCA5-202ENST00000392959 GAGE2AQ6NT46 116 aa10.45□□□□□ -0.74
LCA5-202ENST00000392959 K7EN84 100 aa10.45□□□□□ -0.74
LCA5-202ENST00000392959 COA6Q5JTJ3 125 aaKnown RBP10.45□□□□□ -0.74
LCA5-202ENST00000392959 TRAV26-2A0A0B4J265 109 aa10.45□□□□□ -0.74
LCA5-202ENST00000392959 ASPHD1Q5U4P2 390 aa10.45□□□□□ -0.74
LCA5-202ENST00000392959 SLX1AQ9BQ83 275 aa10.45□□□□□ -0.74
LCA5-202ENST00000392959 PLXND1Q9Y4D7 1925 aa10.44□□□□□ -0.74
LCA5-202ENST00000392959 CHD3Q12873 2000 aaKnown RBP10.44□□□□□ -0.74
LCA5-202ENST00000392959 K7EP34 96 aa10.44□□□□□ -0.74
LCA5-202ENST00000392959 DIAPH2-AS1Q14236 149 aa10.44□□□□□ -0.74
LCA5-202ENST00000392959 ANXA2RQ3ZCQ2 193 aa10.44□□□□□ -0.74
LCA5-202ENST00000392959 PPDPFLQ8WWR9 84 aa10.44□□□□□ -0.74
LCA5-202ENST00000392959 TSSC4Q9Y5U2 329 aaPredicted RBP10.44□□□□□ -0.74
LCA5-202ENST00000392959 PRR30Q53SZ7 412 aaPredicted RBP10.44□□□□□ -0.74
LCA5-202ENST00000392959 I3L3M4 83 aa10.44□□□□□ -0.74
LCA5-202ENST00000392959 PYGO2Q9BRQ0 406 aa10.44□□□□□ -0.74
LCA5-202ENST00000392959 TNCP24821 2201 aa10.44□□□□□ -0.74
LCA5-202ENST00000392959 F8W1H4 67 aa10.43□□□□□ -0.74
LCA5-202ENST00000392959 DEFB130BP0DP73 79 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms