RNA–Protein interactions for RNA: ENST00000384254.1

RNU6-40P-201, Transcript of RNA, U6 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6-40P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-40P-201ENST00000384254 TMEM35BQ8NCS4 154 aa1.36□□□□□ -2.19
RNU6-40P-201ENST00000384254 CCL4L1Q8NHW4 92 aa1.36□□□□□ -2.19
RNU6-40P-201ENST00000384254 MED12Q93074 2177 aa1.35□□□□□ -2.19
RNU6-40P-201ENST00000384254 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.35□□□□□ -2.19
RNU6-40P-201ENST00000384254 C3orf85A0A1B0GTC6 90 aa1.35□□□□□ -2.19
RNU6-40P-201ENST00000384254 H0YJX3 145 aa1.35□□□□□ -2.19
RNU6-40P-201ENST00000384254 SAA1P0DJI8 122 aaPredicted RBP1.35□□□□□ -2.19
RNU6-40P-201ENST00000384254 AP1S3Q96PC3 154 aa1.35□□□□□ -2.19
RNU6-40P-201ENST00000384254 TAF9BQ9HBM6 251 aa1.35□□□□□ -2.19
RNU6-40P-201ENST00000384254 COL1A1P02452 1464 aaPredicted RBP1.35□□□□□ -2.19
RNU6-40P-201ENST00000384254 BCL9O00512 1426 aa1.34□□□□□ -2.19
RNU6-40P-201ENST00000384254 NEDD8Q15843 81 aa1.34□□□□□ -2.19
RNU6-40P-201ENST00000384254 GLIPR1L1Q6UWM5 242 aa1.34□□□□□ -2.19
RNU6-40P-201ENST00000384254 CLEC2BQ92478 149 aa1.34□□□□□ -2.19
RNU6-40P-201ENST00000384254 ZFC3H1O60293 1989 aaKnown RBP1.34□□□□□ -2.2
RNU6-40P-201ENST00000384254 ERBINQ96RT1 1412 aa1.33□□□□□ -2.2
RNU6-40P-201ENST00000384254 TRBV7-6A0A0J9YX20 115 aa1.33□□□□□ -2.2
RNU6-40P-201ENST00000384254 LOC107986453A0A1B0GWG9 222 aa1.33□□□□□ -2.2
RNU6-40P-201ENST00000384254 GNG14A0A1W2PPG7 69 aa1.33□□□□□ -2.2
RNU6-40P-201ENST00000384254 RPL7P18124 248 aaKnown RBP1.33□□□□□ -2.2
RNU6-40P-201ENST00000384254 B2MP61769 119 aa1.33□□□□□ -2.2
RNU6-40P-201ENST00000384254 PRB3Q04118 309 aaPredicted RBP1.33□□□□□ -2.2
RNU6-40P-201ENST00000384254 CCDC115Q96NT0 180 aa1.33□□□□□ -2.2
RNU6-40P-201ENST00000384254 CIB3Q96Q77 187 aaPredicted RBP1.33□□□□□ -2.2
RNU6-40P-201ENST00000384254 MRPL40Q9NQ50 206 aaKnown RBP1.33□□□□□ -2.2
RNU6-40P-201ENST00000384254 HSPB11Q9Y547 144 aa1.33□□□□□ -2.2
RNU6-40P-201ENST00000384254 DLC1Q96QB1 1528 aa1.33□□□□□ -2.2
RNU6-40P-201ENST00000384254 OCIAD2Q56VL3 154 aa1.32□□□□□ -2.2
RNU6-40P-201ENST00000384254 NIT2Q9NQR4 276 aa1.32□□□□□ -2.2
RNU6-40P-201ENST00000384254 PTPRDP23468 1912 aa1.31□□□□□ -2.2
RNU6-40P-201ENST00000384254 TANC2Q9HCD6 1990 aa1.31□□□□□ -2.2
RNU6-40P-201ENST00000384254 PHRF1Q9P1Y6 1649 aaKnown RBP1.31□□□□□ -2.2
RNU6-40P-201ENST00000384254 ARL5CA6NH57 179 aa1.31□□□□□ -2.2
RNU6-40P-201ENST00000384254 BBIP1A8MTZ0 92 aa1.31□□□□□ -2.2
RNU6-40P-201ENST00000384254 SULT1C4O75897 302 aa1.31□□□□□ -2.2
RNU6-40P-201ENST00000384254 CD14P08571 375 aa1.31□□□□□ -2.2
RNU6-40P-201ENST00000384254 ZCCHC23Q6ZST2 131 aa1.31□□□□□ -2.2
RNU6-40P-201ENST00000384254 C5orf17Q8NAS9 161 aa1.31□□□□□ -2.2
RNU6-40P-201ENST00000384254 MORN4Q8NDC4 146 aa1.31□□□□□ -2.2
RNU6-40P-201ENST00000384254 NDUFAF1Q9Y375 327 aa1.31□□□□□ -2.2
RNU6-40P-201ENST00000384254 ASCC3Q8N3C0 2202 aaKnown RBP1.31□□□□□ -2.2
RNU6-40P-201ENST00000384254 A2MP01023 1474 aa1.31□□□□□ -2.2
RNU6-40P-201ENST00000384254 LOC107984156A0A0G2JMH3 177 aa1.3□□□□□ -2.2
RNU6-40P-201ENST00000384254 A0A0J9YY99 117 aa1.3□□□□□ -2.2
RNU6-40P-201ENST00000384254 PRORSD1PA6NEY8 169 aa1.3□□□□□ -2.2
RNU6-40P-201ENST00000384254 CRYGSP22914 178 aa1.3□□□□□ -2.2
RNU6-40P-201ENST00000384254 FXYD4P59646 89 aa1.3□□□□□ -2.2
RNU6-40P-201ENST00000384254 ARL17AQ8IVW1 177 aa1.3□□□□□ -2.2
RNU6-40P-201ENST00000384254 TMEM229BQ8NBD8 167 aa1.3□□□□□ -2.2
RNU6-40P-201ENST00000384254 CBLN4Q9NTU7 201 aa1.3□□□□□ -2.2
RNU6-40P-201ENST00000384254 TCOF1Q13428 1488 aaKnown RBP1.3□□□□□ -2.2
RNU6-40P-201ENST00000384254 CNTRLQ7Z7A1 2325 aa1.29□□□□□ -2.2
RNU6-40P-201ENST00000384254 LOC107984640A0A0U1RRK4 108 aa1.29□□□□□ -2.2
RNU6-40P-201ENST00000384254 FOXA3P55318 350 aaPredicted RBP1.29□□□□□ -2.2
RNU6-40P-201ENST00000384254 DR1Q01658 176 aa1.29□□□□□ -2.2
RNU6-40P-201ENST00000384254 C3orf62Q6ZUJ4 267 aa1.29□□□□□ -2.2
RNU6-40P-201ENST00000384254 SBSPONQ8IVN8 264 aa1.29□□□□□ -2.2
RNU6-40P-201ENST00000384254 BRK1Q8WUW1 75 aa1.29□□□□□ -2.2
RNU6-40P-201ENST00000384254 FKBP11Q9NYL4 201 aa1.29□□□□□ -2.2
RNU6-40P-201ENST00000384254 GINS2Q9Y248 185 aa1.29□□□□□ -2.2
RNU6-40P-201ENST00000384254 FCGBPQ9Y6R7 5405 aaPredicted RBP1.29□□□□□ -2.2
RNU6-40P-201ENST00000384254 FANCMQ8IYD8 2048 aa1.28□□□□□ -2.2
RNU6-40P-201ENST00000384254 ETV6P41212 452 aa1.28□□□□□ -2.2
RNU6-40P-201ENST00000384254 DNAJB13P59910 316 aa1.28□□□□□ -2.2
RNU6-40P-201ENST00000384254 NABP2Q9BQ15 211 aa1.28□□□□□ -2.2
RNU6-40P-201ENST00000384254 LIMD2Q9BT23 127 aa1.28□□□□□ -2.2
RNU6-40P-201ENST00000384254 SPANXA1Q9NS26 97 aa1.28□□□□□ -2.2
RNU6-40P-201ENST00000384254 ZGRF1Q86YA3 2104 aa1.27□□□□□ -2.21
RNU6-40P-201ENST00000384254 TET1Q8NFU7 2136 aa1.27□□□□□ -2.21
RNU6-40P-201ENST00000384254 CITO14578 2027 aa1.27□□□□□ -2.21
RNU6-40P-201ENST00000384254 ZNF727A8MUV8 499 aa1.27□□□□□ -2.21
RNU6-40P-201ENST00000384254 M0QZK8 103 aa1.27□□□□□ -2.21
RNU6-40P-201ENST00000384254 RPS3P23396 243 aaKnown RBP eCLIP1.27□□□□□ -2.21
RNU6-40P-201ENST00000384254 RPL22P35268 128 aaKnown RBP1.27□□□□□ -2.21
RNU6-40P-201ENST00000384254 CCSMST1Q4G0I0 132 aa1.27□□□□□ -2.21
RNU6-40P-201ENST00000384254 IZUMO2Q6UXV1 221 aa1.27□□□□□ -2.21
RNU6-40P-201ENST00000384254 OR5A2Q8NGI9 324 aa1.27□□□□□ -2.21
RNU6-40P-201ENST00000384254 OR51A4Q8NGJ6 313 aa1.27□□□□□ -2.21
RNU6-40P-201ENST00000384254 MPC1Q9Y5U8 109 aa1.27□□□□□ -2.21
RNU6-40P-201ENST00000384254 TRBV30A0A0K0K1B3 111 aa1.26□□□□□ -2.21
RNU6-40P-201ENST00000384254 J3KT08 172 aa1.26□□□□□ -2.21
RNU6-40P-201ENST00000384254 SLC25A4P12235 298 aa1.26□□□□□ -2.21
RNU6-40P-201ENST00000384254 PDE6GP18545 87 aa1.26□□□□□ -2.21
RNU6-40P-201ENST00000384254 RPS28P62857 69 aaKnown RBP1.26□□□□□ -2.21
RNU6-40P-201ENST00000384254 BLCAPP62952 87 aa1.26□□□□□ -2.21
RNU6-40P-201ENST00000384254 Q6ZQY7 126 aa1.26□□□□□ -2.21
RNU6-40P-201ENST00000384254 TAC4Q86UU9 113 aa1.26□□□□□ -2.21
RNU6-40P-201ENST00000384254 TCTEX1D1Q8N7M0 179 aa1.26□□□□□ -2.21
RNU6-40P-201ENST00000384254 SPANXCQ9NY87 97 aa1.26□□□□□ -2.21
RNU6-40P-201ENST00000384254 FER1L6Q2WGJ9 1857 aa1.25□□□□□ -2.21
RNU6-40P-201ENST00000384254 A0A1W2PPB8 328 aa1.25□□□□□ -2.21
RNU6-40P-201ENST00000384254 A0A1W2PRS3 328 aa1.25□□□□□ -2.21
RNU6-40P-201ENST00000384254 IFITM5A6NNB3 132 aa1.25□□□□□ -2.21
RNU6-40P-201ENST00000384254 KIR3DP1A8MWS1 328 aa1.25□□□□□ -2.21
RNU6-40P-201ENST00000384254 GTF2A1P52655 376 aaPredicted RBP1.25□□□□□ -2.21
RNU6-40P-201ENST00000384254 C10orf111Q8N326 155 aa1.25□□□□□ -2.21
RNU6-40P-201ENST00000384254 SMIM7Q9BQ49 75 aa1.25□□□□□ -2.21
RNU6-40P-201ENST00000384254 FAM135BQ49AJ0 1406 aa1.24□□□□□ -2.21
RNU6-40P-201ENST00000384254 EDF1O60869 148 aaKnown RBP1.24□□□□□ -2.21
RNU6-40P-201ENST00000384254 IGHV3-30P01768 117 aa1.24□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms