RNA–Protein interactions for RNA: ENST00000392811.6

SMARCD3-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 2,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-203ENST00000392811 USMG5Q96IX5 58 aa19.64■□□□□ 0.73
SMARCD3-203ENST00000392811 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP19.64■□□□□ 0.73
SMARCD3-203ENST00000392811 UNQ9165/PRO28630Q6UXU0 137 aa19.63■□□□□ 0.73
SMARCD3-203ENST00000392811 PF4V1P10720 104 aa19.63■□□□□ 0.73
SMARCD3-203ENST00000392811 IGHV3-11P01762 117 aa19.62■□□□□ 0.73
SMARCD3-203ENST00000392811 FAM181BA6NEQ2 426 aa19.61■□□□□ 0.73
SMARCD3-203ENST00000392811 GLMPQ8WWB7 406 aa19.61■□□□□ 0.73
SMARCD3-203ENST00000392811 VAMP8Q9BV40 100 aa19.61■□□□□ 0.73
SMARCD3-203ENST00000392811 NDUFA4O00483 81 aa19.61■□□□□ 0.73
SMARCD3-203ENST00000392811 RPS20P60866 119 aaKnown RBP19.61■□□□□ 0.73
SMARCD3-203ENST00000392811 CHCHD1Q96BP2 118 aaKnown RBP19.61■□□□□ 0.73
SMARCD3-203ENST00000392811 PAM16Q9Y3D7 125 aa19.61■□□□□ 0.73
SMARCD3-203ENST00000392811 LCNL1Q6ZST4 164 aa19.6■□□□□ 0.73
SMARCD3-203ENST00000392811 IL17RELQ6ZVW7 336 aa19.6■□□□□ 0.73
SMARCD3-203ENST00000392811 MAPK1IP1LQ8NDC0 245 aa19.6■□□□□ 0.73
SMARCD3-203ENST00000392811 MRPL53Q96EL3 112 aaKnown RBP19.6■□□□□ 0.73
SMARCD3-203ENST00000392811 TMEM213A2RRL7 107 aa19.59■□□□□ 0.73
SMARCD3-203ENST00000392811 IGLV1-40P01703 118 aa19.59■□□□□ 0.73
SMARCD3-203ENST00000392811 SSTP61278 116 aa19.59■□□□□ 0.73
SMARCD3-203ENST00000392811 ZNF493Q6ZR52 646 aa19.59■□□□□ 0.73
SMARCD3-203ENST00000392811 ZNF575Q86XF7 245 aa19.59■□□□□ 0.73
SMARCD3-203ENST00000392811 C20orf144Q9BQM9 153 aa19.59■□□□□ 0.73
SMARCD3-203ENST00000392811 AGPAT4-IT1Q9H0P7 198 aa19.59■□□□□ 0.73
SMARCD3-203ENST00000392811 SMAD7O15105 426 aaKnown RBP19.59■□□□□ 0.73
SMARCD3-203ENST00000392811 UBR5O95071 2799 aaPredicted RBP19.59■□□□□ 0.73
SMARCD3-203ENST00000392811 DEFB112Q30KQ8 113 aa19.59■□□□□ 0.73
SMARCD3-203ENST00000392811 EBLN2Q6P2I7 272 aa19.59■□□□□ 0.73
SMARCD3-203ENST00000392811 FBN2P35556 2912 aa19.58■□□□□ 0.73
SMARCD3-203ENST00000392811 FABP5P3A8MUU1 101 aa19.58■□□□□ 0.73
SMARCD3-203ENST00000392811 SRSF2Q01130 221 aaKnown RBP19.58■□□□□ 0.73
SMARCD3-203ENST00000392811 PMCHL1Q16048 86 aa19.58■□□□□ 0.73
SMARCD3-203ENST00000392811 OR4X2Q8NGF9 303 aa19.58■□□□□ 0.73
SMARCD3-203ENST00000392811 FAM208BQ5VWN6 2430 aa19.58■□□□□ 0.72
SMARCD3-203ENST00000392811 MUC21A0A0G2JKD1 596 aa19.58■□□□□ 0.72
SMARCD3-203ENST00000392811 MUC21A0A140T8X8 626 aa19.58■□□□□ 0.72
SMARCD3-203ENST00000392811 IGHV4-59P01825 116 aa19.58■□□□□ 0.72
SMARCD3-203ENST00000392811 LINC00614P0C842 121 aa19.58■□□□□ 0.72
SMARCD3-203ENST00000392811 CTRLP40313 264 aa19.58■□□□□ 0.72
SMARCD3-203ENST00000392811 CFHR3Q02985 330 aa19.58■□□□□ 0.72
SMARCD3-203ENST00000392811 MUC21Q5SSG8 566 aa19.58■□□□□ 0.72
SMARCD3-203ENST00000392811 FER1L6-AS1Q8NA97 138 aa19.58■□□□□ 0.72
SMARCD3-203ENST00000392811 ORM1P02763 201 aa19.57■□□□□ 0.72
SMARCD3-203ENST00000392811 IGLC6P0CF74 106 aa19.57■□□□□ 0.72
SMARCD3-203ENST00000392811 ANKRD17O75179 2603 aaKnown RBP19.56■□□□□ 0.72
SMARCD3-203ENST00000392811 TGFAP01135 160 aa19.56■□□□□ 0.72
SMARCD3-203ENST00000392811 ZNF138P52744 262 aa19.56■□□□□ 0.72
SMARCD3-203ENST00000392811 C16orf92Q96LL3 132 aa19.56■□□□□ 0.72
SMARCD3-203ENST00000392811 PSMG3-AS1Q96PY0 264 aa19.56■□□□□ 0.72
SMARCD3-203ENST00000392811 CSMD2Q7Z408 3487 aa19.56■□□□□ 0.72
SMARCD3-203ENST00000392811 IGHV1-24A0A0C4DH33 117 aa19.56■□□□□ 0.72
SMARCD3-203ENST00000392811 J3QLI3 93 aa19.56■□□□□ 0.72
SMARCD3-203ENST00000392811 CLEC5AQ9NY25 188 aa19.56■□□□□ 0.72
SMARCD3-203ENST00000392811 C2orf70A6NJV1 201 aa19.55■□□□□ 0.72
SMARCD3-203ENST00000392811 TMEM95Q3KNT9 176 aa19.55■□□□□ 0.72
SMARCD3-203ENST00000392811 KRTAP10-9P60411 292 aa19.54■□□□□ 0.72
SMARCD3-203ENST00000392811 TMEM78Q5T7P6 136 aa19.54■□□□□ 0.72
SMARCD3-203ENST00000392811 LRRK2Q5S007 2527 aa19.54■□□□□ 0.72
SMARCD3-203ENST00000392811 A0A0G2JLM5 398 aa19.54■□□□□ 0.72
SMARCD3-203ENST00000392811 CSN3P07498 182 aa19.54■□□□□ 0.72
SMARCD3-203ENST00000392811 RNF223E7ERA6 249 aa19.53■□□□□ 0.72
SMARCD3-203ENST00000392811 BTF3P20290 206 aaKnown RBP19.53■□□□□ 0.72
SMARCD3-203ENST00000392811 LINC01559Q495D7 138 aa19.53■□□□□ 0.72
SMARCD3-203ENST00000392811 C9orf47Q6ZRZ4 202 aa19.53■□□□□ 0.72
SMARCD3-203ENST00000392811 C9orf139Q6ZV77 190 aa19.53■□□□□ 0.72
SMARCD3-203ENST00000392811 GPHB5Q86YW7 130 aa19.53■□□□□ 0.72
SMARCD3-203ENST00000392811 NPFFR1Q9GZQ6 430 aa19.53■□□□□ 0.72
SMARCD3-203ENST00000392811 CSPG4Q6UVK1 2322 aa19.53■□□□□ 0.72
SMARCD3-203ENST00000392811 FAM104BQ5XKR9 115 aa19.52■□□□□ 0.72
SMARCD3-203ENST00000392811 AMN1Q8IY45 258 aa19.52■□□□□ 0.72
SMARCD3-203ENST00000392811 C20orf173Q96LM9 149 aa19.52■□□□□ 0.72
SMARCD3-203ENST00000392811 LOXL1Q08397 574 aaPredicted RBP19.52■□□□□ 0.72
SMARCD3-203ENST00000392811 ZNF580Q9UK33 172 aa19.52■□□□□ 0.72
SMARCD3-203ENST00000392811 TWIST1Q15672 202 aa19.51■□□□□ 0.71
SMARCD3-203ENST00000392811 DMRTA1Q5VZB9 504 aa19.51■□□□□ 0.71
SMARCD3-203ENST00000392811 POLQO75417 2590 aa19.51■□□□□ 0.71
SMARCD3-203ENST00000392811 MIEN1Q9BRT3 115 aa19.51■□□□□ 0.71
SMARCD3-203ENST00000392811 U3KQK5 164 aa19.5■□□□□ 0.71
SMARCD3-203ENST00000392811 D6R8Y8 96 aa19.49■□□□□ 0.71
SMARCD3-203ENST00000392811 HIST1H1AQ02539 215 aaPredicted RBP19.49■□□□□ 0.71
SMARCD3-203ENST00000392811 SPATA45Q537H7 98 aa19.49■□□□□ 0.71
SMARCD3-203ENST00000392811 LINC00173Q6ZV60 143 aa19.49■□□□□ 0.71
SMARCD3-203ENST00000392811 ATOH7Q8N100 152 aa19.49■□□□□ 0.71
SMARCD3-203ENST00000392811 ZNF738Q8NE65 137 aa19.49■□□□□ 0.71
SMARCD3-203ENST00000392811 C11orf21Q9P2W6 132 aa19.49■□□□□ 0.71
SMARCD3-203ENST00000392811 RAB4AP20338 218 aa19.49■□□□□ 0.71
SMARCD3-203ENST00000392811 PPP1R14DQ9NXH3 145 aa19.49■□□□□ 0.71
SMARCD3-203ENST00000392811 USP9YO00507 2555 aaPredicted RBP19.48■□□□□ 0.71
SMARCD3-203ENST00000392811 IGKV3D-20A0A0C4DH25 116 aa19.48■□□□□ 0.71
SMARCD3-203ENST00000392811 SOCS3O14543 225 aa19.48■□□□□ 0.71
SMARCD3-203ENST00000392811 LEPROTL1O95214 131 aa19.48■□□□□ 0.71
SMARCD3-203ENST00000392811 MRPL51Q4U2R6 128 aaKnown RBP19.48■□□□□ 0.71
SMARCD3-203ENST00000392811 ZNF705AQ6ZN79 300 aaPredicted RBP19.48■□□□□ 0.71
SMARCD3-203ENST00000392811 SPATA12Q7Z6I5 190 aa19.48■□□□□ 0.71
SMARCD3-203ENST00000392811 TMEM70Q9BUB7 260 aa19.48■□□□□ 0.71
SMARCD3-203ENST00000392811 IGHV4-31P0DP07 118 aa19.47■□□□□ 0.71
SMARCD3-203ENST00000392811 TM4SF20Q53R12 229 aa19.47■□□□□ 0.71
SMARCD3-203ENST00000392811 CNFNQ9BYD5 112 aa19.47■□□□□ 0.71
SMARCD3-203ENST00000392811 EREGO14944 169 aa19.47■□□□□ 0.71
SMARCD3-203ENST00000392811 MSRB1Q9NZV6 116 aa19.47■□□□□ 0.71
SMARCD3-203ENST00000392811 IGHV7-4-1A0A0J9YVY3 117 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms