RNA–Protein interactions for RNA: ENST00000381196.8

PTPRD-203, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-203ENST00000381196 C20orf173Q96LM9 149 aa3.99□□□□□ -1.77
PTPRD-203ENST00000381196 GFI1BQ5VTD9 330 aa3.99□□□□□ -1.77
PTPRD-203ENST00000381196 FAM104BQ5XKR9 115 aa3.99□□□□□ -1.77
PTPRD-203ENST00000381196 LCN12Q6JVE5 192 aa3.99□□□□□ -1.77
PTPRD-203ENST00000381196 GOLT1AQ6ZVE7 132 aa3.99□□□□□ -1.77
PTPRD-203ENST00000381196 LINC00305Q7Z4B0 112 aa3.99□□□□□ -1.77
PTPRD-203ENST00000381196 PGLYRP4Q96LB8 373 aa3.99□□□□□ -1.77
PTPRD-203ENST00000381196 SPSB2Q99619 263 aa3.99□□□□□ -1.77
PTPRD-203ENST00000381196 CENPEQ02224 2701 aa3.99□□□□□ -1.77
PTPRD-203ENST00000381196 B4DSR2 109 aa3.99□□□□□ -1.77
PTPRD-203ENST00000381196 SP5Q6BEB4 398 aaPredicted RBP3.99□□□□□ -1.77
PTPRD-203ENST00000381196 BMPERQ8N8U9 685 aa3.99□□□□□ -1.77
PTPRD-203ENST00000381196 PRADC1Q9BSG0 188 aa3.99□□□□□ -1.77
PTPRD-203ENST00000381196 PRO1854Q9UHT4 67 aa3.99□□□□□ -1.77
PTPRD-203ENST00000381196 IGKV3-15P01624 115 aa3.99□□□□□ -1.77
PTPRD-203ENST00000381196 WNT10AQ9GZT5 417 aa3.99□□□□□ -1.77
PTPRD-203ENST00000381196 TOMM7Q9P0U1 55 aa3.99□□□□□ -1.77
PTPRD-203ENST00000381196 RFNGQ9Y644 331 aa3.99□□□□□ -1.77
PTPRD-203ENST00000381196 SDHAF1A6NFY7 115 aa3.99□□□□□ -1.77
PTPRD-203ENST00000381196 DUSP14O95147 198 aaKnown RBP3.99□□□□□ -1.77
PTPRD-203ENST00000381196 RPS28P62857 69 aaKnown RBP3.99□□□□□ -1.77
PTPRD-203ENST00000381196 C11orf44Q8N8P7 122 aa3.99□□□□□ -1.77
PTPRD-203ENST00000381196 KLF14Q8TD94 323 aaPredicted RBP3.99□□□□□ -1.77
PTPRD-203ENST00000381196 ADAMTS20P59510 1910 aa3.99□□□□□ -1.77
PTPRD-203ENST00000381196 IGKV1D-16P01601 117 aa3.99□□□□□ -1.77
PTPRD-203ENST00000381196 CRYGCP07315 174 aa3.99□□□□□ -1.77
PTPRD-203ENST00000381196 FXYD3Q14802 87 aa3.99□□□□□ -1.77
PTPRD-203ENST00000381196 CRIPAKQ8N1N5 446 aa3.99□□□□□ -1.77
PTPRD-203ENST00000381196 LINC00477Q96M19 166 aa3.99□□□□□ -1.77
PTPRD-203ENST00000381196 PPDPFQ9H3Y8 114 aa3.99□□□□□ -1.77
PTPRD-203ENST00000381196 GLRXP35754 106 aa3.98□□□□□ -1.77
PTPRD-203ENST00000381196 C2orf82Q6UX34 121 aa3.98□□□□□ -1.77
PTPRD-203ENST00000381196 EFNA4P52798 201 aa3.98□□□□□ -1.77
PTPRD-203ENST00000381196 PSG4Q00888 419 aa3.98□□□□□ -1.77
PTPRD-203ENST00000381196 ZNF329Q86UD4 541 aa3.98□□□□□ -1.77
PTPRD-203ENST00000381196 TMEM167AQ8TBQ9 72 aa3.98□□□□□ -1.77
PTPRD-203ENST00000381196 SRSF12Q8WXF0 261 aaKnown RBP3.98□□□□□ -1.77
PTPRD-203ENST00000381196 FNDC4Q9H6D8 234 aaPredicted RBP3.98□□□□□ -1.77
PTPRD-203ENST00000381196 DPM3Q9P2X0 92 aa3.98□□□□□ -1.77
PTPRD-203ENST00000381196 FBXL7Q9UJT9 491 aa3.98□□□□□ -1.77
PTPRD-203ENST00000381196 Q8TCH9 128 aa3.98□□□□□ -1.77
PTPRD-203ENST00000381196 TRGV2A0A075B6R0 118 aa3.98□□□□□ -1.77
PTPRD-203ENST00000381196 HIST1H4AP62805 103 aaKnown RBP3.98□□□□□ -1.77
PTPRD-203ENST00000381196 HERV-K104P63124 156 aa3.98□□□□□ -1.77
PTPRD-203ENST00000381196 ZNF826PQ6ZT77 177 aa3.98□□□□□ -1.77
PTPRD-203ENST00000381196 DAND5Q8N907 189 aa3.98□□□□□ -1.77
PTPRD-203ENST00000381196 C10orf105Q8TEF2 133 aa3.98□□□□□ -1.77
PTPRD-203ENST00000381196 FOXI1Q12951 378 aa3.98□□□□□ -1.77
PTPRD-203ENST00000381196 WIPF3A6NGB9 483 aa3.98□□□□□ -1.77
PTPRD-203ENST00000381196 TNFRSF6BO95407 300 aa3.98□□□□□ -1.77
PTPRD-203ENST00000381196 ZIC4Q8N9L1 334 aa3.98□□□□□ -1.77
PTPRD-203ENST00000381196 ZFP36L1Q07352 338 aaKnown RBP3.98□□□□□ -1.77
PTPRD-203ENST00000381196 STPG4Q8N801 248 aa3.98□□□□□ -1.77
PTPRD-203ENST00000381196 GATD1Q8NB37 220 aa3.98□□□□□ -1.77
PTPRD-203ENST00000381196 RASL10AQ92737 203 aa3.98□□□□□ -1.77
PTPRD-203ENST00000381196 HCP5Q6MZN7 132 aa3.97□□□□□ -1.77
PTPRD-203ENST00000381196 C8orf86Q6ZUL3 223 aa3.97□□□□□ -1.77
PTPRD-203ENST00000381196 LINC00643Q86TS7 51 aa3.97□□□□□ -1.77
PTPRD-203ENST00000381196 KLK15Q9H2R5 256 aa3.97□□□□□ -1.77
PTPRD-203ENST00000381196 PSG8Q9UQ74 426 aa3.97□□□□□ -1.77
PTPRD-203ENST00000381196 A0A0B4J2C4 111 aa3.97□□□□□ -1.77
PTPRD-203ENST00000381196 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.97□□□□□ -1.77
PTPRD-203ENST00000381196 NPIPB5A8MRT5 1133 aa3.97□□□□□ -1.77
PTPRD-203ENST00000381196 SAP30O75446 220 aa3.97□□□□□ -1.77
PTPRD-203ENST00000381196 CECR9P0C854 216 aa3.97□□□□□ -1.77
PTPRD-203ENST00000381196 PAX9P55771 341 aa3.97□□□□□ -1.77
PTPRD-203ENST00000381196 NDUFV3P56181 108 aaKnown RBP3.97□□□□□ -1.77
PTPRD-203ENST00000381196 KRTAP27-1Q3LI81 207 aa3.97□□□□□ -1.77
PTPRD-203ENST00000381196 C11orf1Q9H5F2 150 aa3.97□□□□□ -1.77
PTPRD-203ENST00000381196 H3BUA1 57 aa3.97□□□□□ -1.77
PTPRD-203ENST00000381196 TIMM17BO60830 172 aa3.97□□□□□ -1.77
PTPRD-203ENST00000381196 LILRA1O75019 489 aa3.97□□□□□ -1.77
PTPRD-203ENST00000381196 CTRLP40313 264 aa3.97□□□□□ -1.77
PTPRD-203ENST00000381196 FOXA3P55318 350 aaPredicted RBP3.97□□□□□ -1.77
PTPRD-203ENST00000381196 SHANK2-AS3Q9BTD1 123 aa3.97□□□□□ -1.77
PTPRD-203ENST00000381196 TEX36Q5VZQ5 186 aa3.97□□□□□ -1.77
PTPRD-203ENST00000381196 TMEM52Q8NDY8 209 aa3.97□□□□□ -1.77
PTPRD-203ENST00000381196 A0A087WX48 190 aa3.97□□□□□ -1.77
PTPRD-203ENST00000381196 K7EM74 188 aa3.97□□□□□ -1.77
PTPRD-203ENST00000381196 FSTL3O95633 263 aa3.97□□□□□ -1.77
PTPRD-203ENST00000381196 TSSC4Q9Y5U2 329 aaPredicted RBP3.97□□□□□ -1.77
PTPRD-203ENST00000381196 PTPRSQ13332 1948 aa3.97□□□□□ -1.77
PTPRD-203ENST00000381196 FAM223BA6NKX1 122 aa3.97□□□□□ -1.77
PTPRD-203ENST00000381196 COL8A2P25067 703 aa3.97□□□□□ -1.77
PTPRD-203ENST00000381196 FAM223AQ8IWN6 122 aa3.97□□□□□ -1.77
PTPRD-203ENST00000381196 LSM4Q9Y4Z0 139 aaKnown RBP3.97□□□□□ -1.77
PTPRD-203ENST00000381196 CELA3AP09093 270 aa3.97□□□□□ -1.77
PTPRD-203ENST00000381196 NTF4P34130 210 aa3.97□□□□□ -1.77
PTPRD-203ENST00000381196 MINOS1Q5TGZ0 78 aa3.97□□□□□ -1.77
PTPRD-203ENST00000381196 MINOS1-NBL1R4GNA1 71 aa3.97□□□□□ -1.77
PTPRD-203ENST00000381196 IGHV4-39P01824 125 aa3.97□□□□□ -1.77
PTPRD-203ENST00000381196 C16orf54Q6UWD8 224 aa3.97□□□□□ -1.77
PTPRD-203ENST00000381196 SRXN1Q9BYN0 137 aa3.97□□□□□ -1.77
PTPRD-203ENST00000381196 TRBV7-1A0A0A6YYK4 115 aa3.96□□□□□ -1.77
PTPRD-203ENST00000381196 KNCNA6PVL3 124 aa3.96□□□□□ -1.77
PTPRD-203ENST00000381196 PRR32B1ATL7 298 aa3.96□□□□□ -1.77
PTPRD-203ENST00000381196 JMJD7-PLA2G4BH0Y9G9 81 aa3.96□□□□□ -1.77
PTPRD-203ENST00000381196 IGHV1-69P01742 117 aa3.96□□□□□ -1.77
PTPRD-203ENST00000381196 RNF125Q96EQ8 232 aa3.96□□□□□ -1.77
PTPRD-203ENST00000381196 PNRC2Q9NPJ4 139 aaKnown RBP3.96□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms