RNA–Protein interactions for RNA: ENST00000381018.7

TRIM23-203, Transcript of tripartite motif containing 23, humanhuman

TSL 1 (best) BASIC

Gene TRIM23, Length 1,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-203ENST00000381018 COX11Q9Y6N1 276 aa9.22□□□□□ -0.93
TRIM23-203ENST00000381018 TRBV7-1A0A0A6YYK4 115 aa9.21□□□□□ -0.93
TRIM23-203ENST00000381018 G3V318 75 aa9.21□□□□□ -0.93
TRIM23-203ENST00000381018 LOXL1Q08397 574 aaPredicted RBP9.21□□□□□ -0.93
TRIM23-203ENST00000381018 ERCC8Q13216 396 aa9.21□□□□□ -0.93
TRIM23-203ENST00000381018 ZNF738Q8NE65 137 aa9.21□□□□□ -0.93
TRIM23-203ENST00000381018 CLPSL1A2RUU4 121 aa9.21□□□□□ -0.94
TRIM23-203ENST00000381018 PRAC2D3DTV9 90 aa9.21□□□□□ -0.94
TRIM23-203ENST00000381018 NCR2O95944 276 aa9.21□□□□□ -0.94
TRIM23-203ENST00000381018 NHLH1Q02575 133 aa9.21□□□□□ -0.94
TRIM23-203ENST00000381018 LY6DQ14210 128 aa9.21□□□□□ -0.94
TRIM23-203ENST00000381018 MPV17L2Q567V2 206 aa9.21□□□□□ -0.94
TRIM23-203ENST00000381018 RNF182Q8N6D2 247 aa9.21□□□□□ -0.94
TRIM23-203ENST00000381018 OR8A1Q8NGG7 326 aa9.21□□□□□ -0.94
TRIM23-203ENST00000381018 METTL26Q96S19 204 aa9.21□□□□□ -0.94
TRIM23-203ENST00000381018 CNFNQ9BYD5 112 aa9.21□□□□□ -0.94
TRIM23-203ENST00000381018 CACNA1BQ00975 2339 aa9.21□□□□□ -0.94
TRIM23-203ENST00000381018 IGHV3-66A0A0C4DH42 116 aa9.2□□□□□ -0.94
TRIM23-203ENST00000381018 LINC01548A6NM66 108 aa9.2□□□□□ -0.94
TRIM23-203ENST00000381018 HBDP02042 147 aa9.2□□□□□ -0.94
TRIM23-203ENST00000381018 LINC01559Q495D7 138 aa9.2□□□□□ -0.94
TRIM23-203ENST00000381018 ZNF575Q86XF7 245 aa9.2□□□□□ -0.94
TRIM23-203ENST00000381018 C5orf56Q8N8D9 126 aa9.2□□□□□ -0.94
TRIM23-203ENST00000381018 SPTBN4Q9H254 2564 aa9.2□□□□□ -0.94
TRIM23-203ENST00000381018 CSMD1Q96PZ7 3565 aa9.19□□□□□ -0.94
TRIM23-203ENST00000381018 NUDT3O95989 172 aa9.19□□□□□ -0.94
TRIM23-203ENST00000381018 NPYP01303 97 aa9.19□□□□□ -0.94
TRIM23-203ENST00000381018 PPBPP02775 128 aa9.19□□□□□ -0.94
TRIM23-203ENST00000381018 SFTPCP11686 197 aa9.19□□□□□ -0.94
TRIM23-203ENST00000381018 C12orf54Q6X4T0 127 aa9.19□□□□□ -0.94
TRIM23-203ENST00000381018 IL17RELQ6ZVW7 336 aa9.19□□□□□ -0.94
TRIM23-203ENST00000381018 ITLN2Q8WWU7 325 aaPredicted RBP9.19□□□□□ -0.94
TRIM23-203ENST00000381018 MRPL53Q96EL3 112 aaKnown RBP9.19□□□□□ -0.94
TRIM23-203ENST00000381018 AKAP6Q13023 2319 aa9.19□□□□□ -0.94
TRIM23-203ENST00000381018 SMKR1H3BMG3 65 aa9.19□□□□□ -0.94
TRIM23-203ENST00000381018 TCF21O43680 179 aa9.19□□□□□ -0.94
TRIM23-203ENST00000381018 COX8AP10176 69 aa9.19□□□□□ -0.94
TRIM23-203ENST00000381018 HIST1H1AQ02539 215 aaPredicted RBP9.19□□□□□ -0.94
TRIM23-203ENST00000381018 PAX8Q06710 450 aa9.19□□□□□ -0.94
TRIM23-203ENST00000381018 PSMG3-AS1Q96PY0 264 aa9.19□□□□□ -0.94
TRIM23-203ENST00000381018 ABCA2Q9BZC7 2435 aa9.18□□□□□ -0.94
TRIM23-203ENST00000381018 ATP5G2Q06055 141 aa9.18□□□□□ -0.94
TRIM23-203ENST00000381018 LGALS9BQ3B8N2 356 aa9.18□□□□□ -0.94
TRIM23-203ENST00000381018 BVES-AS1Q5T3Y7 98 aa9.18□□□□□ -0.94
TRIM23-203ENST00000381018 LGALS9CQ6DKI2 356 aa9.18□□□□□ -0.94
TRIM23-203ENST00000381018 Q6ZVH6 145 aa9.18□□□□□ -0.94
TRIM23-203ENST00000381018 DPF1Q92782 380 aa9.18□□□□□ -0.94
TRIM23-203ENST00000381018 RNF185Q96GF1 192 aa9.18□□□□□ -0.94
TRIM23-203ENST00000381018 MAP1LC3AQ9H492 121 aa9.18□□□□□ -0.94
TRIM23-203ENST00000381018 MSRB1Q9NZV6 116 aa9.18□□□□□ -0.94
TRIM23-203ENST00000381018 MOB4Q9Y3A3 225 aa9.18□□□□□ -0.94
TRIM23-203ENST00000381018 IGHV3OR16-13A0A075B7E8 117 aa9.17□□□□□ -0.94
TRIM23-203ENST00000381018 IGHV3-74A0A0B4J1X5 117 aa9.17□□□□□ -0.94
TRIM23-203ENST00000381018 PTTG1IPP53801 180 aa9.17□□□□□ -0.94
TRIM23-203ENST00000381018 TMEM78Q5T7P6 136 aa9.17□□□□□ -0.94
TRIM23-203ENST00000381018 C8orf86Q6ZUL3 223 aa9.17□□□□□ -0.94
TRIM23-203ENST00000381018 ATP6V0BQ99437 205 aa9.17□□□□□ -0.94
TRIM23-203ENST00000381018 HIF1ANQ9NWT6 349 aa9.17□□□□□ -0.94
TRIM23-203ENST00000381018 IGHV3-49A0A0A0MS15 119 aa9.17□□□□□ -0.94
TRIM23-203ENST00000381018 TRAV8-2A0A0B4J237 113 aa9.17□□□□□ -0.94
TRIM23-203ENST00000381018 TRAV41A0A0B4J266 112 aa9.17□□□□□ -0.94
TRIM23-203ENST00000381018 FAM223BA6NKX1 122 aa9.17□□□□□ -0.94
TRIM23-203ENST00000381018 ZNF207O43670 478 aaKnown RBP9.17□□□□□ -0.94
TRIM23-203ENST00000381018 UBE2V1Q13404 147 aa9.17□□□□□ -0.94
TRIM23-203ENST00000381018 PRSS57Q6UWY2 283 aa9.17□□□□□ -0.94
TRIM23-203ENST00000381018 TMEM219Q86XT9 240 aa9.17□□□□□ -0.94
TRIM23-203ENST00000381018 FAM223AQ8IWN6 122 aa9.17□□□□□ -0.94
TRIM23-203ENST00000381018 IFI27L1Q96BM0 104 aa9.17□□□□□ -0.94
TRIM23-203ENST00000381018 NPFFR1Q9GZQ6 430 aa9.17□□□□□ -0.94
TRIM23-203ENST00000381018 AGPAT4-IT1Q9H0P7 198 aa9.17□□□□□ -0.94
TRIM23-203ENST00000381018 U3KQE9 123 aa9.17□□□□□ -0.94
TRIM23-203ENST00000381018 ASH1LQ9NR48 2969 aaKnown RBP9.17□□□□□ -0.94
TRIM23-203ENST00000381018 C19orf84I3L1E1 186 aa9.16□□□□□ -0.94
TRIM23-203ENST00000381018 CCL25O15444 150 aa9.16□□□□□ -0.94
TRIM23-203ENST00000381018 FXYD7P58549 80 aa9.16□□□□□ -0.94
TRIM23-203ENST00000381018 CACNG7P62955 275 aa9.16□□□□□ -0.94
TRIM23-203ENST00000381018 C19orf54Q5BKX5 351 aa9.16□□□□□ -0.94
TRIM23-203ENST00000381018 OR1N2Q8NGR9 330 aa9.16□□□□□ -0.94
TRIM23-203ENST00000381018 IGKV3D-20A0A0C4DH25 116 aa9.15□□□□□ -0.94
TRIM23-203ENST00000381018 LINC01546A6NGU7 62 aa9.15□□□□□ -0.94
TRIM23-203ENST00000381018 IGHV4-39P01824 125 aa9.15□□□□□ -0.94
TRIM23-203ENST00000381018 UQCRFS1P47985 274 aa9.15□□□□□ -0.94
TRIM23-203ENST00000381018 CRIP2P52943 208 aaPredicted RBP9.15□□□□□ -0.94
TRIM23-203ENST00000381018 C9orf47Q6ZRZ4 202 aa9.15□□□□□ -0.94
TRIM23-203ENST00000381018 DEFB125Q8N687 156 aa9.15□□□□□ -0.94
TRIM23-203ENST00000381018 NCOR2Q9Y618 2525 aa9.15□□□□□ -0.94
TRIM23-203ENST00000381018 IGHV3OR16-10A0A075B7F0 116 aa9.15□□□□□ -0.95
TRIM23-203ENST00000381018 IGHV1-69DA0A0B4J2H0 117 aa9.15□□□□□ -0.95
TRIM23-203ENST00000381018 IGHV1-69P01742 117 aa9.15□□□□□ -0.95
TRIM23-203ENST00000381018 PPIFP30405 207 aaKnown RBP9.15□□□□□ -0.95
TRIM23-203ENST00000381018 C2orf91Q6ZV80 131 aa9.15□□□□□ -0.95
TRIM23-203ENST00000381018 PRORYQ9H606 182 aa9.15□□□□□ -0.95
TRIM23-203ENST00000381018 NXT2Q9NPJ8 142 aaKnown RBP9.15□□□□□ -0.95
TRIM23-203ENST00000381018 C11orf21Q9P2W6 132 aa9.15□□□□□ -0.95
TRIM23-203ENST00000381018 TNFRSF6BO95407 300 aa9.14□□□□□ -0.95
TRIM23-203ENST00000381018 TRGV3P03979 118 aa9.14□□□□□ -0.95
TRIM23-203ENST00000381018 GNLYP22749 145 aa9.14□□□□□ -0.95
TRIM23-203ENST00000381018 ANKRD39Q53RE8 183 aa9.14□□□□□ -0.95
TRIM23-203ENST00000381018 PPP1R14DQ9NXH3 145 aa9.14□□□□□ -0.95
TRIM23-203ENST00000381018 CHD8Q9HCK8 2581 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms