RNA–Protein interactions for RNA: ENST00000381990.6

GPNMB-202, Transcript of glycoprotein nmb, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPNMB, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-202ENST00000381990 SMIM13P0DJ93 91 aa6.99□□□□□ -1.29
GPNMB-202ENST00000381990 CRIP1P50238 77 aa6.99□□□□□ -1.29
GPNMB-202ENST00000381990 VMO1Q7Z5L0 202 aa6.99□□□□□ -1.29
GPNMB-202ENST00000381990 BPESC1Q9GZL8 116 aa6.99□□□□□ -1.29
GPNMB-202ENST00000381990 USP9XQ93008 2570 aaPredicted RBP6.99□□□□□ -1.29
GPNMB-202ENST00000381990 TACC2O95359 2948 aa6.99□□□□□ -1.29
GPNMB-202ENST00000381990 FLNCQ14315 2725 aa6.99□□□□□ -1.29
GPNMB-202ENST00000381990 I3L2K1 104 aa6.99□□□□□ -1.29
GPNMB-202ENST00000381990 FAM106CPP0CH98 169 aa6.99□□□□□ -1.29
GPNMB-202ENST00000381990 LMO4P61968 165 aa6.99□□□□□ -1.29
GPNMB-202ENST00000381990 LOXL1Q08397 574 aaPredicted RBP6.99□□□□□ -1.29
GPNMB-202ENST00000381990 FAM106AQ4KMX7 169 aa6.99□□□□□ -1.29
GPNMB-202ENST00000381990 CFHR4Q92496 578 aa6.99□□□□□ -1.29
GPNMB-202ENST00000381990 TPPP3Q9BW30 176 aa6.99□□□□□ -1.29
GPNMB-202ENST00000381990 SIRPDQ9H106 197 aa6.99□□□□□ -1.29
GPNMB-202ENST00000381990 HILPDAQ9Y5L2 63 aa6.99□□□□□ -1.29
GPNMB-202ENST00000381990 MED13LQ71F56 2210 aa6.99□□□□□ -1.29
GPNMB-202ENST00000381990 ZFYVE26Q68DK2 2539 aa6.99□□□□□ -1.29
GPNMB-202ENST00000381990 LOC389332A0A1B0GUA5 103 aa6.98□□□□□ -1.29
GPNMB-202ENST00000381990 OOSP1A8MZH6 123 aa6.98□□□□□ -1.29
GPNMB-202ENST00000381990 TEX22C9J3V5 150 aa6.98□□□□□ -1.29
GPNMB-202ENST00000381990 IGHV4-39P01824 125 aa6.98□□□□□ -1.29
GPNMB-202ENST00000381990 S100A7P31151 101 aa6.98□□□□□ -1.29
GPNMB-202ENST00000381990 SAMD5Q5TGI4 173 aa6.98□□□□□ -1.29
GPNMB-202ENST00000381990 LYZL1Q6UWQ5 148 aa6.98□□□□□ -1.29
GPNMB-202ENST00000381990 FBXL15Q9H469 300 aa6.98□□□□□ -1.29
GPNMB-202ENST00000381990 AAMDCQ9H7C9 122 aa6.98□□□□□ -1.29
GPNMB-202ENST00000381990 MYO18BQ8IUG5 2567 aa6.98□□□□□ -1.29
GPNMB-202ENST00000381990 LINC01546A6NGU7 62 aa6.98□□□□□ -1.29
GPNMB-202ENST00000381990 IGKV1-17P01599 117 aa6.98□□□□□ -1.29
GPNMB-202ENST00000381990 NMUP48645 174 aa6.98□□□□□ -1.29
GPNMB-202ENST00000381990 MRPL51Q4U2R6 128 aaKnown RBP6.98□□□□□ -1.29
GPNMB-202ENST00000381990 MINOS1Q5TGZ0 78 aa6.98□□□□□ -1.29
GPNMB-202ENST00000381990 CCDC144NLQ6NUI1 221 aa6.98□□□□□ -1.29
GPNMB-202ENST00000381990 AMN1Q8IY45 258 aa6.98□□□□□ -1.29
GPNMB-202ENST00000381990 SPOCK3Q9BQ16 436 aa6.98□□□□□ -1.29
GPNMB-202ENST00000381990 MINOS1-NBL1R4GNA1 71 aa6.98□□□□□ -1.29
GPNMB-202ENST00000381990 IGHV3-21A0A0B4J1V1 117 aa6.97□□□□□ -1.29
GPNMB-202ENST00000381990 HLA-DRB4P13762 266 aa6.97□□□□□ -1.29
GPNMB-202ENST00000381990 CKS2P33552 79 aa6.97□□□□□ -1.29
GPNMB-202ENST00000381990 RAB37Q96AX2 223 aa6.97□□□□□ -1.29
GPNMB-202ENST00000381990 HLA-DRB4X5D2U9 266 aa6.97□□□□□ -1.29
GPNMB-202ENST00000381990 A0A1W2PRD5 423 aa6.97□□□□□ -1.29
GPNMB-202ENST00000381990 A0A1W2PRF3 423 aa6.97□□□□□ -1.29
GPNMB-202ENST00000381990 A0A1W2PRM7 423 aa6.97□□□□□ -1.29
GPNMB-202ENST00000381990 PCP2Q8IVA1 136 aa6.97□□□□□ -1.29
GPNMB-202ENST00000381990 BBC3Q96PG8 261 aaPredicted RBP6.97□□□□□ -1.29
GPNMB-202ENST00000381990 CCL19Q99731 98 aa6.97□□□□□ -1.29
GPNMB-202ENST00000381990 ZMAT4Q9H898 229 aa6.97□□□□□ -1.29
GPNMB-202ENST00000381990 SMPXQ9UHP9 88 aa6.97□□□□□ -1.29
GPNMB-202ENST00000381990 J3QR89 54 aa6.97□□□□□ -1.29
GPNMB-202ENST00000381990 NDUFS8O00217 210 aa6.97□□□□□ -1.29
GPNMB-202ENST00000381990 MRPS12O15235 138 aaKnown RBP6.97□□□□□ -1.29
GPNMB-202ENST00000381990 NBR2O15453 112 aa6.97□□□□□ -1.29
GPNMB-202ENST00000381990 NDUFA3O95167 84 aa6.97□□□□□ -1.29
GPNMB-202ENST00000381990 PRB1P04280 392 aa6.97□□□□□ -1.29
GPNMB-202ENST00000381990 NPBQ8NG41 125 aa6.97□□□□□ -1.29
GPNMB-202ENST00000381990 RNF125Q96EQ8 232 aa6.97□□□□□ -1.29
GPNMB-202ENST00000381990 TMEM213A2RRL7 107 aa6.96□□□□□ -1.3
GPNMB-202ENST00000381990 SRSF2Q01130 221 aaKnown RBP6.96□□□□□ -1.3
GPNMB-202ENST00000381990 SRSF1Q07955 248 aaKnown RBP eCLIP6.96□□□□□ -1.3
GPNMB-202ENST00000381990 SAMD13Q5VXD3 122 aa6.96□□□□□ -1.3
GPNMB-202ENST00000381990 Q71RC1 249 aaPredicted RBP6.96□□□□□ -1.3
GPNMB-202ENST00000381990 MAP1LC3AQ9H492 121 aa6.96□□□□□ -1.3
GPNMB-202ENST00000381990 SH2D1AO60880 128 aa6.96□□□□□ -1.3
GPNMB-202ENST00000381990 APELAP0DMC3 54 aa6.96□□□□□ -1.3
GPNMB-202ENST00000381990 TMEM11P17152 192 aa6.96□□□□□ -1.3
GPNMB-202ENST00000381990 BMI1P35226 326 aa6.96□□□□□ -1.3
GPNMB-202ENST00000381990 ZNF491Q8N8L2 437 aa6.96□□□□□ -1.3
GPNMB-202ENST00000381990 C17orf77Q96MU5 243 aa6.96□□□□□ -1.3
GPNMB-202ENST00000381990 VGLL1Q99990 258 aa6.96□□□□□ -1.3
GPNMB-202ENST00000381990 NXT2Q9NPJ8 142 aaKnown RBP6.96□□□□□ -1.3
GPNMB-202ENST00000381990 ZNF462Q96JM2 2506 aa6.96□□□□□ -1.3
GPNMB-202ENST00000381990 F8W1H4 67 aa6.95□□□□□ -1.3
GPNMB-202ENST00000381990 CNIH1O95406 144 aa6.95□□□□□ -1.3
GPNMB-202ENST00000381990 UBE2E1P51965 193 aa6.95□□□□□ -1.3
GPNMB-202ENST00000381990 HES1Q14469 280 aa6.95□□□□□ -1.3
GPNMB-202ENST00000381990 BCL6BQ8N143 479 aaPredicted RBP6.95□□□□□ -1.3
GPNMB-202ENST00000381990 DYNAPQ8N1N2 210 aa6.95□□□□□ -1.3
GPNMB-202ENST00000381990 ZNF843Q8N446 348 aa6.95□□□□□ -1.3
GPNMB-202ENST00000381990 PIMREGQ9BSJ6 248 aa6.95□□□□□ -1.3
GPNMB-202ENST00000381990 TM2D2Q9BX73 214 aa6.95□□□□□ -1.3
GPNMB-202ENST00000381990 CNFNQ9BYD5 112 aa6.95□□□□□ -1.3
GPNMB-202ENST00000381990 WI2-2373I1.2A0A1W2PRP0 233 aa6.95□□□□□ -1.3
GPNMB-202ENST00000381990 K7EIM0 57 aa6.95□□□□□ -1.3
GPNMB-202ENST00000381990 NPYP01303 97 aa6.95□□□□□ -1.3
GPNMB-202ENST00000381990 IL4P05112 153 aa6.95□□□□□ -1.3
GPNMB-202ENST00000381990 EVI2AP22794 236 aa6.95□□□□□ -1.3
GPNMB-202ENST00000381990 GCSHP23434 173 aa6.95□□□□□ -1.3
GPNMB-202ENST00000381990 FCER1GP30273 86 aa6.95□□□□□ -1.3
GPNMB-202ENST00000381990 EBI3Q14213 229 aa6.95□□□□□ -1.3
GPNMB-202ENST00000381990 C5orf64Q2M2E5 130 aa6.95□□□□□ -1.3
GPNMB-202ENST00000381990 C8orf49Q96NF6 230 aa6.95□□□□□ -1.3
GPNMB-202ENST00000381990 NAA38Q9BRA0 125 aaKnown RBP6.95□□□□□ -1.3
GPNMB-202ENST00000381990 CHAC1Q9BUX1 264 aa6.95□□□□□ -1.3
GPNMB-202ENST00000381990 DKK2Q9UBU2 259 aa6.95□□□□□ -1.3
GPNMB-202ENST00000381990 HHLA3Q9XRX5 114 aa6.95□□□□□ -1.3
GPNMB-202ENST00000381990 ATP5LO75964 103 aa6.94□□□□□ -1.3
GPNMB-202ENST00000381990 ODF1Q14990 250 aa6.94□□□□□ -1.3
GPNMB-202ENST00000381990 TWIST1Q15672 202 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms